Re: [OMPI devel] OpenMPI rpm build 1.3rc3r20226 build failed

Jeff Squyres Sun, 11 Jan 2009 07:40:45 -0500

This sounds like a distro/compiler version issue.

Can you narrow down the issue at all?



On Jan 11, 2009, at 3:23 AM, Lenny Verkhovsky wrote:

it doesnt happen if I do autogen, configure and make install,
only when I try to make an rpm from the tar file.

On Thu, Jan 8, 2009 at 9:43 PM, Jeff Squyres <jsquy...@cisco.com>wrote:

This doesn't happen in a normal build of the same tree?

I ask because both 1.3r20226 builds fine for me manually (i.e.,
./configure;make and buildrpm.sh).


On Jan 8, 2009, at 8:15 AM, Lenny Verkhovsky wrote:

Hi,

I am trying to build rpm from nightly snaposhots of 1.3

with the downloaded buildrpm.sh and ompi.spec file from
http://svn.open-mpi.org/svn/ompi/branches/v1.3/contrib/dist/linux/

I am getting this error
.....................
Making all in vtlib
make[5]: Entering directory

`/hpc/home/USERS/lennyb/work/svn/release/scripts/dist-1.3--1/OMPI/BUILD/

openmpi-1.3rc3r20226/ompi/contrib/vt/vt/vtlib'
gcc  -DHAVE_CONFIG_H -I. -I.. -I../tools/opari/lib
-I../extlib/otf/otflib -I../extlib/otf/otflib     -D_GNU_SOURCE
-DBINDIR=\"/opt/openmpi/1.3rc3r20226-V00/gcc/bin\"
-DDATADIR=\"/opt/openmpi/1.3rc3r20226-V00/gcc/share\" -DRFG
-DVT_MEMHOOK -DVT_IOWRAP  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64

-mtune=generic -MT vt_comp_gnu.o -MD -MP -MF .deps/vt_comp_gnu.Tpo-c -o

vt_comp_gnu.o vt_comp_gnu.c
gcc  -DHAVE_CONFIG_H -I. -I.. -I../tools/opari/lib
-I../extlib/otf/otflib -I../extlib/otf/otflib     -D_GNU_SOURCE
-DBINDIR=\"/opt/openmpi/1.3rc3r20226-V00/gcc/bin\"
-DDATADIR=\"/opt/openmpi/1.3rc3r20226-V00/gcc/share\" -DRFG
-DVT_MEMHOOK -DVT_IOWRAP  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64

-mtune=generic -MT vt_memhook.o -MD -MP -MF .deps/vt_memhook.Tpo -c -o

vt_memhook.o vt_memhook.c
gcc  -DHAVE_CONFIG_H -I. -I.. -I../tools/opari/lib
-I../extlib/otf/otflib -I../extlib/otf/otflib     -D_GNU_SOURCE
-DBINDIR=\"/opt/openmpi/1.3rc3r20226-V00/gcc/bin\"
-DDATADIR=\"/opt/openmpi/1.3rc3r20226-V00/gcc/share\" -DRFG
-DVT_MEMHOOK -DVT_IOWRAP  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64
-mtune=generic -MT vt_memreg.o -MD -MP -MF .deps/vt_memreg.Tpo -c -o
vt_memreg.o vt_memreg.c
gcc  -DHAVE_CONFIG_H -I. -I.. -I../tools/opari/lib
-I../extlib/otf/otflib -I../extlib/otf/otflib     -D_GNU_SOURCE
-DBINDIR=\"/opt/openmpi/1.3rc3r20226-V00/gcc/bin\"
-DDATADIR=\"/opt/openmpi/1.3rc3r20226-V00/gcc/share\" -DRFG
-DVT_MEMHOOK -DVT_IOWRAP  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64
-mtune=generic -MT vt_iowrap.o -MD -MP -MF .deps/vt_iowrap.Tpo -c -o
vt_iowrap.o vt_iowrap.c
mv -f .deps/vt_memreg.Tpo .deps/vt_memreg.Po
gcc  -DHAVE_CONFIG_H -I. -I.. -I../tools/opari/lib
-I../extlib/otf/otflib -I../extlib/otf/otflib     -D_GNU_SOURCE
-DBINDIR=\"/opt/openmpi/1.3rc3r20226-V00/gcc/bin\"
-DDATADIR=\"/opt/openmpi/1.3rc3r20226-V00/gcc/share\" -DRFG
-DVT_MEMHOOK -DVT_IOWRAP  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64
-mtune=generic -MT vt_iowrap_helper.o -MD -MP -MF

