I didn't add the line above because I'm not quite sure how. How do I edit the activate file? On Jan 12, 2015 8:03 PM, "Michael Joyce" <[email protected]> wrote:
> That is the virtualenv one. The anaconda one should be > /home/nic/climate/anaconda/bin/python. > Note that if you added that line above you will need to deactivate and > reactivate the virtualenv for it to take effect. > > If you want to test manually what I mentioned above you could try > > 0. Deactivate the virtualenv (just to be safe) > 1. initialize the virtualenv > 2. run `export PATH="/home/nic/climate/anaconda/bin/:$PATH"` > 3. run `which python` and see what you get > > > -- Joyce > > On Mon, Jan 12, 2015 at 7:55 PM, nic pederson <[email protected]> > wrote: > >> Which python produces ~/climate/easy/easy-ocw/ocw/bin/python >> On Jan 12, 2015 7:42 PM, "Michael Joyce" <[email protected]> wrote: >> >>> Ok not quite as confident now as I thought but try this. I think you >>> might be running into an annoying little bug and/or a gap in the >>> documentation here. Try adding this to the end of your ocw/bin/activate >>> file and see if that fixes this. >>> >>> >>> 1. export PATH=/home/nic/climate/anaconda/bin:$PATH >>> >>> >>> I think we're missing an export of a path in the install script when you >>> run a virtualenv and it's causing the wrong python to be called. You can >>> check by running "which python" and see if you get the anaconda one or the >>> virtualenv one. You want to be getting the anaconda one. Hopefully that's >>> the problem/solution. >>> >>> >>> -- Joyce >>> >>> On Mon, Jan 12, 2015 at 7:33 PM, Michael Joyce <[email protected]> wrote: >>> >>>> Ah ok I think I know what the problem is. One second to check and see. >>>> >>>> >>>> -- Joyce >>>> >>>> On Mon, Jan 12, 2015 at 7:25 PM, nic pederson <[email protected]> >>>> wrote: >>>> >>>>> Here is my bash >>>>> >>>>> Pastebin.com/7ULyyng3 >>>>> On Jan 12, 2015 7:12 PM, "Michael Joyce" <[email protected]> wrote: >>>>> >>>>>> Trying running source ocw/bin/activate from ~/climate/easy-ocw and >>>>>> see if that works >>>>>> >>>>>> >>>>>> -- Joyce >>>>>> >>>>>> On Mon, Jan 12, 2015 at 7:10 PM, nic pederson <[email protected]> >>>>>> wrote: >>>>>> >>>>>>> "source activate" when in ~/climate/easy-ocw/ocw/bin >>>>>>> On Jan 12, 2015 7:05 PM, "Michael Joyce" <[email protected]> wrote: >>>>>>> >>>>>>>> Hey Nic, >>>>>>>> >>>>>>>> What command are you using to start the environment? >>>>>>>> >>>>>>>> >>>>>>>> -- Joyce >>>>>>>> >>>>>>>> On Mon, Jan 12, 2015 at 7:00 PM, [email protected] < >>>>>>>> [email protected]> wrote: >>>>>>>> >>>>>>>>> Hi guys, >>>>>>>>> >>>>>>>>> I was still having trouble, so just did a fresh install of ubuntu. >>>>>>>>> Everything went fine until I tried to activate OCW. I get an error >>>>>>>>> that >>>>>>>>> says "error: no environment provided" >>>>>>>>> >>>>>>>>> Thanks again >>>>>>>>> >>>>>>>>> Nic >>>>>>>>> >>>>>>>>> Sent from my HTC phone. >>>>>>>>> >>>>>>>>> ----- Reply message ----- >>>>>>>>> From: "Michael Joyce" <[email protected]> >>>>>>>>> To: "nic pederson" <[email protected]> >>>>>>>>> Cc: "[email protected]" <[email protected]>, " >>>>>>>>> [email protected]" <[email protected]> >>>>>>>>> Subject: New Student - Caltech-JPL Summer School on Big Data >>>>>>>>> Analytics - Need Help Setting up OCW >>>>>>>>> Date: Mon, Jan 12, 2015 2:32 PM >>>>>>>>> >>>>>>>>> You should be able to run "rm -r /home/nic/Learning/climate/anaconda" >>>>>>>>> (without quotes and make sure I actually got that directory correct ;) >>>>>>>>> >>>>>>>>> Then you should be able to run the Anaconda script the same way >>>>>>>>> the install-ubuntu.sh script does. Namely: >>>>>>>>> bash Anaconda-1.9.2-Linux-x86_64.sh >>>>>>>>> >>>>>>>>> That .sh file should still be in the easy-ocw folder (assuming you >>>>>>>>> ran ./install-ubuntu.sh from /climate/easy-ocw/). When you go through >>>>>>>>> the >>>>>>>>> install just make sure you put the directory where you want it >>>>>>>>> instead of >>>>>>>>> the default. From above I think you'll want: >>>>>>>>> /home/nic/Learning/climate/ >>>>>>>>> >>>>>>>>> If you get stuck let us know! >>>>>>>>> >>>>>>>>> >>>>>>>>> -- Joyce >>>>>>>>> >>>>>>>>> On Mon, Jan 12, 2015 at 2:08 PM, nic pederson < >>>>>>>>> [email protected]> wrote: >>>>>>>>> >>>>>>>>>> Thanks for looking. That's exactly what I did... What as the best >>>>>>>>>> way to wipe/reinstall? Im fairly new to Linux and command line in >>>>>>>>>> general. >>>>>>>>>> >>>>>>>>>> Nic >>>>>>>>>> On Jan 12, 2015 1:51 PM, "Michael Joyce" <[email protected]> >>>>>>>>>> wrote: >>>>>>>>>> >>>>>>>>>>> Ok after looking around a bit and checking your RC my guess is >>>>>>>>>>> that you did something along the lines of: >>>>>>>>>>> >>>>>>>>>>> Ran install-ubuntu.sh >>>>>>>>>>> Decided to move where Anaconda was installed by cp-ing (or >>>>>>>>>>> something) it somewhere else >>>>>>>>>>> ... >>>>>>>>>>> Ended up where we're at >>>>>>>>>>> >>>>>>>>>>> If that is the case then I think your problem is that you can't >>>>>>>>>>> move Anaconda around after the initial install. If you want it in a >>>>>>>>>>> different place you'll need to do that at install-time. Check this >>>>>>>>>>> convo >>>>>>>>>>> [1] for a bit more info. Basically just reinstall Anaconda where >>>>>>>>>>> you want >>>>>>>>>>> it and blow out the old install just to be safe. The install script >>>>>>>>>>> forces >>>>>>>>>>> you to install it in the default location. Patches are more than >>>>>>>>>>> welcome to >>>>>>>>>>> fix this ;) >>>>>>>>>>> >>>>>>>>>>> If that's not what you did then what did you do. Maybe a bit >>>>>>>>>>> more info will get us pointed in the right direction =) >>>>>>>>>>> >>>>>>>>>>> You can also remove the following line from your RC. This looks >>>>>>>>>>> like an input error when running install-ubuntu.sh >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> 1. export >>>>>>>>>>> >>>>>>>>>>> PYTHONPATH=~Learning/climate/easy-owc/install-ubuntu.sh:~Learning/climate/easy-owc/ >>>>>>>>>>> install-ubuntu.sh/ocw >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> [1] >>>>>>>>>>> https://groups.google.com/a/continuum.io/forum/#!msg/anaconda/LcaXE25qElM/VKWYghrjb98J >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> -- Joyce >>>>>>>>>>> >>>>>>>>>>> On Mon, Jan 12, 2015 at 1:23 PM, [email protected] < >>>>>>>>>>> [email protected]> wrote: >>>>>>>>>>> >>>>>>>>>>>> >>>>>>>>>>>> .bashrc >>>>>>>>>>>> pastebin.com/P4Ux1XJm >>>>>>>>>>>> >>>>>>>>>>>> >>>>>>>>>>>> "conda info" >>>>>>>>>>>> >>>>>>>>>>>> bash: /home/nic/Learning/climate/anaconda/bin/conda: >>>>>>>>>>>> /home/nic/anaconda/bin/python: bad interpreter: no such file or >>>>>>>>>>>> directory >>>>>>>>>>>> >>>>>>>>>>>> Sent from my HTC phone. >>>>>>>>>>>> >>>>>>>>>>>> ----- Reply message ----- >>>>>>>>>>>> From: "Michael Joyce" <[email protected]> >>>>>>>>>>>> To: "nic pederson" <[email protected]> >>>>>>>>>>>> Cc: "[email protected]" <[email protected]>, " >>>>>>>>>>>> [email protected]" <[email protected]> >>>>>>>>>>>> Subject: New Student - Caltech-JPL Summer School on Big Data >>>>>>>>>>>> Analytics - Need Help Setting up OCW >>>>>>>>>>>> Date: Mon, Jan 12, 2015 12:58 PM >>>>>>>>>>>> >>>>>>>>>>>> Mkay. Can you please post your entire bashrc (pastebin link >>>>>>>>>>>> would probably be best) and the output of "conda info"? It doesn't >>>>>>>>>>>> seem to >>>>>>>>>>>> be cooperating with regards to where it should look for conda >>>>>>>>>>>> packages. I'm >>>>>>>>>>>> thinking there's some residual config from a previous install or >>>>>>>>>>>> I'm >>>>>>>>>>>> forgetting