+1 (binding)

Sent from my iPhone

> On Jul 18, 2019, at 5:06 PM, Jeff Dasch <[email protected]> wrote:
> 
> +1 (non-binding)
> Verified checksums match for source release.  I found a couple issues with
> flaky integration tests, but they can probably just be logged in JIRA.
> 
> I had no issues when I used docker to verify the build with this command:
> docker run -it --rm
>  -v /path/to/blank-m2-cache:/root/.m2 \
>  -v "$(pwd)":/usr/src/rya \
>  -w /usr/src/rya \
>  maven:3.6.1-jdk-8 \
>  mvn clean install -P geoindexing,benchmark,giraph
> 
> I did run into some issues when I tried running a complete build with all
> profiles enabled:
> mvn clean install -P geoindexing,benchmark,giraph,enable-it
> 
> I had to -rf from rya.pcj.fluo.integration, rya.streams.client, and
> rya.streams.integration as there were some timeout issues that caused the
> builds to fail.  I suppose it could be docker related, or some IT
> dependencies aren't getting cleaned up properly during teardown.
> Ultimately, I was not able to get rya.streams.client to build with all of
> those profiles in docker.
> 
> I also ran it against an internal build server and it logged 3 IT failures:
> org.apache.rya.streams.client.command.AddQueryCommandIT.longParams
> org.apache.rya.streams.client.command.RunQueryCommandIT.runQueryFromFile
> org.apache.rya.streams.client.command.RunQueryCommandIT.runQuery
> 
> I exercised those IT's individually and found that RunQueryCommandIT seemed
> to hang forever, but AddQueryComandIT passed.  RunQueryCommandIT has some
> threading and joins, so we might want to put an additional timeout in so it
> fails faster instead of failing with the maven-failsafe-plugin's timeout.
> 
> Finally, the kafka and zookeeper loggers are configured to log at the debug
> level during the build which dumps out a lot of unnecessary logging
> statements.  We might want to turn that off or down as it will help
> speed-up builds.
> 
> 
> 
> On Thu, Jul 18, 2019 at 11:04 AM Aaron D. Mihalik <[email protected]>
> wrote:
> 
>> All,
>> 
>> The vote will close in less than 24 hours at 11:00 AM Friday, July 19, 2019
>> (EDT).
>> 
>> Please download the release candidate and evaluate the necessary items
>> including checking hashes, signatures, build from source, and test.  Then
>> please vote:
>> 
>> [ ] +1 Release this package as rya-project-4.0.0
>> [ ] +0 no opinion
>> [ ] -1 Do not release this package because because...
>> 
>> On Wed, Jul 17, 2019 at 3:05 PM Aaron D. Mihalik <[email protected]>
>> wrote:
>> 
>>> Adina,
>>> 
>>> Thanks for taking the time to build and verify the release.
>>> 
>>> - Notice Issue:
>>> 
>>> I'll commit a change to master, but I don't think this should hold up the
>>> release.  If you (or others) think it's an issue, toss a '-1' vote on
>> this
>>> thread and that'll force em to fix it in the release :)
>>> 
>>> - Release Notes:
>>> 
>>> I'll double check all of the release notes and fix them.  I don't think
>>> this an issue to hold up the release (the notes aren't actually part of
>> the
>>> release, and 'll probably have them fixed before the end of the vote).
>>> 
>>> - Build issues:
>>> 
>>> Try using the flag -DskipTests (I don't think -Dskip-tests is valid).
>>> 
>>> The build issue is related to a test and it appears that the mongo client
>>> (Rya) cannot connect to the temporary mongo server that the plug-in sets
>>> up.  The server seems to start up and binds to localhost.  This could be
>> a
>>> firewall issue or an ip address issue (127.0.1.1 seems like a strange ip
>> in
>>> the connection string: WRK1065646GOVTu/127.0.1.1:27017).
>>> 
>>> I built Rya and ran all of the tests on both my personal macOS machine
>> (in
>>> order to sign the code and artifacts) and on AWS Linux on EC2 (for
>>> validation).  I've included my build notes below.
>>> 
>>> --Aaron
>>> 
>>> AMI: Amazon Linux AMI 2018.03.0 (HVM), SSD Volume Type
>>> Instance Type: t3a.xlarge
>>> 
>>> # configure repo to get maven
>>> sudo wget
>>> 
>> http://repos.fedorapeople.org/repos/dchen/apache-maven/epel-apache-maven.repo
>>> -O /etc/yum.repos.d/epel-apache-maven.repo
>>> sudo sed -i s/\$releasever/6/g /etc/yum.repos.d/epel-apache-maven.repo
>>> 
>>> # install maven, java 8 and git
>>> sudo yum install -y java-1.8.0-openjdk-devel git apache-maven
>>> 
>>> # change to java 8
>>> sudo update-alternatives --set java
>>> /usr/lib/jvm/jre-1.8.0-openjdk.x86_64/bin/java
>>> sudo update-alternatives --set javac
>>> /usr/lib/jvm/java-1.8.0-openjdk.x86_64/bin/javac
>>> 
>>> # This should fail
>>> ping $(hostname)
>>> 
>>> # add hostname in /etc/hosts
>>> hostname
>>> sudo vi /etc/hosts
>>> 
>>> # now this should work
>>> ping $(hostname)
>>> 
>>> git clone https://github.com/apache/incubator-rya.git
>>> cd incubator-rya
>>> mvn clean install
>>> 
>>> 
>>> On Wed, Jul 17, 2019 at 7:16 AM Adina Crainiceanu <[email protected]>
>> wrote:
>>> 
>>>> Hi,
>>>> 
>>>> I'm leaving on vacation today with no computer access, so I will not be
>>>> able to finish testing the release before Monday. This is what I have so
>>>> far:
>>>> 
>>>> -name includes incubating
>>>> -checksums correct (md5,sha1, sha512) (I did sha1sum filename and md5sum
>>>> filename)
>>>> -DISCLAIMER exists and has the correct content
>>>> -LICENSE exist and has the correct content (if we don't bundle any
>>>> dependencies)
>>>> -artifacts placed where expected in
>>>> https://dist.apache.org/repos/dist/dev/incubator/rya/
>>>> -no unexpected binaries in the .zip file
>>>> 
>>>> *-NOTICE needs to change year from 2018 to 2019!!!!*
>>>> - *ERROR: cannot build from source, with included tests (I did mvm clean
>>>> install and got errors)*
>>>> 
>>>> Additional question: I saw in the notes that Accumulo was upgraded to
>>>> 1.9.1, but in the pom the Accumulo version mentioned is 1.6.4. What is
>> the
>>>> Accumulo version for this release?
>>>> 
>>>> When trying, mvm clean install, I got a build error on rya.indexing.pcj.
>>>> How should I build Rya?
>>>> 
>>>> Here is part of the output from mvn clean install -Dskip-tests:
>>>> [INFO]
>>>> [INFO] --- animal-sniffer-maven-plugin:1.15:check (default) @ rya.sail
>> ---
>>>> [INFO] Checking unresolved references to
>>>> org.codehaus.mojo.signature:java18:1.0
>>>> [INFO]
>>>> [INFO] --- maven-jar-plugin:2.5:jar (default-jar) @ rya.sail ---
>>>> [INFO] Building jar:
>>>> 
>> /home/adina/Adina/Research/Rya/ApacheRya/RyaRelease40RC1/rya-project-4.0.0-incubating-source-release/rya-project-4.0.0-incubating/sail/target/rya.sail-4.0.0-incubating.jar
>>>> [INFO]
>>>> [INFO] --- maven-site-plugin:3.4:attach-descriptor (attach-descriptor) @
>>>> rya.sail ---
>>>> [INFO]
>>>> [INFO] --- maven-source-plugin:2.4:jar-no-fork (attach-sources) @
>>>> rya.sail ---
>>>> [INFO] Building jar:
>>>> 
>> /home/adina/Adina/Research/Rya/ApacheRya/RyaRelease40RC1/rya-project-4.0.0-incubating-source-release/rya-project-4.0.0-incubating/sail/target/rya.sail-4.0.0-incubating-sources.jar
>>>> [INFO]
>>>> [INFO] --- maven-failsafe-plugin:2.18.1:integration-test (default) @
>>>> rya.sail ---
>>>> [INFO] Tests are skipped.
