You shouldn't have to make any changes... I've attache a screen shot of
what you should see.

If you don't see "Rya Accumulo Store" try these steps:

Restart Tomcat
-- 1. Log into the vm (run: "ssh vagrant@rya-example-box" with pass:
vagrant)
-- 2. switch to root (run: "su" with pass: vagrant)
-- 3. restart tomcat (run: "service tomcat7 restart")
-- 4. open the "new repository" page again and see if rya was added (new
repo page:
http://rya-example-box:8080/openrdf-workbench/repositories/NONE/create)

If that doesn't work, make sure that the openrdf-workbench transforms are
correct:
The transforms are in this directory:
/var/lib/tomcat7/webapps/openrdf-workbench/transformations/

-- 1. Verify that this file exists: create-RyaAccumuloSail.xsl
--- 2. Verify that create.xsl has been updated for rya.  (run: "cat
create.xsl | grep Rya" and make sure there's some stuff there.)

Thanks for testing this out.  Let me know if this resolves your issues.

--Aaron




On Tue, Jan 12, 2016 at 1:04 PM Fan Yang <[email protected]> wrote:

> Hi Aaron,
>
> Thank you so much for your help! I followed the instructions and created
> the VM. Everything works fine except one thing I am not very clear: in
> “connecting to Rya via OpenRDF Workbench” step, I cannot find “Rya Accumulo
> Store” in “Type” option. I am wondering if I should make some
> configurations in Rya and Accumulo.
>
> Bests,
>
> Fan
>
> On Jan 1, 2016, at 10:54 PM, Aaron D. Mihalik <[email protected]>
> wrote:
>
> Fan,
>
> I'm sorry about the delay, but I finally got the Rya/Vagrant/OpenRDF
> Workbench VM into a good spot.  Can you test out the instructions at:
>
>
> https://github.com/amihalik/incubator-rya/blob/RYA-4/extras/vagrantExample/src/main/vagrant/readme.md
>
> Once you run this VM, it should be straightforward to upload and query
> your data through OpenRDF Workbench.
>
> For instance, once you connect Rya and OpenRDF Workbench, you can open the
> Workbench, click on "Add", and cut-and-paste your ntriples into the "RDF
> Content" field.
>
> Then you can click on "Query" and run this SPARQL query:
>
> select * where { <http://mynamespace/ProductType1> ?p ?o. }
>
> --Aaron
>
> On Thu, Dec 17, 2015 at 1:00 PM Fan Yang <[email protected]> wrote:
>
>> Hi Dr. Adina,
>>
>> I named my $RDF_DATA file as ntriplesFile and put it under the folder
>> same as Java code’s. I tried to delete the empty loadrdf file and re-run
>> the code, the same error message was showed up. The error log containing
>> the command I’m using, loadrdf java code and ntripleFile are attached in
>> this email. Thanks!
>>
>> Bests,
>>
>> Fan
>>
>>
>>
>> On Dec 16, 2015, at 2:55 PM, Fan Yang <[email protected]> wrote:
>>
>> Hi Dr. Adina,
>>
>> The one I’m using is an empty file. Cause when the war package is
>> deployed, there is no such file named loadrdf under the certain folder. The
>> n-Triples file I’m using is the one listed on the tutorial, the content is :
>>
>> <http://mynamespace/ProductType1> 
>> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> 
>> <http://mynamespace/ProductType> .
>> <http://mynamespace/ProductType1> 
>> <http://www.w3.org/2000/01/rdf-schema#label> "Thing" .
>> <http://mynamespace/ProductType1> 
>> <http://purl.org/dc/elements/1.1/publisher> <http://mynamespace/Publisher1> .
>>
>> Bests,
>>
>> Fan
>>
>> On Dec 16, 2015, at 2:23 PM, Adina Crainiceanu <[email protected]> wrote:
>>
>> Fan,
>>
>> Can you please send the rdf file you are trying to load? Maybe that is
>> the problem.
>>
>> Adina
>>
>> On Thu, Dec 3, 2015 at 12:44 PM, Fan Yang <[email protected]> wrote:
