I believe the only dictionaries shipped with Apache cTAKES in lucene indexes contain just the Orange Book, RxNorm, and some made-up terms, not SNOMED-CT or the other sources taken from UMLS. If that is not correct, then I agree there is a problem with what is being shipped in lucene indexes.
-- James -----Original Message----- From: vijay garla [mailto:vnga...@gmail.com] Sent: Wednesday, July 09, 2014 9:30 AM To: dev@ctakes.apache.org Subject: Re: [VOTE] Release Apache cTAKES 3.2.0 (rc2) ctakes-ytex-lib-3.1.2-SNAPSHOT.zip <https://ytex.googlecode.com/files/ctakes-ytex-lib-3.1.2-SNAPSHOT.zip> - this contains non-asf compliant ytex libs. I would like to add it to the sourceforge site / or add it to the ctakes resources directly (that way users simply have to unzip a single zip file) ctakes-ytex-resources-3.1.2-SNAPSHOT.zip <http://www.ytex-nlp.org/umls.download/secure/3.1/ctakes-ytex-resources-3.1.2-SNAPSHOT.zip> - this contains data derived from the UMLS - concept graphs and dictionary lookup tables. downloading this requires a UTS login. It is conceptually no different from the ctakes resources, so I believe it would be OK to add it to that zip file, but I'm not a lawyer. On another note: I think forcing users to specify the UTS username/password and contacting NIH every time you run cTAKES is problematic, and doesn't prevent users who don't have a valid UTS login from viewing the data contained in the lucene index dictionary. I personally believe requiring a UTS login to download would be the best way to make resources derived from the UMLS available to users (this is what I'm doing for ytex-resources). to summarize: for now, I would like to add the ytex libs to the ctakes resources zip. -vj On Wed, Jul 9, 2014 at 4:04 PM, Chen, Pei <pei.c...@childrens.harvard.edu> wrote: > The maven artifacts are also available in the staging area: > https://repository.apache.org/content/repositories/orgapachectakes-1001 > VJ: Just curious- how did you envision ytex users downloading the > jars/war? From the distro bin.zip or from maven central? > > --Pei > > > -----Original Message----- > > From: Pei Chen [mailto:chen...@apache.org] > > Sent: Tuesday, July 08, 2014 6:11 PM > > To: dev@ctakes.apache.org > > Subject: [VOTE] Release Apache cTAKES 3.2.0 (rc2) > > > > Hi all, > > > > The main difference between rc1 and rc2 is that we removed the lvg-res > and > > assertion-res.jar from the distro. They still need to be unpacked. > > > > This is a call for a vote on releasing the following candidate (rc2) as > Apache > > cTAKES 3.2.0. > > The major changes include: > > - New optional YTEX component(s) (Yale Extensions to cTAKES) > > - New optional improved/faster dictionary lookup (dictionary-lookup-fast) > > - New optional Temporal component (Time + Event extraction. Relations > will > > be including in a future release.) > > - Other bug fixes/enhancements from Jira > > > > [TODO: Online documentation still needs to be updated on wiki] > > > > For more detailed information on the changes/release notes, please visit: > > > https://issues.apache.org/jira/secure/ReleaseNote.jspa?projectId=12313621 > > &version=12324066 > > > > The release was made using the cTAKES release process documented here: > > http://ctakes.apache.org/ctakes-release-guide.html > > > > The candidate is available at: > > http://people.apache.org/~chenpei/RCs/ctakes-3.2.0-rc2/apache-ctakes- > > 3.2.0-src.tar.gz > > /.zip > > > > The tag to be voted on: > > http://svn.apache.org/repos/asf/ctakes/tags/ctakes-3.2.0-rc2 > > > > The MD5 checksum of the tarball can be found at: > > http://people.apache.org/~chenpei/RCs/ctakes-3.2.0-rc2/apache-ctakes- > > 3.2.0-src.tar.gz.md5 > > /.zip.md5 > > > > The signature of the tarball can be found at: > > http://people.apache.org/~chenpei/RCs/ctakes-3.2.0-rc2/apache-ctakes- > > 3.2.0-src.tar.gz.asc > > /.zip.asc > > > > Apache cTAKES' KEYS file, containing the PGP keys used to sign the > release: > > https://dist.apache.org/repos/dist/release/ctakes/KEYS > > > > Please vote on releasing these packages as Apache cTAKES 3.2.0. The vote > is > > open for at least the next 72 hours. > > Only votes from the cTAKES PMC are binding, but folks are welcome to > check > > the release candidate and voice their approval or disapproval. > > The vote passes if at least three binding +1 votes are cast. > > > > [ ] +1 Release the packages as Apache cTAKES 3.2.0 [ ] -1 Do not release > the > > packages because... > > > > Also, the convenience binary can be found at: > > http://people.apache.org/~chenpei/RCs/ctakes-3.2.0-rc2/apache-ctakes- > > 3.2.0-bin.tar.gz > > /.zip > > > > Note: It's temporarily on people.a.o because the artifacts were too > large for > > https://dist.apache.org/repos/dist/dev/ctakes (Working with infra on > > increasing the limit). > > > > > > Thanks! >