>>>> [INFO]
>>>> [INFO] --- maven-failsafe-plugin:2.18.1:verify (default) @ rya.sail ---
>>>> [INFO] Tests are skipped.
>>>> [INFO]
>>>> [INFO] --- maven-checkstyle-plugin:2.17:check (check-style) @ rya.sail
>> ---
>>>> [INFO]
>>>> [INFO] --- maven-install-plugin:2.5.2:install (default-install) @
>>>> rya.sail ---
>>>> [INFO] Installing
>>>> 
>> /home/adina/Adina/Research/Rya/ApacheRya/RyaRelease40RC1/rya-project-4.0.0-incubating-source-release/rya-project-4.0.0-incubating/sail/target/rya.sail-4.0.0-incubating.jar
>>>> to
>>>> 
>> /home/adina/.m2/repository/org/apache/rya/rya.sail/4.0.0-incubating/rya.sail-4.0.0-incubating.jar
>>>> [INFO] Installing
>>>> 
>> /home/adina/Adina/Research/Rya/ApacheRya/RyaRelease40RC1/rya-project-4.0.0-incubating-source-release/rya-project-4.0.0-incubating/sail/pom.xml
>>>> to
>>>> 
>> /home/adina/.m2/repository/org/apache/rya/rya.sail/4.0.0-incubating/rya.sail-4.0.0-incubating.pom
>>>> [INFO] Installing
>>>> 
>> /home/adina/Adina/Research/Rya/ApacheRya/RyaRelease40RC1/rya-project-4.0.0-incubating-source-release/rya-project-4.0.0-incubating/sail/target/rya.sail-4.0.0-incubating-sources.jar
>>>> to
>>>> 
>> /home/adina/.m2/repository/org/apache/rya/rya.sail/4.0.0-incubating/rya.sail-4.0.0-incubating-sources.jar
>>>> [INFO]
>>>> [INFO] ------------------< org.apache.rya:rya.indexing.pcj
>>>>> -------------------
>>>> [INFO] Building Apache Rya PCJ Core 4.0.0-incubating
>>>> [17/69]
>>>> [INFO] --------------------------------[ jar
>>>> ]---------------------------------
>>>> [INFO]
>>>> [INFO] --- maven-clean-plugin:2.5:clean (default-clean) @
>>>> rya.indexing.pcj ---
>>>> [INFO] Deleting
>>>> 
>> /home/adina/Adina/Research/Rya/ApacheRya/RyaRelease40RC1/rya-project-4.0.0-incubating-source-release/rya-project-4.0.0-incubating/extras/rya.indexing.pcj/target
>>>> [INFO]
>>>> [INFO] --- apache-rat-plugin:0.11:check (check-licenses) @
>>>> rya.indexing.pcj ---
>>>> [INFO] 51 implicit excludes (use -debug for more details).
>>>> [INFO] Exclude: DEPENDENCIES
>>>> [INFO] 42 resources included (use -debug for more details)
>>>> [INFO] Rat check: Summary of files. Unapproved: 0 unknown: 0 generated:
>> 0
>>>> approved: 42 licence.
>>>> [INFO]
>>>> [INFO] --- maven-enforcer-plugin:1.3.1:enforce (enforce-mvn) @
>>>> rya.indexing.pcj ---
>>>> [INFO]
>>>> [INFO] --- maven-remote-resources-plugin:1.5:process (default) @
>>>> rya.indexing.pcj ---
>>>> [INFO]
>>>> [INFO] --- maven-resources-plugin:2.7:resources (default-resources) @
>>>> rya.indexing.pcj ---
>>>> [INFO] Using 'UTF-8' encoding to copy filtered resources.
>>>> [INFO] skip non existing resourceDirectory
>>>> 
>> /home/adina/Adina/Research/Rya/ApacheRya/RyaRelease40RC1/rya-project-4.0.0-incubating-source-release/rya-project-4.0.0-incubating/extras/rya.indexing.pcj/src/main/resources
>>>> [INFO] Copying 3 resources
>>>> [INFO]
>>>> [INFO] --- maven-compiler-plugin:3.2:compile (default-compile) @
>>>> rya.indexing.pcj ---
>>>> [INFO] Changes detected - recompiling the module!
>>>> [INFO] Compiling 26 source files to
>>>> 
>> /home/adina/Adina/Research/Rya/ApacheRya/RyaRelease40RC1/rya-project-4.0.0-incubating-source-release/rya-project-4.0.0-incubating/extras/rya.indexing.pcj/target/classes
>>>> [INFO]
>>>> [INFO] >>> findbugs-maven-plugin:3.0.5:check (analyze-compile) >
>>>> :findbugs @ rya.indexing.pcj >>>
>>>> [INFO]
>>>> [INFO] --- findbugs-maven-plugin:3.0.5:findbugs (findbugs) @
>>>> rya.indexing.pcj ---
>>>> [INFO] Fork Value is true
>>>> [INFO] Done FindBugs Analysis....
>>>> [INFO]
>>>> [INFO] <<< findbugs-maven-plugin:3.0.5:check (analyze-compile) <
>>>> :findbugs @ rya.indexing.pcj <<<
>>>> [INFO]
>>>> [INFO]
>>>> [INFO] --- findbugs-maven-plugin:3.0.5:check (analyze-compile) @
>>>> rya.indexing.pcj ---
>>>> [INFO] BugInstance size is 0
>>>> [INFO] Error size is 0
>>>> [INFO] No errors/warnings found
>>>> [INFO]
>>>> [INFO] --- maven-resources-plugin:2.7:testResources
>>>> (default-testResources) @ rya.indexing.pcj ---
>>>> [INFO] Using 'UTF-8' encoding to copy filtered resources.
>>>> [INFO] skip non existing resourceDirectory
>>>> 
>> /home/adina/Adina/Research/Rya/ApacheRya/RyaRelease40RC1/rya-project-4.0.0-incubating-source-release/rya-project-4.0.0-incubating/extras/rya.indexing.pcj/src/test/resources
>>>> [INFO] Copying 3 resources
>>>> [INFO]
>>>> [INFO] --- maven-compiler-plugin:3.2:testCompile (default-testCompile) @
>>>> rya.indexing.pcj ---
>>>> [INFO] Changes detected - recompiling the module!
>>>> [INFO] Compiling 15 source files to
>>>> 
>> /home/adina/Adina/Research/Rya/ApacheRya/RyaRelease40RC1/rya-project-4.0.0-incubating-source-release/rya-project-4.0.0-incubating/extras/rya.indexing.pcj/target/test-classes
>>>> [INFO]
>>>> 
>> /home/adina/Adina/Research/Rya/ApacheRya/RyaRelease40RC1/rya-project-4.0.0-incubating-source-release/rya-project-4.0.0-incubating/extras/rya.indexing.pcj/src/test/java/org/apache/rya/indexing/pcj/storage/accumulo/PcjTablesWithMockTest.java:
>>>> Some input files use unchecked or unsafe operations.
