Hi Sinthuja,

On Tue, Feb 11, 2014 at 7:18 PM, Sinthuja Ragendran <[email protected]>wrote:

> Hi aruna,
>
>
>
> On Tue, Feb 11, 2014 at 6:47 PM, Aruna Karunarathna <[email protected]>wrote:
>
>> Hi all,
>>
>> I am trying to execute a hive script to extract data from BAM to MySQL
>> database. Following is the hive script I am using.
>>
>>
>> drop table BambooEmmaTable;
>>
>> drop table SummarizedBambooEmmaTable;
>>
>> CREATE EXTERNAL TABLE IF NOT EXISTS BambooEmmaTable (key STRING,
>> payload_reportID STRING ,payload_packageName STRING,
>> payload_numberOfPackages STRING , payload_numberOfClasses STRING,
>> payload_numberOfMethods STRING , payload_numberOfBlocks STRING ,
>> payload_numberOfLines    STRING,
>> payload_numberOfFiles STRING, payload_allClassCoverage STRING,
>> payload_allMethodCoverage STRING , payload_allBlockCoverage STRING,
>> payload_allLineCoverage     STRING,
>>  payload_classCoverage STRING, payload_methodCoverage STRING,
>> payload_blockCoverage STRING, payload_lineCoverage STRING) STORED BY
>> 'org.apache.hadoop.hive.cassandra.CassandraStorageHandler' WITH
>> SERDEPROPERTIES (
>> "wso2.carbon.datasource.name" = "WSO2BAM_CASSANDRA_DATASOURCE",
>> "cassandra.cf.name" = "Bamboo_Emma_Stream",
>> "cassandra.columns.mapping" = ":key,payload_reportID ,
>> payload_packageName  , payload_numberOfPackages   ,
>> payload_numberOfClasses  , payload_numberOfMethods   ,
>> payload_numberOfBlocks   , payload_numberOfLines ,
>> payload_numberOfFiles  , payload_allClassCoverage  ,
>> payload_allMethodCoverage   , payload_allBlockCoverage  ,
>> payload_allLineCoverage       ,
>> payload_classCoverage  , payload_methodCoverage  , payload_blockCoverage
>> , payload_lineCoverage" );
>>
>>
>> CREATE EXTERNAL TABLE IF NOT EXISTS
>>
>> SummarizedBambooEmmaTable( payload_reportID STRING , payload_packageName
>> STRING, payload_numberOfPackages STRING , payload_numberOfClasses STRING,
>> payload_numberOfMethods STRING , payload_numberOfBlocks STRING ,
>> payload_numberOfLines    STRING,
>> payload_numberOfFiles STRING, payload_allClassCoverage STRING,
>> payload_allMethodCoverage STRING , payload_allBlockCoverage STRING,
>> payload_allLineCoverage     STRING,
>>  payload_classCoverage STRING, payload_methodCoverage STRING,
>> payload_blockCoverage STRING, payload_lineCoverage STRING )
>>
>> STORED BY 'org.wso2.carbon.hadoop.hive.jdbc.storage.JDBCStorageHandler'
>>
>>     TBLPROPERTIES (
>>
>>                 'mapred.jdbc.driver.class' = 'com.mysql.jdbc.Driver',
>>
>>                 'mapred.jdbc.url' = 'jdbc:mysql://localhost/greg',
>>
>>                 'mapred.jdbc.username' = 'root',
>>
>>                 'mapred.jdbc.password' = '123',
>>
>>                 'hive.jdbc.update.on.duplicate'= 'true',
>>
>>                 'hive.jdbc.primary.key.fields'='payload_reportID ,
>> payload_packageName',
>>
>>                 'hive.jdbc.table.create.query' = 'CREATE TABLE
>> BambooEmmaSummary ( payload_reportID varchar(50) , payload_packageName
>> varchar(200)  ,
>>                  payload_numberOfPackages varchar(50)  ,
>> payload_numberOfClasses varchar(50) ,
>> payload_numberOfMethods varchar(50)  , payload_numberOfBlocks
>> varchar(50)  , payload_numberOfLines    varchar(50) ,
>> payload_numberOfFiles varchar(50) , payload_allClassCoverage varchar(50)
>> ,  payload_allMethodCoverage varchar(50)  , payload_allBlockCoverage
>> varchar(50) ,
>> payload_allLineCoverage     varchar(50) ,   payload_classCoverage
>> varchar(50) , payload_methodCoverage varchar(50) , payload_blockCoverage
>> varchar(50) ,
>> payload_lineCoverage varchar(50), PRIMARY KEY(payload_reportID,
>> payload_packageName ) )');
>>
>>
>> insert overwrite table SummarizedBambooEmmaTable SELECT
>> payload_reportID   ,  payload_packageName , payload_numberOfPackages   ,
>> payload_numberOfClasses  , payload_numberOfMethods   ,
>> payload_numberOfBlocks
>> , payload_numberOfLines , payload_numberOfFiles  ,
>> payload_allClassCoverage  ,  payload_allMethodCoverage   ,
>> payload_allBlockCoverage  , payload_allLineCoverage      ,
>> payload_classCoverage  , payload_methodCoverage  , payload_blockCoverage
>> , payload_lineCoverage  FROM BambooEmmaTable
>>
>>
>>
>>  How ever I am getting the following exception When I ran the hive script.
>>
>> [2014-02-11 18:37:33,279] ERROR
>> {org.wso2.carbon.hadoop.hive.jdbc.storage.db.DBOperation} -  Failed to
>> write data to database
>> java.sql.SQLException: No value specified for parameter 2
>>     at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:1086)
>>     at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:989)
>>     at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:975)
>>     at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:920)
>>     at
>> com.mysql.jdbc.PreparedStatement.checkAllParametersSet(PreparedStatement.java:2594)
>>     at
>> com.mysql.jdbc.PreparedStatement.fillSendPacket(PreparedStatement.java:2569)
>>     at
>> com.mysql.jdbc.PreparedStatement.fillSendPacket(PreparedStatement.java:2493)
>>     at
>> com.mysql.jdbc.PreparedStatement.executeQuery(PreparedStatement.java:2260)
>>     at
>> org.wso2.carbon.hadoop.hive.jdbc.storage.db.DBOperation.isRowExisting(DBOperation.java:149)
>>     at
>> org.wso2.carbon.hadoop.hive.jdbc.storage.db.DBOperation.writeToDB(DBOperation.java:59)
>>     at
>> org.wso2.carbon.hadoop.hive.jdbc.storage.db.DBRecordWriter.write(DBRecordWriter.java:35)
>>     at
>> org.apache.hadoop.hive.ql.exec.FileSinkOperator.processOp(FileSinkOperator.java:589)
>>     at org.apache.hadoop.hive.ql.exec.Operator.process(Operator.java:471)
>>     at org.apache.hadoop.hive.ql.exec.Operator.forward(Operator.java:762)
>>     at
>> org.apache.hadoop.hive.ql.exec.SelectOperator.processOp(SelectOperator.java:84)
>>     at org.apache.hadoop.hive.ql.exec.Operator.process(Operator.java:471)
>>     at org.apache.hadoop.hive.ql.exec.Operator.forward(Operator.java:762)
>>     at
>> org.apache.hadoop.hive.ql.exec.TableScanOperator.processOp(TableScanOperator.java:83)
>>     at org.apache.hadoop.hive.ql.exec.Operator.process(Operator.java:471)
>>     at org.apache.hadoop.hive.ql.exec.Operator.forward(Operator.java:762)
>>     at
>> org.apache.hadoop.hive.ql.exec.MapOperator.process(MapOperator.java:531)
>>     at org.apache.hadoop.hive.ql.exec.ExecMapper.map(ExecMapper.java:143)
>>     at org.apache.hadoop.mapred.MapRunner.run(MapRunner.java:50)
>>     at org.apache.hadoop.mapred.MapTask.runOldMapper(MapTask.java:435)
>>     at org.apache.hadoop.mapred.MapTask.run(MapTask.java:371)
>>     at
>> org.apache.hadoop.mapred.LocalJobRunner$Job.run(LocalJobRunner.java:211)
>>
>>
>> However, If I change the * 'hive.jdbc.primary.key.fields'='**payload_reportID
>> , payload_packageName',  *to a single key value, script seems to work
>> fine.
>>
>
> Remove the space between the primary key fields and try again. Ie, *
> 'hive.jdbc.primary.key.fields'='**payload_reportID,payload_packageName'.*
>

