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https://issues.apache.org/jira/browse/JENA-1138?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15141207#comment-15141207
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Andy Seaborne commented on JENA-1138:
-------------------------------------

This may be already fixed recently in DatasetUtils.addInGraphs which is now 
transaction sensitive.

> java.lang.OutOfMemoryError: GC overhead limit exceeded
> ------------------------------------------------------
>
>                 Key: JENA-1138
>                 URL: https://issues.apache.org/jira/browse/JENA-1138
>             Project: Apache Jena
>          Issue Type: Bug
>          Components: Cmd line tools
>    Affects Versions: Jena 3.0.1
>         Environment: Oracle JDK 1.8.0, Windows 7 64bit
>            Reporter: Giovanni Mels
>              Labels: performance
>         Attachments: sample-data.zip
>
>
> Since 3.0.1 we get {{java.lang.OutOfMemoryError: GC overhead limit exceeded}} 
> exceptions when using the {{sparql}} command line tool, even on relative 
> small datasets (~1.6 million triples).
> The issue occurs when the dataset is loaded in memory, so before the actual 
> query execution. 
> {code}
> sparql --query empty.rq --data sample-data.ttl
> {code}
> Where {{empty.rq}} contains:
> {noformat}
> SELECT * WHERE {}
> {noformat}
> This query takes ~20 seconds using Jena 2.13.0 and Jena 3.0.0, it fails with 
> 3.0.1 after ~4 minutes with {{java.lang.OutOfMemoryError: GC overhead limit 
> exceeded}}



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