>>>> [INFO]
>>>> 
>> /home/adina/Adina/Research/Rya/ApacheRya/RyaRelease40RC1/rya-project-4.0.0-incubating-source-release/rya-project-4.0.0-incubating/extras/rya.indexing.pcj/src/test/java/org/apache/rya/indexing/pcj/storage/accumulo/PcjTablesWithMockTest.java:
>>>> Recompile with -Xlint:unchecked for details.
>>>> [INFO]
>>>> [INFO] --- maven-surefire-plugin:2.18.1:test (default-test) @
>>>> rya.indexing.pcj ---
>>>> [INFO] Surefire report directory:
>>>> 
>> /home/adina/Adina/Research/Rya/ApacheRya/RyaRelease40RC1/rya-project-4.0.0-incubating-source-release/rya-project-4.0.0-incubating/extras/rya.indexing.pcj/target/surefire-reports
>>>> 
>>>> -------------------------------------------------------
>>>> T E S T S
>>>> -------------------------------------------------------
>>>> Running org.apache.rya.indexing.pcj.storage.mongo.MongoPcjDocumentsTest
>>>> SLF4J: Class path contains multiple SLF4J bindings.
>>>> SLF4J: Found binding in
>>>> 
>> [jar:file:/home/adina/.m2/repository/org/slf4j/slf4j-log4j12/1.7.25/slf4j-log4j12-1.7.25.jar!/org/slf4j/impl/StaticLoggerBinder.class]
>>>> SLF4J: Found binding in
>>>> 
>> [jar:file:/home/adina/.m2/repository/ch/qos/logback/logback-classic/1.1.2/logback-classic-1.1.2.jar!/org/slf4j/impl/StaticLoggerBinder.class]
>>>> SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for an
>>>> explanation.
>>>> SLF4J: Actual binding is of type [org.slf4j.impl.Log4jLoggerFactory]
>>>> 2019-07-17 07:04:27 INFO  EmbeddedMongoFactory:42 - [mongod
>>>> output]2019-07-17T07:04:27.888-0400 I CONTROL  [main] note: noprealloc
>> may
>>>> hurt performance in many applications[mongod output]
>>>> 2019-07-17 07:04:27 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:27.892-0400 I CONTROL  [initandlisten] MongoDB
>> starting :
>>>> pid=4675 port=27017
>>>> 
>> dbpath=/home/adina/Adina/Research/Rya/ApacheRya/RyaRelease40RC1/rya-project-4.0.0-incubating-source-release/rya-project-4.0.0-incubating/extras/rya.indexing.pcj/target/embedmongo-db-77b97738-cc25-4c15-9152-2c7fc3842203
>>>> 64-bit host=WRK1065646GOVTu[mongod output]
>>>> 2019-07-17 07:04:27 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:27.892-0400 I CONTROL  [initandlisten] db version
>>>> v4.0.2[mongod output]
>>>> 2019-07-17 07:04:27 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:27.892-0400 I CONTROL  [initandlisten] git version:
>>>> fc1573ba18aee42f97a3bb13b67af7d837826b47[mongod output]
>>>> 2019-07-17 07:04:27 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:27.892-0400 I CONTROL  [initandlisten] allocator:
>>>> tcmalloc[mongod output]
>>>> 2019-07-17 07:04:27 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:27.892-0400 I CONTROL  [initandlisten] modules:
>>>> none[mongod output]
>>>> 2019-07-17 07:04:27 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:27.892-0400 I CONTROL  [initandlisten] build
>>>> environment:[mongod output]
>>>> 2019-07-17 07:04:27 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:27.892-0400 I CONTROL  [initandlisten]     distarch:
>>>> x86_64[mongod output]
>>>> 2019-07-17 07:04:27 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:27.892-0400 I CONTROL  [initandlisten]     target_arch:
>>>> x86_64[mongod output]
>>>> 2019-07-17 07:04:27 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:27.892-0400 I CONTROL  [initandlisten] options: { net:
>> {
>>>> port: 27017 }, security: { authorization: "disabled" }, storage: {
>> dbPath:
>>>> 
>> "/home/adina/Adina/Research/Rya/ApacheRya/RyaRelease40RC1/rya-project-4.0.0-incubating-source-release/rya-project-4.0.0-incubating/extras/rya.indexing....",
>>>> journal: { enabled: false }, mmapv1: { preallocDataFiles: false,
>>>> smallFiles: true }, syncPeriodSecs: 0.0 } }[mongod output]
>>>> 2019-07-17 07:04:27 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:27.892-0400 I STORAGE  [initandlisten] [mongod output]
>>>> 2019-07-17 07:04:27 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:27.892-0400 I STORAGE  [initandlisten] ** WARNING:
>> Using
>>>> the XFS filesystem is strongly recommended with the WiredTiger storage
>>>> engine[mongod output]
>>>> 2019-07-17 07:04:27 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:27.892-0400 I STORAGE  [initandlisten] **          See
>>>> http://dochub.mongodb.org/core/prodnotes-filesystem[mongod output]
>>>> 2019-07-17 07:04:27 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:27.892-0400 I STORAGE  [initandlisten] wiredtiger_open
>>>> config:
>>>> 
>> create,cache_size=3416M,session_max=20000,eviction=(threads_min=4,threads_max=4),config_base=false,statistics=(fast),log=(enabled=true,archive=true,path=journal,compressor=snappy),file_manager=(close_idle_time=100000),statistics_log=(wait=0),verbose=(recovery_progress),,log=(enabled=false),[mongod
>>>> output]
>>>> 2019-07-17 07:04:28 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:28.494-0400 I STORAGE  [initandlisten] WiredTiger
>> message
>>>> [1563361468:494258][4675:0x7fbf7c5499c0], txn-recover: Set global
>> recovery
>>>> timestamp: 0[mongod output]
>>>> 2019-07-17 07:04:28 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:28.548-0400 I RECOVERY [initandlisten] WiredTiger
>>>> recoveryTimestamp. Ts: Timestamp(0, 0)[mongod output]
>>>> 2019-07-17 07:04:28 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:28.691-0400 W STORAGE  [initandlisten] Detected
>>>> configuration for non-active storage engine mmapv1 when current storage
>>>> engine is wiredTiger[mongod output]
>>>> 2019-07-17 07:04:28 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:28.691-0400 I CONTROL  [initandlisten] [mongod output]
>>>> 2019-07-17 07:04:28 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:28.691-0400 I CONTROL  [initandlisten] ** WARNING: This
>>>> server is bound to localhost.[mongod output]
>>>> 2019-07-17 07:04:28 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:28.691-0400 I CONTROL  [initandlisten] **
>> Remote
>>>> systems will be unable to connect to this server. [mongod output]
>>>> 2019-07-17 07:04:28 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:28.691-0400 I CONTROL  [initandlisten] **
>> Start
>>>> the server with --bind_ip <address> to specify which IP [mongod output]
>>>> 2019-07-17 07:04:28 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:28.691-0400 I CONTROL  [initandlisten] **
>>>> addresses it should serve responses from, or with --bind_ip_all
>> to[mongod
>>>> output]
>>>> 2019-07-17 07:04:28 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:28.691-0400 I CONTROL  [initandlisten] **
>> bind to
>>>> all interfaces. If this behavior is desired, start the[mongod output]
>>>> 2019-07-17 07:04:28 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:28.691-0400 I CONTROL  [initandlisten] **
>> server
>>>> with --bind_ip 127.0.0.1 to disable this warning.[mongod output]