>>
>>> Hi Aaron,
>>>
>>> There is an additional information you may need: Once I checked the
>>> web.rya folder under the webapps directory, there is no such file named
>>> loadrdf or queryrdf, so I created empty ones. Maybe that causes the error.
>>> Could you check your webapps directory to see if those files contain some
>>> certain scripts? Thank you so much!
>>>
>>> Bests,
>>>
>>> Fan
>>> > On Dec 3, 2015, at 3:15 AM, Fan Yang <[email protected]> wrote:
>>> >
>>> > Hi Aaron,
>>> >
>>> > Thank you so much for your help! I reproduced the Vagrant VM
>>> successfully by following your instruction. Everything is working except
>>> loading data part. Even I fixed the “/“ error in the code I still face the
>>> same HTTP 500 error. I capture the error message when I load the link [4]
>>> http://localhost:8080/web.rya/loadrdf?format=N-Triples <
>>> http://localhost:8080/web.rya/loadrdf?format=N-Triples> on my browser
>>> and copy the tomcat log file to you.
>>> >
>>> > Bests,
>>> >
>>> > Fan
>>> >
>>> > <catalina.2015-12-03.log>
>>> > <error log>
>>> >
>>> >> On Dec 2, 2015, at 4:34 AM, Aaron D. Mihalik <[email protected]
>>> <mailto:[email protected]>> wrote:
>>> >>
>>> >> Hi Fan,
>>> >>
>>> >> The tutorial is a bit dated, so it might be confusing/incorrect.
>>> >>
>>> >> You have a couple options:
>>> >>
>>> >> 1. You could start using the Vagrant vm that I'm putting together as
>>> a "Rya Quickstart VM".
>>> >>
>>> >> It's a bit rough right now, and it doesn't have Hadoop or MapReduce
>>> (so you can't do the bulk load), but it does have the script you mentioned
>>> for loading N-Triples.  An early copy of the Vagrantfile is here [1].
>>> >>
>>> >> It'll take about 30 minutes to build the VM, but once you do, you'll
>>> have the rya web endpoint up and running here [2] and you can ssh into the
>>> box to load data.  Once you ssh into the machine, you can run 'java
>>> LoadDataServletRun' to load n-triples files.  Infact, you that script will
>>> take a "batchSize" parameter to split a large ntriples into small loads.
>>> >>
>>> >> 2. We can help you debug your current vm.
>>> >>
>>> >> The first step would be to try to hit this webpage [3] and see if the
>>> sparql query page loads.  Also note that the URL you provided has an extra
>>> "/" in it and you should try [4].
>>> >>
>>> >> If those load properly, then the issue might be the
>>> LoadDataServletRun file itself (I haven't tried the one you mentioned), but
>>> you could try the new one located at the bottom of the Vagrant file.
>>> >>
>>> >> If those links do not load properly, please send us your tomcat logs
>>> and we'll take a look to see what's up with tomcat.
>>> >>
>>> >> --Aaron
>>> >>
>>> >> [1]
>>> https://raw.githubusercontent.com/amihalik/incubator-rya/RYA-4/extras/indexingSailExample/src/main/vagrant/Vagrantfile
>>> <
>>> https://raw.githubusercontent.com/amihalik/incubator-rya/RYA-4/extras/indexingSailExample/src/main/vagrant/Vagrantfile
>>> >
>>> >> [2] http://192.168.33.10:8080/web.rya/sparqlQuery.jsp <
>>> http://192.168.33.10:8080/web.rya/sparqlQuery.jsp> or
>>> http://accumulo-dev-box:8080/web.rya/sparqlQuery.jsp <
>>> http://accumulo-dev-box:8080/web.rya/sparqlQuery.jsp>
>>> >> [3] http://localhost:8080/web.rya/sparqlQuery.jsp <
>>> http://localhost:8080/web.rya/sparqlQuery.jsp>
>>> >> [4] http://localhost:8080/web.rya/loadrdf?format=N-Triples <
>>> http://localhost:8080/web.rya/loadrdf?format=N-Triples>
>>> >> On Wed, Dec 2, 2015 at 2:25 AM Fan Yang <[email protected] <mailto:
>>> [email protected]>> wrote:
