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https://issues.apache.org/jira/browse/LUCENE-2729?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=12935680#action_12935680
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Jan te Beest commented on LUCENE-2729:
--------------------------------------

OK, thanks for the info.

> Index corruption after 'read past EOF' under heavy update load and snapshot 
> export
> ----------------------------------------------------------------------------------
>
>                 Key: LUCENE-2729
>                 URL: https://issues.apache.org/jira/browse/LUCENE-2729
>             Project: Lucene - Java
>          Issue Type: Bug
>          Components: Index
>    Affects Versions: 3.0.1, 3.0.2
>         Environment: Happens on both OS X 10.6 and Windows 2008 Server. 
> Integrated with zoie (using a zoie snapshot from 2010-08-06: 
> zoie-2.0.0-snapshot-20100806.jar).
>            Reporter: Nico Krijnen
>         Attachments: 2010-11-02 IndexWriter infoStream log.zip, 
> backup_force_failure2.log.zip, eof-extra-logging-4-analysis.txt, 
> eof-extra-logging-4.log.zip, LUCENE-2729-test1.patch, 
> read-past-eof-debugging.zip
>
>
> We have a system running lucene and zoie. We use lucene as a content store 
> for a CMS/DAM system. We use the hot-backup feature of zoie to make scheduled 
> backups of the index. This works fine for small indexes and when there are 
> not a lot of changes to the index when the backup is made.
> On large indexes (about 5 GB to 19 GB), when a backup is made while the index 
> is being changed a lot (lots of document additions and/or deletions), we 
> almost always get a 'read past EOF' at some point, followed by lots of 'Lock 
> obtain timed out'.
> At that point we get lots of 0 kb files in the index, data gets lots, and the 
> index is unusable.
> When we stop our server, remove the 0kb files and restart our server, the 
> index is operational again, but data has been lost.
> I'm not sure if this is a zoie or a lucene issue, so i'm posting it to both. 
> Hopefully someone has some ideas where to look to fix this.
> Some more details...
> Stack trace of the read past EOF and following Lock obtain timed out:
> {code}
> 78307 [proj.zoie.impl.indexing.internal.realtimeindexdataloa...@31ca5085] 
>     ERROR proj.zoie.impl.indexing.internal.BaseSearchIndex - read past EOF
> java.io.IOException: read past EOF
>     at 
> org.apache.lucene.store.BufferedIndexInput.refill(BufferedIndexInput.java:154)
>     at 
> org.apache.lucene.store.BufferedIndexInput.readByte(BufferedIndexInput.java:39)
>     at 
> org.apache.lucene.store.ChecksumIndexInput.readByte(ChecksumIndexInput.java:37)
>     at org.apache.lucene.store.IndexInput.readInt(IndexInput.java:69)
>     at org.apache.lucene.index.SegmentInfos.read(SegmentInfos.java:245)
>     at 
> org.apache.lucene.index.IndexFileDeleter.<init>(IndexFileDeleter.java:166)
>     at 
> org.apache.lucene.index.DirectoryReader.doCommit(DirectoryReader.java:725)
>     at org.apache.lucene.index.IndexReader.commit(IndexReader.java:987)
>     at org.apache.lucene.index.IndexReader.commit(IndexReader.java:973)
>     at org.apache.lucene.index.IndexReader.decRef(IndexReader.java:162)
>     at org.apache.lucene.index.IndexReader.close(IndexReader.java:1003)
>     at 
> proj.zoie.impl.indexing.internal.BaseSearchIndex.deleteDocs(BaseSearchIndex.java:203)
>     at 
> proj.zoie.impl.indexing.internal.BaseSearchIndex.loadFromIndex(BaseSearchIndex.java:223)
>     at 
> proj.zoie.impl.indexing.internal.LuceneIndexDataLoader.loadFromIndex(LuceneIndexDataLoader.java:153)
>     at 
> proj.zoie.impl.indexing.internal.DiskLuceneIndexDataLoader.loadFromIndex(DiskLuceneIndexDataLoader.java:134)
>     at 
> proj.zoie.impl.indexing.internal.RealtimeIndexDataLoader.processBatch(RealtimeIndexDataLoader.java:171)
>     at 
> proj.zoie.impl.indexing.internal.BatchedIndexDataLoader$LoaderThread.run(BatchedIndexDataLoader.java:373)
> 579336 [proj.zoie.impl.indexing.internal.realtimeindexdataloa...@31ca5085] 
>     ERROR proj.zoie.impl.indexing.internal.LuceneIndexDataLoader - 
>     Problem copying segments: Lock obtain timed out: 
>     org.apache.lucene.store.singleinstancel...@5ad0b895: write.lock
> org.apache.lucene.store.LockObtainFailedException: Lock obtain timed out: 
>     org.apache.lucene.store.singleinstancel...@5ad0b895: write.lock
>     at org.apache.lucene.store.Lock.obtain(Lock.java:84)
>     at org.apache.lucene.index.IndexWriter.init(IndexWriter.java:1060)
>     at org.apache.lucene.index.IndexWriter.<init>(IndexWriter.java:957)
>     at 
> proj.zoie.impl.indexing.internal.DiskSearchIndex.openIndexWriter(DiskSearchIndex.java:176)
>     at 
> proj.zoie.impl.indexing.internal.BaseSearchIndex.loadFromIndex(BaseSearchIndex.java:228)
>     at 
> proj.zoie.impl.indexing.internal.LuceneIndexDataLoader.loadFromIndex(LuceneIndexDataLoader.java:153)
>     at 
> proj.zoie.impl.indexing.internal.DiskLuceneIndexDataLoader.loadFromIndex(DiskLuceneIndexDataLoader.java:134)
>     at 
> proj.zoie.impl.indexing.internal.RealtimeIndexDataLoader.processBatch(RealtimeIndexDataLoader.java:171)
>     at 
> proj.zoie.impl.indexing.internal.BatchedIndexDataLoader$LoaderThread.run(BatchedIndexDataLoader.java:373)
> {code}
> We get exactly the same behavour on both OS X and on Windows. On both zoie is 
> using a SimpleFSDirectory.
> We also use a SingleInstanceLockFactory (since our process is the only one 
> working with the index), but we get the same behaviour with a NativeFSLock.
> The snapshot backup is being made by calling:
> *proj.zoie.impl.indexing.ZoieSystem.exportSnapshot(WritableByteChannel)*
> Same issue in zoie JIRA:
> http://snaprojects.jira.com/browse/ZOIE-51

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