>>>> 2019-07-17 07:04:28 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:28.691-0400 I CONTROL  [initandlisten] [mongod output]
>>>> 2019-07-17 07:04:28 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:28.692-0400 I STORAGE  [initandlisten]
>> createCollection:
>>>> admin.system.version with provided UUID:
>>>> 767d343a-c6cf-4bc8-88ce-ac6616883c91[mongod output]
>>>> 2019-07-17 07:04:28 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:28.838-0400 I COMMAND  [initandlisten] setting
>>>> featureCompatibilityVersion to 4.0[mongod output]
>>>> 2019-07-17 07:04:28 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:28.850-0400 I STORAGE  [initandlisten]
>> createCollection:
>>>> local.startup_log with generated UUID:
>>>> 0d2ebf8d-321e-4d9b-9858-a0ed2c288681[mongod output]
>>>> 2019-07-17 07:04:29 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:29.041-0400 I FTDC     [initandlisten] Initializing
>>>> full-time diagnostic data capture with directory
>>>> 
>> '/home/adina/Adina/Research/Rya/ApacheRya/RyaRelease40RC1/rya-project-4.0.0-incubating-source-release/rya-project-4.0.0-incubating/extras/rya.indexing.pcj/target/embedmongo-db-77b97738-cc25-4c15-9152-2c7fc3842203/diagnostic.data'[mongod
>>>> output]
>>>> 2019-07-17 07:04:29 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:29.043-0400 I NETWORK  [initandlisten] waiting for
>>>> connections on port 27017[mongod output]
>>>> 2019-07-17 07:04:29 INFO  MongodExecutable:109 - start
>>>> 
>> de.flapdoodle.embed.mongo.config.MongodConfigBuilder$ImmutableMongodConfig@45f45fa1
>>>> 2019-07-17 07:04:29 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:29.044-0400 I STORAGE  [LogicalSessionCacheRefresh]
>>>> createCollection: config.system.sessions with generated UUID:
>>>> 64521141-97ff-41c1-8933-33a1e64a8f34[mongod output]
>>>> 2019-07-17 07:04:29 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:29.288-0400 I INDEX    [LogicalSessionCacheRefresh]
>> build
>>>> index on: config.system.sessions properties: { v: 2, key: { lastUse: 1
>> },
>>>> name: "lsidTTLIndex", ns: "config.system.sessions", expireAfterSeconds:
>>>> 1800 }[mongod output]
>>>> 2019-07-17 07:04:29 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:29.288-0400 I INDEX    [LogicalSessionCacheRefresh]
>>>> building index using bulk method; build may temporarily use up to 500
>>>> megabytes of RAM[mongod output]
>>>> 2019-07-17 07:04:29 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:29.289-0400 I INDEX    [LogicalSessionCacheRefresh]
>> build
>>>> index done.  scanned 0 total records. 0 secs[mongod output]
>>>> 2019-07-17 07:04:29 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:04:29.289-0400 I COMMAND  [LogicalSessionCacheRefresh]
>>>> command config.$cmd command: createIndexes { createIndexes:
>>>> "system.sessions", indexes: [ { key: { lastUse: 1 }, name:
>> "lsidTTLIndex",
>>>> expireAfterSeconds: 1800 } ], $db: "config" } numYields:0 reslen:114
>>>> locks:{ Global: { acquireCount: { r: 1, w: 1 } }, Database: {
>> acquireCount:
>>>> { W: 1 } }, Collection: { acquireCount: { w: 1 } } } protocol:op_msg
>>>> 244ms[mongod output]
>>>> 2019-07-17 07:04:29 INFO  cluster:71 - Cluster created with settings
>>>> {hosts=[wrk1065646govtu:27017], mode=SINGLE,
>> requiredClusterType=UNKNOWN,
>>>> serverSelectionTimeout='30000 ms', maxWaitQueueSize=500}
>>>> 2019-07-17 07:04:29 INFO  cluster:76 - Exception in monitor thread while
>>>> connecting to server wrk1065646govtu:27017
>>>> com.mongodb.MongoSocketOpenException: Exception opening socket
>>>> at
>> com.mongodb.internal.connection.SocketStream.open(SocketStream.java:70)
>>>> at
>>>> 
>> com.mongodb.internal.connection.InternalStreamConnection.open(InternalStreamConnection.java:126)
>>>> at
>>>> 
>> com.mongodb.internal.connection.DefaultServerMonitor$ServerMonitorRunnable.run(DefaultServerMonitor.java:117)
>>>> at java.lang.Thread.run(Thread.java:748)
>>>> Caused by: java.net.ConnectException: Connection refused (Connection
>>>> refused)
>>>> at java.net.PlainSocketImpl.socketConnect(Native Method)
>>>> at
>>>> java.net
>> .AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:350)
>>>> at
>>>> java.net
>> .AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:206)
>>>> at
>>>> java.net
>> .AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:188)
>>>> at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392)
>>>> at java.net.Socket.connect(Socket.java:589)
>>>> at
>>>> 
>> com.mongodb.internal.connection.SocketStreamHelper.initialize(SocketStreamHelper.java:64)
>>>> at
>>>> 
>> com.mongodb.internal.connection.SocketStream.initializeSocket(SocketStream.java:79)
>>>> at
>> com.mongodb.internal.connection.SocketStream.open(SocketStream.java:65)
>>>> ... 3 more
>>>> 2019-07-17 07:04:29 INFO  cluster:71 - Cluster description not yet
>>>> available. Waiting for 30000 ms before timing out
>>>> 2019-07-17 07:04:59 INFO  cluster:71 - Cluster created with settings
>>>> {hosts=[wrk1065646govtu:27017], mode=SINGLE,
>> requiredClusterType=UNKNOWN,
>>>> serverSelectionTimeout='30000 ms', maxWaitQueueSize=500}
>>>> 2019-07-17 07:04:59 INFO  cluster:71 - Cluster description not yet
>>>> available. Waiting for 30000 ms before timing out
>>>> 2019-07-17 07:04:59 INFO  cluster:76 - Exception in monitor thread while
>>>> connecting to server wrk1065646govtu:27017
>>>> com.mongodb.MongoSocketOpenException: Exception opening socket
>>>> at
>> com.mongodb.internal.connection.SocketStream.open(SocketStream.java:70)
>>>> at
>>>> 
>> com.mongodb.internal.connection.InternalStreamConnection.open(InternalStreamConnection.java:126)
>>>> at
>>>> 
>> com.mongodb.internal.connection.DefaultServerMonitor$ServerMonitorRunnable.run(DefaultServerMonitor.java:117)
>>>> at java.lang.Thread.run(Thread.java:748)
>>>> Caused by: java.net.ConnectException: Connection refused (Connection
>>>> refused)
>>>> at java.net.PlainSocketImpl.socketConnect(Native Method)
>>>> at
>>>> java.net
>> .AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:350)
>>>> at
>>>> java.net
>> .AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:206)
>>>> at
>>>> java.net
>> .AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:188)
>>>> at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392)
>>>> at java.net.Socket.connect(Socket.java:589)
>>>> at
>>>> 
>> com.mongodb.internal.connection.SocketStreamHelper.initialize(SocketStreamHelper.java:64)
>>>> at
>>>> 
>> com.mongodb.internal.connection.SocketStream.initializeSocket(SocketStream.java:79)
>>>> at
>> com.mongodb.internal.connection.SocketStream.open(SocketStream.java:65)
>>>> ... 3 more
>>>> Tests run: 2, Failures: 0, Errors: 2, Skipped: 0, Time elapsed: 61.988
>>>> sec <<< FAILURE! - in
>>>> org.apache.rya.indexing.pcj.storage.mongo.MongoPcjDocumentsTest
>>>> 
>> pcjToMetadata(org.apache.rya.indexing.pcj.storage.mongo.MongoPcjDocumentsTest)
>>>> Time elapsed: 31.971 sec  <<< ERROR!
