David Laxer created ZEPPELIN-814:
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Summary: Error running GraphX method: GraphLoader.edgeListFile()
Key: ZEPPELIN-814
URL: https://issues.apache.org/jira/browse/ZEPPELIN-814
Project: Zeppelin
Issue Type: Bug
Components: zeppelin-interpreter
Affects Versions: 0.5.6, 0.6.0
Environment: $ mvn --version
Apache Maven 3.3.9 (bb52d8502b132ec0a5a3f4c09453c07478323dc5;
2015-11-10T08:41:47-08:00)
Maven home: /opt/local/share/java/maven3
Java version: 1.8.0_05, vendor: Oracle Corporation
Java home: /Library/Java/JavaVirtualMachines/jdk1.8.0_05.jdk/Contents/Home/jre
Default locale: en_US, platform encoding: UTF-8
OS name: "mac os x", version: "10.11.4", arch: "x86_64", family: "mac"
Reporter: David Laxer
The problem happens with Source 0.5.6 and 0.6 as well as with 0.5.6 binary.
import org.apache.spark.graphx._
val graph = GraphLoader.edgeListFile(sc, "cit-HepTh.txt")
com.fasterxml.jackson.databind.JsonMappingException: Could not find creator
property with name 'id' (in class org.apache.spark.rdd.RDDOperationScope)
at [Source: {"id":"2","name":"textFile"}; line: 1, column: 1]
at
com.fasterxml.jackson.databind.JsonMappingException.from(JsonMappingException.java:148)
at
com.fasterxml.jackson.databind.DeserializationContext.mappingException(DeserializationContext.java:843)
at
com.fasterxml.jackson.databind.deser.BeanDeserializerFactory.addBeanProps(BeanDeserializerFactory.java:533)
at
com.fasterxml.jackson.databind.deser.BeanDeserializerFactory.buildBeanDeserializer(BeanDeserializerFactory.java:220)
at
com.fasterxml.jackson.databind.deser.BeanDeserializerFactory.createBeanDeserializer(BeanDeserializerFactory.java:143)
at
com.fasterxml.jackson.databind.deser.DeserializerCache._createDeserializer2(DeserializerCache.java:409)
at
com.fasterxml.jackson.databind.deser.DeserializerCache._createDeserializer(DeserializerCache.java:358)
at
com.fasterxml.jackson.databind.deser.DeserializerCache._createAndCache2(DeserializerCache.java:265)
at
com.fasterxml.jackson.databind.deser.DeserializerCache._createAndCacheValueDeserializer(DeserializerCache.java:245)
at
com.fasterxml.jackson.databind.deser.DeserializerCache.findValueDeserializer(DeserializerCache.java:143)
at
com.fasterxml.jackson.databind.DeserializationContext.findRootValueDeserializer(DeserializationContext.java:439)
at
com.fasterxml.jackson.databind.ObjectMapper._findRootDeserializer(ObjectMapper.java:3666)
at
com.fasterxml.jackson.databind.ObjectMapper._readMapAndClose(ObjectMapper.java:3558)
at
com.fasterxml.jackson.databind.ObjectMapper.readValue(ObjectMapper.java:2578)
at
org.apache.spark.rdd.RDDOperationScope$.fromJson(RDDOperationScope.scala:85)
at
org.apache.spark.rdd.RDDOperationScope$$anonfun$5.apply(RDDOperationScope.scala:136)
at
org.apache.spark.rdd.RDDOperationScope$$anonfun$5.apply(RDDOperationScope.scala:136)
at scala.Option.map(Option.scala:145)
at
org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:136)
at
org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:111)
at org.apache.spark.SparkContext.withScope(SparkContext.scala:714)
at org.apache.spark.SparkContext.hadoopFile(SparkContext.scala:1011)
at
org.apache.spark.SparkContext$$anonfun$textFile$1.apply(SparkContext.scala:832)
at
org.apache.spark.SparkContext$$anonfun$textFile$1.apply(SparkContext.scala:830)
at
org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:150)
at
org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:111)
at org.apache.spark.SparkContext.withScope(SparkContext.scala:714)
at org.apache.spark.SparkContext.textFile(SparkContext.scala:830)
at
org.apache.spark.graphx.GraphLoader$.edgeListFile(GraphLoader.scala:72)
at
$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:32)
at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:37)
at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:39)
at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:41)
at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:43)
at $iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:45)
at $iwC$$iwC$$iwC$$iwC.<init>(<console>:47)
at $iwC$$iwC$$iwC.<init>(<console>:49)
at $iwC$$iwC.<init>(<console>:51)
at $iwC.<init>(<console>:53)
at <init>(<console>:55)
at .<init>(<console>:59)
at .<clinit>(<console>)
at .<init>(<console>:7)
at .<clinit>(<console>)
at $print(<console>)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:483)
at
org.apache.spark.repl.SparkIMain$ReadEvalPrint.call(SparkIMain.scala:1065)
at
org.apache.spark.repl.SparkIMain$Request.loadAndRun(SparkIMain.scala:1346)
at
org.apache.spark.repl.SparkIMain.loadAndRunReq$1(SparkIMain.scala:840)
at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:871)
at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:819)
at
org.apache.zeppelin.spark.SparkInterpreter.interpretInput(SparkInterpreter.java:709)
at
org.apache.zeppelin.spark.SparkInterpreter.interpret(SparkInterpreter.java:674)
at
org.apache.zeppelin.spark.SparkInterpreter.interpret(SparkInterpreter.java:667)
at
org.apache.zeppelin.interpreter.ClassloaderInterpreter.interpret(ClassloaderInterpreter.java:57)
at
org.apache.zeppelin.interpreter.LazyOpenInterpreter.interpret(LazyOpenInterpreter.java:93)
at
org.apache.zeppelin.interpreter.remote.RemoteInterpreterServer$InterpretJob.jobRun(RemoteInterpreterServer.java:300)
at org.apache.zeppelin.scheduler.Job.run(Job.java:169)
at
org.apache.zeppelin.scheduler.FIFOScheduler$1.run(FIFOScheduler.java:134)
at
java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at
java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$201(ScheduledThreadPoolExecutor.java:180)
at
java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:293)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)
ERROR
Took 1 seconds
READY
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