Thank you Stian, this is gold. Will try the new release as well.
It's good to have Taverna at Apache! Best, Enrico — Enrico Daga (enridaga) http://www.enridaga.net <http://www.enridaga.net/> Il budda e’ nel parco. > On 2 May 2016, at 17:19, Stian Soiland-Reyes <[email protected]> wrote: > > BTW - another alternative - if you convert to wfdesc with tavlang convert - > see > https://github.com/apache/incubator-taverna-language/tree/master/taverna-tavlang-tool > > <https://github.com/apache/incubator-taverna-language/tree/master/taverna-tavlang-tool> > > then you should also get all the annotations across the workflow - but > you will loose the information about when it was made as it comes back > as a single Triple file. > > On 28 April 2016 at 16:25, Enrico Daga (enridaga) <[email protected] > <mailto:[email protected]>> wrote: >> Hi, >> >> I am using the taverna API to explore workflows downloaded from MyExperiment. >> At the moment, I converted the files to the .wfbundle format using the >> taverna command line tools. Everything looks fine. >> Unzipping a wfbundle I can read a set of .ttl files in the annotations/ >> folder, but I am not able to do that through the Java API. >> In the simplest form, my code is as follows: >> >> WorkflowBundleIO io = new WorkflowBundleIO(); >> final WorkflowBundle wb = io.readBundle(__f(“file.wfbundle"), >> null); >> System.out.println("Annotations: " + >> wb.getAnnotations().size()); >> >> What is the recommended way to get: >> - The description of a workflow (as I can see it on the myexperiment portal) >> - All the annotations in a bundle >> - The annotations of a given WorkflowBean element >> - To access/modify/extend the annotations >> >> I am using release 0.15.0-incubating. >> >> Thank you in advance for your help, >> >> Enrico >> >> >> >> >> >> — >> Enrico Daga (enridaga) >> http://www.enridaga.net <http://www.enridaga.net/> <http://www.enridaga.net/ >> <http://www.enridaga.net/>> >> Il budda e’ nel parco. >> >> >> >> >> > > > > -- > Stian Soiland-Reyes > Apache Taverna (incubating), Apache Commons RDF (incubating) > http://orcid.org/0000-0001-9842-9718 <http://orcid.org/0000-0001-9842-9718>