>>>> com.mongodb.MongoTimeoutException: Timed out after 30000 ms while
>> waiting
>>>> to connect. Client view of cluster state is {type=UNKNOWN,
>>>> servers=[{address=wrk1065646govtu:27017, type=UNKNOWN, state=CONNECTING,
>>>> exception={com.mongodb.MongoSocketOpenException: Exception opening
>> socket},
>>>> caused by {java.net.ConnectException: Connection refused (Connection
>>>> refused)}}]
>>>> at
>>>> 
>> com.mongodb.internal.connection.BaseCluster.getDescription(BaseCluster.java:182)
>>>> at
>>>> 
>> com.mongodb.internal.connection.SingleServerCluster.getDescription(SingleServerCluster.java:41)
>>>> at
>>>> 
>> com.mongodb.client.internal.MongoClientDelegate.getConnectedClusterDescription(MongoClientDelegate.java:136)
>>>> at
>>>> 
>> com.mongodb.client.internal.MongoClientDelegate.createClientSession(MongoClientDelegate.java:94)
>>>> at
>>>> 
>> com.mongodb.client.internal.MongoClientDelegate$DelegateOperationExecutor.getClientSession(MongoClientDelegate.java:249)
>>>> at
>>>> 
>> com.mongodb.client.internal.MongoClientDelegate$DelegateOperationExecutor.execute(MongoClientDelegate.java:172)
>>>> at
>>>> 
>> com.mongodb.client.internal.MongoIterableImpl.execute(MongoIterableImpl.java:132)
>>>> at
>>>> 
>> com.mongodb.client.internal.MongoIterableImpl.iterator(MongoIterableImpl.java:86)
>>>> at
>>>> 
>> com.mongodb.client.internal.MappingIterable.iterator(MappingIterable.java:39)
>>>> at org.apache.rya.test.mongo.MongoITBase.setupTest(MongoITBase.java:39)
>>>> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>>>> at
>>>> 
>> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
>>>> at
>>>> 
>> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
>>>> at java.lang.reflect.Method.invoke(Method.java:498)
>>>> at
>>>> 
>> org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:50)
>>>> at
>>>> 
>> org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:12)
>>>> at
>>>> 
>> org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:47)
>>>> at
>>>> 
>> org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:24)
>>>> at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:325)
>>>> at
>>>> 
>> org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:78)
>>>> at
>>>> 
>> org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:57)
>>>> at org.junit.runners.ParentRunner$3.run(ParentRunner.java:290)
>>>> at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:71)
>>>> at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:288)
>>>> at org.junit.runners.ParentRunner.access$000(ParentRunner.java:58)
>>>> at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:268)
>>>> at org.junit.runners.ParentRunner.run(ParentRunner.java:363)
>>>> at
>>>> 
>> org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:283)
>>>> at
>>>> 
>> org.apache.maven.surefire.junit4.JUnit4Provider.executeWithRerun(JUnit4Provider.java:173)
>>>> at
>>>> 
>> org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:153)
>>>> at
>>>> 
>> org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:128)
>>>> at
>>>> 
>> org.apache.maven.surefire.booter.ForkedBooter.invokeProviderInSameClassLoader(ForkedBooter.java:203)
>>>> at
>>>> 
>> org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:155)
>>>> at
>>>> 
>> org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:103)
>>>> 
>>>> 
>> metadataExists(org.apache.rya.indexing.pcj.storage.mongo.MongoPcjDocumentsTest)
>>>> Time elapsed: 30.003 sec  <<< ERROR!
>>>> com.mongodb.MongoTimeoutException: Timed out after 30000 ms while
>> waiting
>>>> to connect. Client view of cluster state is {type=UNKNOWN,
>>>> servers=[{address=wrk1065646govtu:27017, type=UNKNOWN, state=CONNECTING,
>>>> exception={com.mongodb.MongoSocketOpenException: Exception opening
>> socket},
>>>> caused by {java.net.ConnectException: Connection refused (Connection
>>>> refused)}}]
>>>> at
>>>> 
>> com.mongodb.internal.connection.BaseCluster.getDescription(BaseCluster.java:182)
>>>> at
>>>> 
>> com.mongodb.internal.connection.SingleServerCluster.getDescription(SingleServerCluster.java:41)
>>>> at
>>>> 
>> com.mongodb.client.internal.MongoClientDelegate.getConnectedClusterDescription(MongoClientDelegate.java:136)
>>>> at
>>>> 
>> com.mongodb.client.internal.MongoClientDelegate.createClientSession(MongoClientDelegate.java:94)
>>>> at
>>>> 
>> com.mongodb.client.internal.MongoClientDelegate$DelegateOperationExecutor.getClientSession(MongoClientDelegate.java:249)
>>>> at
>>>> 
>> com.mongodb.client.internal.MongoClientDelegate$DelegateOperationExecutor.execute(MongoClientDelegate.java:172)
>>>> at
>>>> 
>> com.mongodb.client.internal.MongoIterableImpl.execute(MongoIterableImpl.java:132)
>>>> at
>>>> 
>> com.mongodb.client.internal.MongoIterableImpl.iterator(MongoIterableImpl.java:86)
>>>> at
>>>> 
>> com.mongodb.client.internal.MappingIterable.iterator(MappingIterable.java:39)
>>>> at org.apache.rya.test.mongo.MongoITBase.setupTest(MongoITBase.java:39)
>>>> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>>>> at
>>>> 
>> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
>>>> at
>>>> 
>> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
>>>> at java.lang.reflect.Method.invoke(Method.java:498)
>>>> at
>>>> 
>> org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:50)
>>>> at
>>>> 
>> org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:12)
>>>> at
>>>> 
>> org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:47)
>>>> at
>>>> 
>> org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:24)
>>>> at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:325)
>>>> at
>>>> 
>> org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:78)
>>>> at
>>>> 
>> org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:57)
>>>> at org.junit.runners.ParentRunner$3.run(ParentRunner.java:290)
>>>> at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:71)
>>>> at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:288)
>>>> at org.junit.runners.ParentRunner.access$000(ParentRunner.java:58)
>>>> at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:268)
>>>> at org.junit.runners.ParentRunner.run(ParentRunner.java:363)
>>>> at
>>>> 
>> org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:283)
>>>> at
>>>> 
>> org.apache.maven.surefire.junit4.JUnit4Provider.executeWithRerun(JUnit4Provider.java:173)
>>>> at
>>>> 
>> org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:153)
>>>> at
>>>> 
>> org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:128)
>>>> at
>>>> 
>> org.apache.maven.surefire.booter.ForkedBooter.invokeProviderInSameClassLoader(ForkedBooter.java:203)
>>>> at
>>>> 
>> org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:155)
>>>> at
>>>> 
>> org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:103)
>>>> 
>>>> Running
>> org.apache.rya.indexing.pcj.storage.mongo.PcjDocumentsWithMockTest
>>>> 2019-07-17 07:05:29 INFO  cluster:71 - Cluster created with settings
>>>> {hosts=[wrk1065646govtu:27017], mode=SINGLE,
>> requiredClusterType=UNKNOWN,
>>>> serverSelectionTimeout='30000 ms', maxWaitQueueSize=500}
>>>> 2019-07-17 07:05:29 INFO  cluster:76 - Exception in monitor thread while
>>>> connecting to server wrk1065646govtu:27017
>>>> com.mongodb.MongoSocketOpenException: Exception opening socket
>>>> at
>> com.mongodb.internal.connection.SocketStream.open(SocketStream.java:70)
>>>> at
>>>> 
>> com.mongodb.internal.connection.InternalStreamConnection.open(InternalStreamConnection.java:126)
>>>> at
>>>> 
>> com.mongodb.internal.connection.DefaultServerMonitor$ServerMonitorRunnable.run(DefaultServerMonitor.java:117)
>>>> at java.lang.Thread.run(Thread.java:748)
>>>> Caused by: java.net.ConnectException: Connection refused (Connection
>>>> refused)
>>>> at java.net.PlainSocketImpl.socketConnect(Native Method)
>>>> at
>>>> java.net
>> .AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:350)
>>>> at
>>>> java.net
>> .AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:206)
>>>> at
>>>> java.net
>> .AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:188)
>>>> at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392)
>>>> at java.net.Socket.connect(Socket.java:589)
>>>> at
>>>> 
>> com.mongodb.internal.connection.SocketStreamHelper.initialize(SocketStreamHelper.java:64)
>>>> at
>>>> 
>> com.mongodb.internal.connection.SocketStream.initializeSocket(SocketStream.java:79)
>>>> at
>> com.mongodb.internal.connection.SocketStream.open(SocketStream.java:65)
>>>> ... 3 more
>>>> 2019-07-17 07:05:29 INFO  cluster:71 - Cluster description not yet
>>>> available. Waiting for 30000 ms before timing out
>>>> Tests run: 1, Failures: 0, Errors: 1, Skipped: 0, Time elapsed: 29.977
>>>> sec <<< FAILURE! - in
>>>> org.apache.rya.indexing.pcj.storage.mongo.PcjDocumentsWithMockTest
>>>> 
>> populatePcj(org.apache.rya.indexing.pcj.storage.mongo.PcjDocumentsWithMockTest)
>>>> Time elapsed: 29.977 sec  <<< ERROR!