something really obvious. Worst case we might need to >>>>>>>>>>>> blow out >>>>>>>>>>>> the entire Anaconda install and redo it (FUN!). Hopefully it's just >>>>>>>>>>>> something stupid in a config somewhere we can update. >>>>>>>>>>>> >>>>>>>>>>>> >>>>>>>>>>>> -- Joyce >>>>>>>>>>>> >>>>>>>>>>>> On Mon, Jan 12, 2015 at 12:51 PM, nic pederson < >>>>>>>>>>>> [email protected]> wrote: >>>>>>>>>>>> >>>>>>>>>>>>> /home/nic/Learning/climate/anaconda/bin/conda >>>>>>>>>>>>> On Jan 12, 2015 12:47 PM, "Michael Joyce" <[email protected]> >>>>>>>>>>>>> wrote: >>>>>>>>>>>>> >>>>>>>>>>>>>> Strange. When you run "which conda" what do you see? >>>>>>>>>>>>>> >>>>>>>>>>>>>> >>>>>>>>>>>>>> -- Joyce >>>>>>>>>>>>>> >>>>>>>>>>>>>> On Mon, Jan 12, 2015 at 12:40 PM, nic pederson < >>>>>>>>>>>>>> [email protected]> wrote: >>>>>>>>>>>>>> >>>>>>>>>>>>>>> That did it! Except now I cannot activate OWC. When I >>>>>>>>>>>>>>> activate, I get a line like: >>>>>>>>>>>>>>> >>>>>>>>>>>>>>> bash: (correct path)/climate/anaconda/bin/conda: >>>>>>>>>>>>>>> /home/nic/anaconda/bin/python: bad interpreter: no such file or >>>>>>>>>>>>>>> directory >>>>>>>>>>>>>>> >>>>>>>>>>>>>>> Thanks again for your help. >>>>>>>>>>>>>>> Nic >>>>>>>>>>>>>>> On Jan 12, 2015 12:08 PM, "Michael Joyce" <[email protected]> >>>>>>>>>>>>>>> wrote: >>>>>>>>>>>>>>> >>>>>>>>>>>>>>>> No problem Nic, >>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>> You should have a line in your bashrc similar to the >>>>>>>>>>>>>>>> following. >>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>> export PATH=~/Anaconda/bin:$PATH >>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>> If you replace the assumed path with the location where >>>>>>>>>>>>>>>> Anaconda actually is you should be golden. If that doesn't fix >>>>>>>>>>>>>>>> if for you >>>>>>>>>>>>>>>> though let us know. >>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>> -- Joyce >>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>> On Mon, Jan 12, 2015 at 12:00 PM, nic pederson < >>>>>>>>>>>>>>>> [email protected]> wrote: >>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>> Thanks guys! That sounds about right. The missing module >>>>>>>>>>>>>>>>> is numpy when owc is activated. (It's filenames when it's >>>>>>>>>>>>>>>>> deactivated)... >>>>>>>>>>>>>>>>> Also, I feel like I may have made a bit of a mess of the file >>>>>>>>>>>>>>>>> structure in >>>>>>>>>>>>>>>>> trying to move/reinstall Anaconda a couple times. >>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>> Thanks for all your help. >>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>> Nic >>>>>>>>>>>>>>>>> On Jan 12, 2015 11:23 AM, "Michael Joyce" < >>>>>>>>>>>>>>>>> [email protected]> wrote: >>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>> Hi Nic (and Chris), >>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>> I'm guessing from your question that you are installing >>>>>>>>>>>>>>>>>> onto Ubuntu with the last release of OCW (0.4). You should >>>>>>>>>>>>>>>>>> be fine on >>>>>>>>>>>>>>>>>> 14.10, the old scripts were only tested on 12.04 so we list >>>>>>>>>>>>>>>>>> that >>>>>>>>>>>>>>>>>> explicitly. Of course there is still a possibility that you >>>>>>>>>>>>>>>>>> might run into >>>>>>>>>>>>>>>>>> some problems. If you're pulling off the latest master then >>>>>>>>>>>>>>>>>> the Ubuntu >>>>>>>>>>>>>>>>>> script is tested on 12.04 and 14.04. What modules are >>>>>>>>>>>>>>>>>> failing for you? If >>>>>>>>>>>>>>>>>> it's something like numpy/scipy then you probably have an >>>>>>>>>>>>>>>>>> issue with the >>>>>>>>>>>>>>>>>> location of the Anaconda bin and your path. This could be a >>>>>>>>>>>>>>>>>> result of >>>>>>>>>>>>>>>>>> Anaconda being installed in a different spot than expected >>>>>>>>>>>>>>>>>> or