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https://issues.apache.org/jira/browse/JOSHUA-304?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15434955#comment-15434955
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Matt Post commented on JOSHUA-304:
----------------------------------
There shouldn't be any problems with the config files; I think the issue is
probably that $JOSHUA/lib/berkeleyaligner.jar no longer exists.
I just pushed up a change that build the berkeleyaligner jar. I can't get the
jar to actually build at the moment, though. This will take some work. Then
we'll need to update the aligner script to point to where the jar gets built
(probably ext/berkeleyaligner/berkeleyaligner.jar).
> word-align.conf alignment template file not compatible with berkeley aligner
> ----------------------------------------------------------------------------
>
> Key: JOSHUA-304
> URL: https://issues.apache.org/jira/browse/JOSHUA-304
> Project: Joshua
> Issue Type: Bug
> Components: alignment, berkeley, templates
> Affects Versions: 6.0.5
> Reporter: Lewis John McGibbney
> Priority: Blocker
> Fix For: 6.1
>
>
> It takes me quite some time to debug what was going on and why pipeline's
> were failing when using the berkeley aligner.
> It turns out that the word-align.conf template provided at
> https://github.com/apache/incubator-joshua/blob/master/scripts/training/templates/alignment/word-align.conf
> is not compatible with the berkeley aligner.
> In particular the following lines are non compatible
> https://github.com/apache/incubator-joshua/blob/master/scripts/training/templates/alignment/word-align.conf#L12-L15
> Evidence of this is provided below
> {code}
> lmcgibbn@LMC-032857 /usr/local/incubator-joshua/lib(master) $ java -d64
> -Xmx10g -jar /usr/local/incubator-joshua/lib/berkeleyaligner.jar
> ++/usr/local/incubator-joshua/experiments/fisher_callhome_experiment/6/alignments/0/word-align.conf
> Invalid enum: 'MODEL1 HMM'; valid choices: MODEL1|MODEL2|HMM|SYNTACTIC|NONE
> lmcgibbn@LMC-032857 /usr/local/incubator-joshua/lib(master) $ java -d64
> -Xmx10g -jar /usr/local/incubator-joshua/lib/berkeleyaligner.jar
> ++/usr/local/incubator-joshua/experiments/fisher_callhome_experiment/6/alignments/0/word-align.conf
> Invalid enum: 'MODEL1, HMM'; valid choices: MODEL1|MODEL2|HMM|SYNTACTIC|NONE
> lmcgibbn@LMC-032857 /usr/local/incubator-joshua/lib(master) $ java -d64
> -Xmx10g -jar /usr/local/incubator-joshua/lib/berkeleyaligner.jar
> ++/usr/local/incubator-joshua/experiments/fisher_callhome_experiment/6/alignments/0/word-align.conf
> Invalid enum: 'MODEL1 HMM'; valid choices: MODEL1|MODEL2|HMM|SYNTACTIC|NONE
> lmcgibbn@LMC-032857 /usr/local/incubator-joshua/lib(master) $ java -d64
> -Xmx10g -jar /usr/local/incubator-joshua/lib/berkeleyaligner.jar
> ++/usr/local/incubator-joshua/experiments/fisher_callhome_experiment/6/alignments/0/word-align.conf
> Invalid enum: 'JOINT JOINT'; valid choices: FORWARD|REVERSE|BOTH_INDEP|JOINT
> lmcgibbn@LMC-032857 /usr/local/incubator-joshua/lib(master) $ java -d64
> -Xmx10g -jar /usr/local/incubator-joshua/lib/berkeleyaligner.jar
> ++/usr/local/incubator-joshua/experiments/fisher_callhome_experiment/6/alignments/0/word-align.conf
> Exception in thread "main" java.lang.NumberFormatException: For input string:
> "5 5"
> at
> java.lang.NumberFormatException.forInputString(NumberFormatException.java:65)
> at java.lang.Integer.parseInt(Integer.java:580)
> at java.lang.Integer.parseInt(Integer.java:615)
> at
> edu.berkeley.nlp.fig.basic.OptInfo.interpretValue(OptionsParser.java:143)
> at
> edu.berkeley.nlp.fig.basic.OptInfo.interpretValue(OptionsParser.java:240)
> at edu.berkeley.nlp.fig.basic.OptInfo.set(OptionsParser.java:294)
> at
> edu.berkeley.nlp.fig.basic.OptionsParser.readOptionsFile(OptionsParser.java:555)
> at
> edu.berkeley.nlp.fig.basic.OptionsParser.doParse(OptionsParser.java:604)
> at edu.berkeley.nlp.fig.exec.Execution.init(Execution.java:293)
> at edu.berkeley.nlp.wordAlignment.Main.main(Main.java:149)
> lmcgibbn@LMC-032857 /usr/local/incubator-joshua/lib(master) $ java -d64
> -Xmx10g -jar /usr/local/incubator-joshua/lib/berkeleyaligner.jar
> ++/usr/local/incubator-joshua/experiments/fisher_callhome_experiment/6/alignments/0/word-align.conf
> Cannot create directory: alignments/0
> {code}
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