>>> >> Hi Aaron,
>>> >>
>>> >> Sorry to bother you again. I faced a new problem in loading RDF data
>>> process. Following the tutorial, I created loadrdf folder and N-Triples
>>> file $RDF_DATA, when I complied and run the java code, it gave the error
>>> message like :”java.io.IOException: Server returned HTTP response code: 500
>>> for URL: http://localhost:8080/web.rya/loadrdf/?format=N-Triples <
>>> http://localhost:8080/web.rya/loadrdf/?format=N-Triples>” my tomcat
>>> host server’s URL is localhost and port number is 8080 by default.
>>> >>
>>> >> Also another question is about bulk load RDF data. There is an
>>> example code in the tutorial, I’ve tried to find the similar jar package
>>> named accumulo.rya-3.0.4-SNAPSHOT-shaded.jar, unfortunately the only one I
>>> could found is accumulo.rya-3.2.10-SNAPSHOT.jar and when I replaced the
>>> code with this one, it said it’s not a valid jar.
>>> >>
>>> >> Please let me know if I misunderstood and did anything wrong with the
>>> tutorial, thank you very much!
>>> >>
>>> >> Bests,
>>> >>
>>> >> Fan
>>> >>
>>> >>
>>> >>> On Nov 19, 2015, at 1:24 PM, Aaron D. Mihalik <[email protected]
>>> <mailto:[email protected]>> wrote:
>>> >>>
>>> >>
>>> >>> Hey Fan.  Are you on the dev list?  I didn't do a "reply-all"...
>>> >>>
>>> >>> My response to your email this morning is below.
>>> >>>
>>> >>> ---------- Forwarded message ---------
>>> >>> From: Aaron D. Mihalik <[email protected] <mailto:
>>> [email protected]>>
>>> >>> Date: Thu, Nov 19, 2015 at 8:47 AM
>>> >>> Subject: Re: Maven Build Error
>>> >>> To: <[email protected] <mailto:
>>> [email protected]>>
>>> >>>
>>> >>>
>>> >>> Hey Fan!
>>> >>>
>>> >>> Thanks for downloading Rya and testing it out.
>>> >>>
>>> >>> It appears that you must use Maven 3 (for kinda a funny reason...
>>> it'll hit the apache repo by default), and it appears that there are some
>>> test issues with mvm.rya.accumulo.AccumuloRyaDAOTest.
>>> >>>
>>> >>> You should be able to build rya using this command (with maven 3):
>>> mvn clean install -DskipTests
>>> >>>
>>> >>> Regardless, we need to create an ticket to fix your broken test.
>>> Could you send out your test report?  Specifically, we're interested in :
>>> dao/accumulo.rya/target/surefire-reports/mvm.rya.accumulo.AccumuloRyaDAOTest.txt
>>> >>>
>>> >>> --Aaron
>>> >>>
>>> >>>
>>> >>> On Thu, Nov 19, 2015 at 7:28 AM Fan Yang <[email protected] <mailto:
>>> [email protected]>> wrote:
>>> >>> Hi,
>>> >>>
>>> >>> My name is Fan Yang, I am a phd student in Information Systems
>>> Department, UMBC. Currently I am working on Rya project under the
>>> supervision of Dr. Adina. I faced a problem when I tried to reproduce the
>>> development environment on my virtual machine.
>>> >>>
>>> >>> When I built Rya project by Maven, it gave me some error report and
>>> same thing happened even I tried different versions of Maven. I am
>>> attaching the log files generated by Maven 3.3.3 (log333.txt) and Maven
>>> 2.2.1 (log221.txt) and looking for some help. Thank you so much!
>>> >>>
>>> >>> My development environment is:
>>> >>>
>>> >>> OS: Hortonworks Sandbox with HDP 2.2.4 (Cent OS 6 64bit)
>>> >>> Maven version: 3.3.3
>>> >>> Java version: OpenJDK Runtime Environment 1.7.0_79
>>> >>> Accumulo version: 1.6.1.2.2.4.2-2
>>> >>> Hadoop version:2.6.0.2.2.4.2-2
>>> >>>
>>> >>> Bests,
>>> >>>
>>> >>> Fan
>>> >>>
>>> >
>>>
>>>
>>
>>
>> --
>> Dr. Adina Crainiceanu
>> http://www.usna.edu/Users/cs/adina/
>>
>>
>>
>>
>

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