it could be a >>>>>>>>>>>>>>>>>> bug in the install scripts. If you're having problems with >>>>>>>>>>>>>>>>>> some OCW modules >>>>>>>>>>>>>>>>>> not importing then it probably a problem with the PYTHONPATH >>>>>>>>>>>>>>>>>> not being set >>>>>>>>>>>>>>>>>> as expected. Let us know what problems you're seeing and I'm >>>>>>>>>>>>>>>>>> sure we can >>>>>>>>>>>>>>>>>> get it sorted quickly. >>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>> -- Joyce >>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>> On Mon, Jan 12, 2015 at 8:10 AM, Mattmann, Chris A (3980) >>>>>>>>>>>>>>>>>> <[email protected]> wrote: >>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>> Hi Nic, thanks for your question and am forwarding to >>>>>>>>>>>>>>>>>>> the Apache >>>>>>>>>>>>>>>>>>> OCW list for some more help! >>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>> Cheers, >>>>>>>>>>>>>>>>>>> Chris >>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>> ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ >>>>>>>>>>>>>>>>>>> Chris Mattmann, Ph.D. >>>>>>>>>>>>>>>>>>> Chief Architect >>>>>>>>>>>>>>>>>>> Instrument Software and Science Data Systems Section >>>>>>>>>>>>>>>>>>> (398) >>>>>>>>>>>>>>>>>>> NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA >>>>>>>>>>>>>>>>>>> Office: 168-519, Mailstop: 168-527 >>>>>>>>>>>>>>>>>>> Email: [email protected] >>>>>>>>>>>>>>>>>>> WWW: http://sunset.usc.edu/~mattmann/ >>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>> ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ >>>>>>>>>>>>>>>>>>> Adjunct Associate Professor, Computer Science Department >>>>>>>>>>>>>>>>>>> University of Southern California, Los Angeles, CA 90089 >>>>>>>>>>>>>>>>>>> USA >>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>> ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ >>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>> -----Original Message----- >>>>>>>>>>>>>>>>>>> From: Nic <[email protected]> >>>>>>>>>>>>>>>>>>> Date: Monday, January 12, 2015 at 8:08 AM >>>>>>>>>>>>>>>>>>> To: Chris Mattmann <[email protected]> >>>>>>>>>>>>>>>>>>> Subject: New Student - Caltech-JPL Summer School on Big >>>>>>>>>>>>>>>>>>> Data Analytics - >>>>>>>>>>>>>>>>>>> Need Help Setting up OCW >>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>> >Hi Chris! >>>>>>>>>>>>>>>>>>> > >>>>>>>>>>>>>>>>>>> >I'm really excited for this class, but I'm a little >>>>>>>>>>>>>>>>>>> hung up on Day 1 >>>>>>>>>>>>>>>>>>> >installations. Long story short, I've setup PyLint and >>>>>>>>>>>>>>>>>>> OCW, but OCW >>>>>>>>>>>>>>>>>>> >seems to be unable to find some modules. Could this be >>>>>>>>>>>>>>>>>>> because I >>>>>>>>>>>>>>>>>>> >installed files (i suspect anaconda) in the wrong >>>>>>>>>>>>>>>>>>> folders? >>>>>>>>>>>>>>>>>>> > >>>>>>>>>>>>>>>>>>> >I'm running Ubuntu 14.10 (Lenovo IdeaPad). I noticed >>>>>>>>>>>>>>>>>>> that OCW install >>>>>>>>>>>>>>>>>>> >instructions say that I should be running 12.04. I have >>>>>>>>>>>>>>>>>>> 14.10 installed. >>>>>>>>>>>>>>>>>>> >I'm trying to wipe and restart Ubuntu with 12.04 now, >>>>>>>>>>>>>>>>>>> but am having >>>>>>>>>>>>>>>>>>> >trouble getting it to boot. Can I run 14.10 with OCW? >>>>>>>>>>>>>>>>>>> > >>>>>>>>>>>>>>>>>>> >I've checked the discussion boards and have done a bit >>>>>>>>>>>>>>>>>>> of research >>>>>>>>>>>>>>>>>>> >already, but not much fruit. >>>>>>>>>>>>>>>>>>> > >>>>>>>>>>>>>>>>>>> >Thanks so much and I look forward to hearing from you, >>>>>>>>>>>>>>>>>>> >Nic Pederson >>>>>>>>>>>>>>>>>>> > >>>>>>>>>>>>>>>>>>> >541.953.1520 >>>>>>>>>>>>>>>>>>> >@nicpederson >>>>>>>>>>>>>>>>>>> > >>>>>>>>>>>>>>>>>>> > >>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>> >>>>>>>>>>>>>> >>>>>>>>>>>> >>>>>>>>>>> >>>>>>>>> >>>>>>>> >>>>>> >>>> >>> >
