Hi Maite, I just checked the log and it looks like you'll need to use a copy of cTakes built after 12/08/2014 to get Snomed codes.
Sean -----Original Message----- From: Maite Meseure Hugues [mailto:[email protected]] Sent: Monday, February 16, 2015 12:19 PM To: [email protected] Subject: Re: BagOfCuisGenerator.java, same idea for getConceptText() Sean, I have a question, is it because I am using fast dictionary I don't get snomed-oid or snomed-code? Instead, it's " snomed_oid: null#CTAKES". Thank you. Maite On Fri, Feb 13, 2015 at 1:32 PM, Maite Meseure Hugues < [email protected]> wrote: > Thank you for your replies, It's helpful. I was working on 3.2.0 > version, so it looks like 3.2.1 allows to get the UMLS preferred text. > > Maite > > On Thu, Feb 12, 2015 at 2:25 PM, Finan, Sean < > [email protected]> wrote: > >> Oh yeah - use the -fast dictionary to get preferred text. The >> fastest way to get cuis only is with CuisOnlyPlaintextUMLSProcessor. >> If you want polarity make sure you uncomment the section with >> PolarityCleartkAnalysisEngine. >> >> Sean >> >> -----Original Message----- >> From: Maite Meseure Hugues [mailto:[email protected]] >> Sent: Thursday, February 12, 2015 2:46 PM >> To: [email protected] >> Subject: BagOfCuisGenerator.java, same idea for getConceptText() >> >> Hi everyone, >> >> I am currently working on BagOfCuisGenerator, and I would like to add >> the concept text to the output. >> I 've seen some discussions about getting the original text and UMLS >> preferred text in addition to the cui. Can someone give me pointers >> to do that? >> Thanks in advance for your time. >> >> Maite >> >> -- >> -- >> Maïté Meseure Hugues >> > > > > -- > -- > Maïté Meseure Hugues > > -- -- Maïté Meseure Hugues