>>>> com.mongodb.MongoTimeoutException: Timed out after 30000 ms while
>> waiting
>>>> to connect. Client view of cluster state is {type=UNKNOWN,
>>>> servers=[{address=wrk1065646govtu:27017, type=UNKNOWN, state=CONNECTING,
>>>> exception={com.mongodb.MongoSocketOpenException: Exception opening
>> socket},
>>>> caused by {java.net.ConnectException: Connection refused (Connection
>>>> refused)}}]
>>>> at
>>>> 
>> com.mongodb.internal.connection.BaseCluster.getDescription(BaseCluster.java:182)
>>>> at
>>>> 
>> com.mongodb.internal.connection.SingleServerCluster.getDescription(SingleServerCluster.java:41)
>>>> at
>>>> 
>> com.mongodb.client.internal.MongoClientDelegate.getConnectedClusterDescription(MongoClientDelegate.java:136)
>>>> at
>>>> 
>> com.mongodb.client.internal.MongoClientDelegate.createClientSession(MongoClientDelegate.java:94)
>>>> at
>>>> 
>> com.mongodb.client.internal.MongoClientDelegate$DelegateOperationExecutor.getClientSession(MongoClientDelegate.java:249)
>>>> at
>>>> 
>> com.mongodb.client.internal.MongoClientDelegate$DelegateOperationExecutor.execute(MongoClientDelegate.java:172)
>>>> at
>>>> 
>> com.mongodb.client.internal.MongoIterableImpl.execute(MongoIterableImpl.java:132)
>>>> at
>>>> 
>> com.mongodb.client.internal.MongoIterableImpl.iterator(MongoIterableImpl.java:86)
>>>> at
>>>> 
>> com.mongodb.client.internal.MappingIterable.iterator(MappingIterable.java:39)
>>>> at org.apache.rya.test.mongo.MongoITBase.setupTest(MongoITBase.java:39)
>>>> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>>>> at
>>>> 
>> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
>>>> at
>>>> 
>> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
>>>> at java.lang.reflect.Method.invoke(Method.java:498)
>>>> at
>>>> 
>> org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:50)
>>>> at
>>>> 
>> org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:12)
>>>> at
>>>> 
>> org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:47)
>>>> at
>>>> 
>> org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:24)
>>>> at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:325)
>>>> at
>>>> 
>> org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:78)
>>>> at
>>>> 
>> org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:57)
>>>> at org.junit.runners.ParentRunner$3.run(ParentRunner.java:290)
>>>> at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:71)
>>>> at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:288)
>>>> at org.junit.runners.ParentRunner.access$000(ParentRunner.java:58)
>>>> at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:268)
>>>> at org.junit.runners.ParentRunner.run(ParentRunner.java:363)
>>>> at
>>>> 
>> org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:283)
>>>> at
>>>> 
>> org.apache.maven.surefire.junit4.JUnit4Provider.executeWithRerun(JUnit4Provider.java:173)
>>>> at
>>>> 
>> org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:153)
>>>> at
>>>> 
>> org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:128)
>>>> at
>>>> 
>> org.apache.maven.surefire.booter.ForkedBooter.invokeProviderInSameClassLoader(ForkedBooter.java:203)
>>>> at
>>>> 
>> org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:155)
>>>> at
>>>> 
>> org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:103)
>>>> 
>>>> Running
>> org.apache.rya.indexing.pcj.storage.accumulo.PcjTablesWithMockTest
>>>> 2019-07-17 07:05:59 INFO  deprecation:1019 - fs.default.name is
>>>> deprecated. Instead, use fs.defaultFS
>>>> 2019-07-17 07:05:59 WARN  NativeCodeLoader:62 - Unable to load
>>>> native-hadoop library for your platform... using builtin-java classes
>> where
>>>> applicable
>>>> 2019-07-17 07:06:00 INFO  PcjTablesWithMockTest:117 - Shutting down Rya
>>>> Connection.
>>>> 2019-07-17 07:06:00 INFO  PcjTablesWithMockTest:119 - Rya Connection
>> shut
>>>> down.
>>>> 2019-07-17 07:06:00 INFO  PcjTablesWithMockTest:127 - Shutting down Rya
>>>> Repo.
>>>> 2019-07-17 07:06:00 INFO  PcjTablesWithMockTest:129 - Rya Repo shut
>> down.
