Also, Tim recently just checked in a Main class that essentially could be the beginnings of a Driver program. Check the main() out at: http://svn.apache.org/repos/asf/ctakes/trunk/ctakes-clinical-pipeline/src/main/java/org/apache/ctakes/clinicalpipeline/runtime/BagOfCUIsGenerator.java
--Pei > -----Original Message----- > From: Girivaraprasad Nambari [mailto:[email protected]] > Sent: Wednesday, June 19, 2013 3:47 PM > To: [email protected] > Subject: Re: docs on running Clinical Document Pipeline from Java? > > Hi, > > Welcome to ctakes. > > There was a similar discussion initiated by me few months ago (you may be > able to find out if you browse through old discussions) . Here is response > form Pei Chen & ctakes community: > > It is not quite prime time ready but, take a look peek at the below (It uses > uimaFIT to do the above): > > ** > > http://svn.apache.org/repos/asf/ctakes/sandbox/ctakes- > gui/src/main/java/org/chboston/cnlp/ctakes/gui/service/LauncherService.ja > va > **** > > ** Essentially, it boils down to a few lines of code: > > AnalysisEngine aggregateAE = AnalysisEngineFactory.createAggregate(**** > > engines, componentNames, typeSystemDescription, null,**** > > new SofaMapping[0]);**** > > **** > > JCas jcas = aggregateAE.newJCas();**** > > jcas.setDocumentText(doc.getText());**** > > aggregateAE.process(jcas); > > > We need to start from UIMA and UIMAfit to get some basic understanding, > then using ctakes component will be easy. > > Good luck! > > Thank you, > > Giri > > > On Wed, Jun 19, 2013 at 3:17 PM, Sandy Ryza <[email protected]> > wrote: > > > Hi cTAKES folks, > > > > I am trying to figure out how to run the Clinical Document Pipeline > > from Java. All the documentation I have found so far has been about > > how to do this through a GUI. Is there anything on how to run the > > pipeline programmatically? > > > > thanks for any help! > > Sandy > >