I think we need to fix this(or add it to the docs). Otherwise someone else
will complain about the same thing again. Current docs are also having
spaces between the fields. WDYT?


> Note you need to drop the Hive JDBC table - SummarizedBambooEmmaTable as
> above, for the changes to get reflected during the execution.
>
> Thanks,
> Sinthuja.
>
>>
>> Any ideas what I'm doing wrong here?.. Any help suggestion is highly
>> appreciated.
>>
>>
>>
>> Regards,
>> --
>>
>> * Aruna Sujith Karunarathna* | Software Engineer
>> WSO2, Inc | lean. enterprise. middleware.
>> #20, Palm Grove, Colombo 03, Sri Lanka
>> Mobile: +94 71 9040362 | Work: +94 112145345
>> Email: [email protected] | Web: www.wso2.com
>>
>>
>> _______________________________________________
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>>
>>
>
>
> --
> *Sinthuja Rajendran*
> Software Engineer <http://wso2.com/>
> WSO2, Inc.:http://wso2.com
>
> Blog: http://sinthu-rajan.blogspot.com/
> Mobile: +94774273955
>
>
>
> _______________________________________________
> Dev mailing list
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> http://wso2.org/cgi-bin/mailman/listinfo/dev
>
>


-- 
Regards,

Inosh Goonewardena
Associate Technical Lead- WSO2 Inc.
Mobile: +94779966317
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