Hello Lise,
dgeqpf & zgeqpf seem are deprecated
<http://www.netlib.org/lapack/lapack-3.6.0.html> in Lapack 3.6+, that
may be the issue here, could you please try with a less recent version
<http://www.netlib.org/lapack/>? 3.5.0 should do.
Let us know hos it goes,
Regards,
Paul
On 02/10/2017 04:37 PM, Lebouc Lise (CS SI) wrote:
Hi,
I want to install Scilab 5.5.2 from source on Cent OS 7 with the
minimal option and I obtain an error during the compilation step of
Scilab.
My option for configure are :
configure --prefix=/install_directory
--without-gui
--without-javasci
--without-jdk
--disable-build-help
--disable-build-localization
--without-xcos
--without-modelica
--without-fftw
--without-umfpack
--without-matio
--without-tk
--without-openmp
--without-arpack-ng
--with-lapack-library=/install_directory/lapack/3.6.1/lib
--with-blas-library=/install_directory/lapack/3.6.1/lib
I used lapack 3.6.1. Configure worked well but I got this message
during the compilation :
g++ -DHAVE_CONFIG_H -I. -I./modules/core/includes
-I./modules/io/includes/ -I./modules/console/includes/
-I./modules/localization/includes/ -DNDEBUG -fno-stack-protector -g
-O2 -MT modules/startup/src/c/scilab_bin-mainscic.o -MD -MP -MF
modules/startup/src/c/.deps/scilab_bin-mainscic.Tpo -c -o
modules/startup/src/c/scilab_bin-mainscic.o `test -f
'modules/startup/src/c/mainscic.cpp' || echo
'./'`modules/startup/src/c/mainscic.cpp
mv -f modules/startup/src/c/.deps/scilab_bin-mainscic.Tpo
modules/startup/src/c/.deps/scilab_bin-mainscic.Po
/bin/sh ./libtool --tag=CXX --mode=link g++ -DNDEBUG
-fno-stack-protector -g -O2 -static-libstdc++ -static-libgcc
-Wl,--no-as-needed -o scilab-bin
modules/startup/src/c/scilab_bin-mainscic.o ./modules/libscilab.la
./modules/libscilab-cli.la -lxml2 -lz -lm -ldl
-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5
-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64
-L/lib/../lib64 -L/usr/lib/../lib64
-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lpthread -ldl
-lcurses -lgfortran -lm -lquadmath
./modules/console/libsciconsole-minimal.la
./modules/jvm/libscijvm-disable.la -lpthread -ldl -lcurses -lm
libtool: link: g++ -DNDEBUG -fno-stack-protector -g -O2
-static-libstdc++ -static-libgcc -Wl,--no-as-needed -o
.libs/scilab-bin modules/startup/src/c/scilab_bin-mainscic.o
./modules/.libs/libscilab.so -L/work/logiciels/rh7/lapack/3.6.1/lib
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/.libs/libscilab-cli.so
./modules/.libs/libscilab-cli.so -lcurl
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/functions/.libs/libscifunctions.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/call_scilab/.libs/libscicall_scilab.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/localization/.libs/libscilocalization.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/special_functions/.libs/libscispecial_functions.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/completion/.libs/libscicompletion.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/history_manager/.libs/libscihistory_manager.so
-lpcreposix -lpcre
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/hdf5/.libs/libscihdf5.so
-lhdf5 -lhdf5_hl
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/statistics/.libs/libscistatistics.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/xml/.libs/libscixml.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/external_objects/.libs/libsciexternal_objects.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/preferences/.libs/libscipreferences-cli.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/gui/.libs/libscigui-disable.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/graphics/.libs/libscigraphics-disable.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/graphic_export/.libs/libscigraphic_export-disable.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/console/.libs/libsciconsole-minimal.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/action_binding/.libs/libsciaction_binding-disable.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/jvm/.libs/libscijvm-disable.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/xcos/.libs/libscixcos-disable.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/graphic_objects/.libs/libscigraphic_objects-disable.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/scinotes/.libs/libsciscinotes-disable.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/ui_data/.libs/libsciui_data-disable.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/history_browser/.libs/libscihistory_browser-disable.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/commons/.libs/libscicommons-disable.so
-llapack -lblas -lxml2 -lz -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5
-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64
-L/lib/../lib64 -L/usr/lib/../lib64
-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran
-lquadmath ./modules/console/.libs/libsciconsole-minimal.so
./modules/jvm/.libs/libscijvm-disable.so -lpthread -ldl -lcurses -lm
-Wl,-rpath -Wl,/work/ADM/hpc/leboucl/INSTALL/rh7/scilab/5.5.2/lib/scilab
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/.libs/libscilab-cli.so:
undefined reference to `dgeqpf_'
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/.libs/libscilab-cli.so:
undefined reference to `zgeqpf_'
collect2: error: ld returned 1 exit status
make[1]: *** [scilab-bin] Error 1
make[1]: Leaving directory
`/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2'
make: *** [all-recursive] Error 1
Do you have any idea about what is missing to find the symbol dgeqpf_
and zgeqpf_ ? In which library should I find them?
Thanks,
Lise
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Paul BIGNIER
Development engineer
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