Samir,
Could you please try to run
ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/pipelines/RelationExtractorPipelineSingleCas.java
and see if it finds any relations in the hard-coded sample sentence. In
that sentence
"He still is not able to work because of severe pain involving his wrists."
you should see the following relations:
degree_of(severe pain/3, severe/2)
degree_of(pain/3, severe/2)
location_of(pain/3, wrists/6)
which will be printed to the console. The numbers next to each argument
are the UMLS semantic types (e.g. 6 = anatomical site).
Dima
On 09/21/2013 11:00 AM, samir chabou wrote:
Hi,
I tried to get examples of relation extractor annotations using
RelationExtractorAggregate.xml. I tried the RelationExtractorAggregate on many
input medical text but there was no annotation for any kind of relation. I even
tried the bellow text used in RelationExtractorAnnotatorsTest but again no
relation is annotated. Do you have idea or am i missing some thing ?
"He had a slight fracture in the proximal right fibula.",
"He had a slight fracture in the proximal right fibula .",
"PRP VBD DT JJ NN IN DT JJ JJ NN .");
Thanks
Samir
--
Dmitriy Dligach, PhD
Research Fellow
Children's Hospital Informatics Program
Boston Children's Hospital and Harvard Medical School
(617) 919-3596
