Great, Dave, I agree!

Cheers,
Chris

On Oct 28, 2011, at 11:23 AM, David Kale wrote:

> Thien,
> 
> Actually, a great place to start would be the attached paper, "An
> Informatics Architecture for the Virtual Pediatric Intensive Care
> Unit" from CBMS 2011, describing an effort to do data management at
> Children's Hospital LA in a way that can scale to multiple
> institutions, using OODT principles and components.  There are a
> number of VPICU team members on this list (from both CHLA and JPL) who
> would be happy to answer your questions, on the list or offline.
> 
> My perspective is the following: data integration and management in
> large medical institutions and organizations is HARD.  That is a
> simple fact, and any company or organization who claims to have an
> out-of-the-box solution is either deluded or lying.  There is some
> amount of DYI (do it yourself) that is unavoidable, and so -- in my
> opinion -- it's best to go with something that gives you a lot of
> interoperable but loosely coupled tools, components, and modules that
> save you bits of work here and there but are also easily modified or
> extended.  From that standpoint, OODT and the larger Apache ecosystem
> are quite suitable.
> 
> As for specifics, I'd recommend diving into the FileManager and
> WorkFlowManager components, though perhaps others would offer
> different advice.
> 
> Anyway, sounds like you're clearly heading in the same direction we
> are, so we'd be happy to chat more!
> 
> Dave
> 
> 
> 
> On Fri, Oct 28, 2011 at 9:27 AM, Nguyen, Thien <[email protected]> wrote:
>> Hello,
>> 
>> I'm a medical informatics software developer at the Boston Department of 
>> Veteran Affairs. We are reviewing tools to prototype for use in our systems 
>> that would help manage, share, and track research information. We have 
>> genomic data, health records, phenotypic data, and results of nlp/machine 
>> learning techniques.
>> 
>> OODT sounds like a nice package that we would like to try out, but, 
>> honestly, the website says very little. I'm not even sure where to begin to 
>> even try interacting with the downloaded source. Any direction on how to get 
>> started or lower-level resources to read up on would be greatly appreciated.
>> 
>> Thanks,
>> Thien
>> 


++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Chris Mattmann, Ph.D.
Senior Computer Scientist
NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
Office: 171-266B, Mailstop: 171-246
Email: [email protected]
WWW:   http://sunset.usc.edu/~mattmann/
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Adjunct Assistant Professor, Computer Science Department
University of Southern California, Los Angeles, CA 90089 USA
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