>>>> Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.089
>> sec
>>>> - in org.apache.rya.indexing.pcj.storage.accumulo.PcjTablesWithMockTest
>>>> Running
>>>> org.apache.rya.indexing.pcj.storage.accumulo.PcjTableNameFactoryTest
>>>> Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001
>> sec
>>>> - in
>> org.apache.rya.indexing.pcj.storage.accumulo.PcjTableNameFactoryTest
>>>> Running
>>>> 
>> org.apache.rya.indexing.pcj.storage.accumulo.VisibilityBindingSetSerDeTest
>>>> Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.021
>> sec
>>>> - in
>>>> 
>> org.apache.rya.indexing.pcj.storage.accumulo.VisibilityBindingSetSerDeTest
>>>> Running org.apache.rya.indexing.pcj.storage.accumulo.PcjTablesTest
>>>> Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.005
>> sec
>>>> - in org.apache.rya.indexing.pcj.storage.accumulo.PcjTablesTest
>>>> Running
>>>> 
>> org.apache.rya.indexing.pcj.storage.accumulo.VisibilityBindingSetStringConverterTest
>>>> Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 sec -
>>>> in
>>>> 
>> org.apache.rya.indexing.pcj.storage.accumulo.VisibilityBindingSetStringConverterTest
>>>> Running
>>>> org.apache.rya.indexing.pcj.storage.accumulo.AccumuloPcjSerializerTest
>>>> Tests run: 8, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 sec -
>>>> in
>> org.apache.rya.indexing.pcj.storage.accumulo.AccumuloPcjSerializerTest
>>>> Running
>>>> org.apache.rya.indexing.pcj.storage.accumulo.ShiftVarOrderFactoryTest
>>>> Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 sec -
>>>> in org.apache.rya.indexing.pcj.storage.accumulo.ShiftVarOrderFactoryTest
>>>> Running
>>>> 
>> org.apache.rya.indexing.pcj.storage.accumulo.BindingSetStringConverterTest
>>>> Tests run: 14, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 sec -
>>>> in
>>>> 
>> org.apache.rya.indexing.pcj.storage.accumulo.BindingSetStringConverterTest
>>>> 2019-07-17 07:06:00 WARN  Mongod:104 - sendShutdown WRK1065646GOVTu/
>>>> 127.0.1.1:27017
>>>> java.net.ConnectException: Connection refused (Connection refused)
>>>> at java.net.PlainSocketImpl.socketConnect(Native Method)
>>>> at
>>>> java.net
>> .AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:350)
>>>> at
>>>> java.net
>> .AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:206)
>>>> at
>>>> java.net
>> .AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:188)
>>>> at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392)
>>>> at java.net.Socket.connect(Socket.java:589)
>>>> at de.flapdoodle.embed.mongo.runtime.Mongod.sendShutdown(Mongod.java:88)
>>>> at
>>>> 
>> de.flapdoodle.embed.mongo.AbstractMongoProcess.sendStopToMongoInstance(AbstractMongoProcess.java:133)
>>>> at
>>>> 
>> de.flapdoodle.embed.mongo.AbstractMongoProcess.stopInternal(AbstractMongoProcess.java:107)
>>>> at
>>>> 
>> de.flapdoodle.embed.process.runtime.AbstractProcess.stop(AbstractProcess.java:177)
>>>> at
>> de.flapdoodle.embed.process.runtime.Executable.stop(Executable.java:80)
>>>> at
>>>> 
>> de.flapdoodle.embed.process.runtime.Executable$JobKiller.run(Executable.java:97)
>>>> at java.lang.Thread.run(Thread.java:748)
>>>> 2019-07-17 07:06:00 WARN  AbstractMongoProcess:108 - could not stop
>>>> mongod with db command, try next
>>>> 2019-07-17 07:06:00 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:06:00.736-0400 I CONTROL  [signalProcessingThread] got
>> signal
>>>> 2 (Interrupt), will terminate after current cmd ends[mongod output]
>>>> 2019-07-17 07:06:00 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:06:00.736-0400 I NETWORK  [signalProcessingThread]
>> shutdown:
>>>> going to close listening sockets...[mongod output]
>>>> 2019-07-17 07:06:00 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:06:00.736-0400 I NETWORK  [signalProcessingThread]
>> removing
>>>> socket file: /tmp/mongodb-27017.sock[mongod output]
>>>> 2019-07-17 07:06:00 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:06:00.737-0400 I FTDC     [signalProcessingThread]
>> Shutting
>>>> down full-time diagnostic data capture[mongod output]
>>>> 2019-07-17 07:06:00 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:06:00.739-0400 I STORAGE  [signalProcessingThread]
>>>> WiredTigerKVEngine shutting down[mongod output]
>>>> 2019-07-17 07:06:00 INFO  ProcessControl:239 - execSuccess: true [kill,
>>>> -2, 4675]
>>>> 2019-07-17 07:06:00 INFO  ProcessControl:101 - stopOrDestroyProcess:
>>>> process hasn't exited
>>>> 2019-07-17 07:06:00 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:06:00.762-0400 I STORAGE  [signalProcessingThread]
>> shutdown:
>>>> removing fs lock...[mongod output]
>>>> 2019-07-17 07:06:00 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:06:00.762-0400 I CONTROL  [signalProcessingThread] now
>>>> exiting[mongod output]
>>>> 2019-07-17 07:06:00 INFO  EmbeddedMongoFactory:42 -
>>>> 2019-07-17T07:06:00.762-0400 I CONTROL  [signalProcessingThread]
>> shutting
>>>> down with code:0[mongod output]
>>>> 
>>>> Results :
>>>> 
>>>> Tests in error:
>>>>  MongoPcjDocumentsTest>MongoITBase.setupTest:39 » MongoTimeout Timed
>> out
>>>> after ...
>>>>  MongoPcjDocumentsTest>MongoITBase.setupTest:39 » MongoTimeout Timed
>> out
>>>> after ...
>>>>  PcjDocumentsWithMockTest>MongoITBase.setupTest:39 » MongoTimeout Timed
>>>> out aft...
>>>> 
>>>> Tests run: 43, Failures: 0, Errors: 3, Skipped: 0
>>>> 
>>>> [INFO]
>>>> ------------------------------------------------------------------------
>>>> [INFO] Reactor Summary for Apache Rya Project 4.0.0-incubating:
>>>> [INFO]
>>>> [INFO] Apache Rya Project ................................. SUCCESS [
>>>> 4.927 s]
>>>> [INFO] Apache Rya Common Projects ......................... SUCCESS [
>>>> 0.687 s]
>>>> [INFO] Apache Rya Common API .............................. SUCCESS [
>>>> 14.772 s]
>>>> [INFO] Apache Rya Common API - Models ..................... SUCCESS [
>>>> 4.443 s]
>>>> [INFO] Apache Rya Common API - Evaluation Functions ....... SUCCESS [
>>>> 5.531 s]
>>>> [INFO] Apache Rya Provenance .............................. SUCCESS [
>>>> 10.210 s]
>>>> [INFO] Apache Rya Test Parent ............................. SUCCESS [
>>>> 0.595 s]
>>>> [INFO] Apache Rya Test Accumulo ........................... SUCCESS [
>>>> 7.810 s]
>>>> [INFO] Apache Rya DAO Projects ............................ SUCCESS [
>>>> 0.674 s]
>>>> [INFO] Apache Rya Accumulo DAO ............................ SUCCESS [
>>>> 13.779 s]
>>>> [INFO] Apache Rya Test Mongo DB ........................... SUCCESS [
>>>> 4.254 s]
>>>> [INFO] Apache Rya MongoDB DAO ............................. SUCCESS [
>>>> 12.126 s]
>>>> [INFO] Apache Rya Extra Projects .......................... SUCCESS [
>>>> 0.720 s]
>>>> [INFO] Apache Rya Prospector .............................. SUCCESS [
>>>> 42.274 s]
>>>> [INFO] Apache Rya Manual .................................. SUCCESS [
>>>> 1.033 s]
>>>> [INFO] Apache Rya SAIL .................................... SUCCESS [
>>>> 17.715 s]
>>>> [INFO] Apache Rya PCJ Core ................................ FAILURE
>>>> [01:41 min]
>>>> [INFO] Apache Rya Periodic Notification Parent ............ SKIPPED