.deps/vt_iowrap_helper.Tpo -c -o vt_iowrap_helper.ovt_iowrap_helper.c

mv -f .deps/vt_memhook.Tpo .deps/vt_memhook.Po
gcc  -DHAVE_CONFIG_H -I. -I.. -I../tools/opari/lib
-I../extlib/otf/otflib -I../extlib/otf/otflib     -D_GNU_SOURCE
-DBINDIR=\"/opt/openmpi/1.3rc3r20226-V00/gcc/bin\"
-DDATADIR=\"/opt/openmpi/1.3rc3r20226-V00/gcc/share\" -DRFG
-DVT_MEMHOOK -DVT_IOWRAP  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64

-mtune=generic -MT rfg_regions.o -MD -MP -MF .deps/rfg_regions.Tpo-c -o

rfg_regions.o rfg_regions.c

vt_iowrap.c:1242: error: expected declaration specifiers or '...'before

numeric constant
vt_iowrap.c:1243: error: conflicting types for '__fprintf_chk'
mv -f .deps/vt_comp_gnu.Tpo .deps/vt_comp_gnu.Po
make[5]: *** [vt_iowrap.o] Error 1
make[5]: *** Waiting for unfinished jobs....
mv -f .deps/vt_iowrap_helper.Tpo .deps/vt_iowrap_helper.Po
mv -f .deps/rfg_regions.Tpo .deps/rfg_regions.Po
make[5]: Leaving directory

`/hpc/home/USERS/lennyb/work/svn/release/scripts/dist-1.3--1/OMPI/BUILD/

openmpi-1.3rc3r20226/ompi/contrib/vt/vt/vtlib'
make[4]: *** [all-recursive] Error 1
make[4]: Leaving directory

`/hpc/home/USERS/lennyb/work/svn/release/scripts/dist-1.3--1/OMPI/BUILD/

openmpi-1.3rc3r20226/ompi/contrib/vt/vt'
make[3]: *** [all] Error 2
make[3]: Leaving directory

`/hpc/home/USERS/lennyb/work/svn/release/scripts/dist-1.3--1/OMPI/BUILD/

openmpi-1.3rc3r20226/ompi/contrib/vt/vt'
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory

`/hpc/home/USERS/lennyb/work/svn/release/scripts/dist-1.3--1/OMPI/BUILD/

openmpi-1.3rc3r20226/ompi/contrib/vt'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory

`/hpc/home/USERS/lennyb/work/svn/release/scripts/dist-1.3--1/OMPI/BUILD/

openmpi-1.3rc3r20226/ompi'
make: *** [all-recursive] Error 1
error: Bad exit status from /var/tmp/rpm-tmp.32080 (%build)


RPM build errors:
 Bad exit status from /var/tmp/rpm-tmp.32080 (%build)



RPM build errors:
 Bad exit status from /var/tmp/rpm-tmp.32080 (%build)


full error.log attached


thanks,
Lenny.
<ompi.ompi_build.31401.log><mime-attachment.txt>



--
Jeff Squyres
Cisco Systems

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Jeff Squyres
Cisco Systems

Re: [OMPI devel] OpenMPI rpm build 1.3rc3r20226 build failed

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