>>>> [INFO] Apache Rya Periodic Notification API ............... SKIPPED
>>>> [INFO] Apache Rya PCJ Fluo Parent ......................... SKIPPED
>>>> [INFO] Apache Rya PCJ Fluo App ............................ SKIPPED
>>>> [INFO] Apache Rya PCJ Fluo API ............................ SKIPPED
>>>> [INFO] Apache Rya Secondary Indexing ...................... SKIPPED
>>>> [INFO] Apache Rya Periodic Notification Service ........... SKIPPED
>>>> [INFO] Apache Rya Periodic Notification Service on Twill .. SKIPPED
>>>> [INFO] Apache Rya Periodic Notification Service on Twill on YARN SKIPPED
>>>> [INFO] Apache Rya Test Kafka .............................. SKIPPED
>>>> [INFO] Apache Rya PCJ Fluo Client ......................... SKIPPED
>>>> [INFO] Apache Rya Integration Base ........................ SKIPPED
>>>> [INFO] Apache Rya Periodic Notification Service Integration Tests
>> SKIPPED
>>>> [INFO] Apache Rya Streams Parent .......................... SKIPPED
>>>> [INFO] Apache Rya Streams API ............................. SKIPPED
>>>> [INFO] Apache Rya Test RDF ................................ SKIPPED
>>>> [INFO] Apache Rya Streams Kafka ........................... SKIPPED
>>>> [INFO] Apache Rya Shell ................................... SKIPPED
>>>> [INFO] Apache Rya Secondary Indexing Example .............. SKIPPED
>>>> [INFO] Apache Rya MapReduce Tools ......................... SKIPPED
>>>> [INFO] Apache Rya Reasoning ............................... SKIPPED
>>>> [INFO] Apache Rya Vagrant VM .............................. SKIPPED
>>>> [INFO] Apache Rya PCJ Fluo Integration Tests .............. SKIPPED
>>>> [INFO] Apache Rya PCJ Fluo Demo ........................... SKIPPED
>>>> [INFO] Apache Rya Export Parent ........................... SKIPPED
>>>> [INFO] Apache Rya Export API .............................. SKIPPED
>>>> [INFO] Apache Rya Export Accumulo ......................... SKIPPED
>>>> [INFO] Apache Rya Export Mongo ............................ SKIPPED
>>>> [INFO] Apache Rya Export Client ........................... SKIPPED
>>>> [INFO] Apache Rya Export Integration Tests ................ SKIPPED
>>>> [INFO] Apache Rya Merge Tool .............................. SKIPPED
>>>> [INFO] Apache Rya Streams Kafka Test ...................... SKIPPED
>>>> [INFO] Apache Rya Streams Client .......................... SKIPPED
>>>> [INFO] Apache Rya Streams Kafka Integration Tests ......... SKIPPED
>>>> [INFO] Apache Rya Streams Query Manager ................... SKIPPED
>>>> [INFO] Apache Rya Forward Chaining Inference .............. SKIPPED
>>>> [INFO] Apache Rya Kafka Connect Parent .................... SKIPPED
>>>> [INFO] Apache Rya Kafka Connect - API ..................... SKIPPED
>>>> [INFO] Apache Rya Kafka Connect - Accumulo ................ SKIPPED
>>>> [INFO] Apache Rya Kafka Connect - Accumulo Integration Tests SKIPPED
>>>> [INFO] Apache Rya Kafka Connect - Mongo DB ................ SKIPPED
>>>> [INFO] Apache Rya Kafka Connect - Mongo DB Integration Tests SKIPPED
>>>> [INFO] Apache Rya Kafka Connect - Client .................. SKIPPED
>>>> [INFO] Apache Rya OSGI Bundle ............................. SKIPPED
>>>> [INFO] Apache Rya ALX ..................................... SKIPPED
>>>> [INFO] Apache Rya ALX Console ............................. SKIPPED
>>>> [INFO] Apache Rya Camel ................................... SKIPPED
>>>> [INFO] Apache Rya Pig Projects ............................ SKIPPED
>>>> [INFO] Apache Rya Accumulo Pig ............................ SKIPPED
>>>> [INFO] Apache Rya Spark Support ........................... SKIPPED
>>>> [INFO] Apache Rya Web Projects ............................ SKIPPED
>>>> [INFO] Apache Rya Web Implementation ...................... SKIPPED
>>>> [INFO]
>>>> ------------------------------------------------------------------------
>>>> [INFO] BUILD FAILURE
>>>> [INFO]
>>>> ------------------------------------------------------------------------
>>>> [INFO] Total time:  04:03 min
>>>> [INFO] Finished at: 2019-07-17T07:06:00-04:00
>>>> [INFO]
>>>> ------------------------------------------------------------------------
>>>> [ERROR] Failed to execute goal
>>>> org.apache.maven.plugins:maven-surefire-plugin:2.18.1:test
>> (default-test)
>>>> on project rya.indexing.pcj: There are test failures.
>>>> [ERROR]
>>>> [ERROR] Please refer to
>>>> 
>> /home/adina/Adina/Research/Rya/ApacheRya/RyaRelease40RC1/rya-project-4.0.0-incubating-source-release/rya-project-4.0.0-incubating/extras/rya.indexing.pcj/target/surefire-reports
>>>> for the individual test results.
>>>> [ERROR] -> [Help 1]
>>>> [ERROR]
>>>> [ERROR] To see the full stack trace of the errors, re-run Maven with the
>>>> -e switch.
>>>> [ERROR] Re-run Maven using the -X switch to enable full debug logging.
>>>> [ERROR]
>>>> [ERROR] For more information about the errors and possible solutions,
>>>> please read the following articles:
>>>> [ERROR] [Help 1]
>>>> http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException
>>>> [ERROR]
>>>> 
>>>> 
>>>> On Tue, Jul 16, 2019 at 10:55 AM Aaron D. Mihalik <
>>>> [email protected]> wrote:
>>>> 
>>>>> I am pleased to be calling this vote for the source release of Apache
>> Rya
>>>>> (Incubating), version 4.0.0.
>>>>> 
>>>>> The source zip, including signatures, digests, etc. can be found at:
>>>>> 
>>>>> 
>> https://dist.apache.org/repos/dist/dev/incubator/rya/rya-incubating-4.0.0-rc1/
>>>>> 
>>>>> Ancillary artifacts such as poms, jars, wars, ect. can be found here:
>>>>> 
>>>>> 
>> https://repository.apache.org/content/repositories/orgapacherya-1011/org/apache/rya/
>>>>> 
>>>>> The Git tag is rya-incubating-4.0.0-rc1
>>>>> The Git commit ID is 824090ac1b33c3b4ba52bfb8a67abfdc4f0ceea3
>>>>> 
>>>>> 
>> https://gitbox.apache.org/repos/asf?p=incubator-rya.git;a=commit;h=824090ac1b33c3b4ba52bfb8a67abfdc4f0ceea3
>>>>> 
>>>>> Checksums of rya-project-4.0.0-source-release.zip:
>>>>> SHA1: e5e91b19abddbdf3c9f0e18469433e730bef7957
>>>>> MD5: 1d46620a37df803c3ba0b1b383c1da10
>>>>> 
>>>>> Release artifacts are signed with the following key:
>>>>> https://people.apache.org/keys/committer/mihalik.asc
>>>>> 
>>>>> KEYS file available here:
>>>>> https://dist.apache.org/repos/dist/release/incubator/rya/KEYS
>>>>> 
>>>>> Issues that were closed/resolved for this release are here:
>>>>> 
>>>>> 
>> https://issues.apache.org/jira/secure/ReleaseNote.jspa?projectId=12319020&version=12341289
>>>>> 
>>>>> 
>>>>> The vote will be open for 72 hours and close at 11:00 AM Friday, July
>> 19,
>>>>> 2019 (EDT).
>>>>> Please download the release candidate and evaluate the necessary items
>>>>> including checking hashes, signatures, build from source, and test.
>> Then
>>>>> please vote:
>>>>> 
>>>>> [ ] +1 Release this package as rya-project-4.0.0
>>>>> [ ] +0 no opinion
>>>>> [ ] -1 Do not release this package because because...
>>>>> 
>>>> 
>>>> 
>>>> --
>>>> Dr. Adina Crainiceanu
>>>> Associate Professor
>>>> Computer Science Department
>>>> United States Naval Academy
>>>> 410-293-6822
>>>> [email protected]
>>>> http://www.usna.edu/Users/cs/adina/
>>>> 
>>> 
>> 

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