Unfortunately, I have no write access to the OFED bugzilla, so I answer to the OMPI devel list...
It sounds like the following issue that we had early January: http://www.open-mpi.org/community/lists/devel/2009/01/5102.php The bottom line was that we don't know what's wrong. However, there are these workarounds to solve this problem: - setting 'use_default_rpm_opt_flags' to 0 - adding configure option '--with-contrib-vt-flags=--disable-iotrace' Matthias On Thu, 2009-03-05 at 16:43 +0200, Pavel Shamis (Pasha) wrote: > Adding pointer to OFED bugzilla ticket for more information: > https://bugs.openfabrics.org/show_bug.cgi?id=1537 > > Jeff Squyres wrote: > > VT guys -- > > > > It looks like we still have a compile bug in OMPI 1.3.1rc4... See below. > > > > Do you think you can get a fix ASAP for OMPI 1.3.1final? > > > > > > Begin forwarded message: > > > >> *From: *"PN" <pok...@gmail.com <mailto:pok...@gmail.com>> > >> *Date: *March 5, 2009 12:51:28 AM EST > >> *To: *"Tziporet Koren" <tzipo...@mellanox.co.il > >> <mailto:tzipo...@mellanox.co.il>> > >> *Cc: *<e...@lists.openfabrics.org <mailto:e...@lists.openfabrics.org>>, > >> <gene...@lists.openfabrics.org <mailto:gene...@lists.openfabrics.org>> > >> *Subject:** Re: [ofa-general] OFED 1.4.1 is available* > >> > >> HI, > >> > >> I have a build error of OFED-1.4.1-rc1 under CentOS 5.2: > >> > >> ..... > >> Build openmpi_gcc RPM > >> Running rpmbuild --rebuild --define '_topdir /var/tmp/OFED_topdir' > >> --define 'dist %{nil}' --target x86_64 --define '_name openmpi_gcc' > >> --define 'mpi_selector /usr/bin/mpi-selector' --define > >> 'use_mpi_selector 1' --define 'install_shell_scripts 1' --define > >> 'shell_scripts_basename mpivars' --define '_usr /usr' --define 'ofed > >> 0' --define '_prefix /usr/mpi/gcc/openmpi-1.3.1rc4' --define > >> '_defaultdocdir /usr/mpi/gcc/openmpi-1.3.1rc4' --define '_mandir > >> %{_prefix}/share/man' --define 'mflags -j 4' --define > >> 'configure_options --with-openib=/usr > >> --with-openib-libdir=/usr/lib64 CC=gcc CXX=g++ F77=gfortran > >> FC=gfortran --enable-mpirun-prefix-by-default' --define > >> 'use_default_rpm_opt_flags 1' > >> /opt/software/packages/ofed/OFED-1.4.1-rc1/OFED-1.4.1-rc1/SRPMS/openmpi-1.3.1rc4-1.src.rpm > >> Failed to build openmpi RPM > >> See /tmp/OFED.28377.logs/openmpi.rpmbuild.log > >> > >> > >> In /tmp/OFED.28377.logs/openmpi.rpmbuild.log: > >> ..... > >> gcc -DHAVE_CONFIG_H -I. -I.. -I../tools/opari/lib > >> -I../extlib/otf/otflib -I../extlib/otf/otflib -D_GNU_SOURCE > >> -DBINDIR=\"/usr/mpi/gcc/openmpi-1.3.1rc4/bin\" > >> -DDATADIR=\"/usr/mpi/gcc/openmpi-1.3.1rc4/share\" -DRFG -DVT_MEMHOOK > >> -DVT_IOWRAP -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions > >> -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -MT > >> vt_iowrap_helper.o -MD -MP -MF .deps/vt_iowrap_helper.Tpo -c -o > >> vt_iowrap_helper.o vt_iowrap_helper.c > >> mv -f .deps/vt_memhook.Tpo .deps/vt_memhook.Po > >> gcc -DHAVE_CONFIG_H -I. -I.. -I../tools/opari/lib > >> -I../extlib/otf/otflib -I../extlib/otf/otflib -D_GNU_SOURCE > >> -DBINDIR=\"/usr/mpi/gcc/openmpi-1.3.1rc4/bin\" > >> -DDATADIR=\"/usr/mpi/gcc/openmpi-1.3.1rc4/share\" -DRFG -DVT_MEMHOOK > >> -DVT_IOWRAP -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions > >> -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -MT > >> rfg_regions.o -MD -MP -MF .deps/rfg_regions.Tpo -c -o rfg_regions.o > >> rfg_regions.c > >> vt_iowrap.c:1242: error: expected declaration specifiers or '...' > >> before numeric constant > >> vt_iowrap.c:1243: error: conflicting types for '__fprintf_chk' > >> mv -f .deps/vt_iowrap_helper.Tpo .deps/vt_iowrap_helper.Po > >> make[5]: *** [vt_iowrap.o] Error 1 > >> make[5]: *** Waiting for unfinished jobs.... > >> mv -f .deps/vt_comp_gnu.Tpo .deps/vt_comp_gnu.Po > >> mv -f .deps/rfg_regions.Tpo .deps/rfg_regions.Po > >> make[5]: Leaving directory > >> `/var/tmp/OFED_topdir/BUILD/openmpi-1.3.1rc4/ompi/contrib/vt/vt/vtlib' > >> make[4]: *** [all-recursive] Error 1 > >> make[4]: Leaving directory > >> `/var/tmp/OFED_topdir/BUILD/openmpi-1.3.1rc4/ompi/contrib/vt/vt' > >> make[3]: *** [all] Error 2 > >> make[3]: Leaving directory > >> `/var/tmp/OFED_topdir/BUILD/openmpi-1.3.1rc4/ompi/contrib/vt/vt' > >> make[2]: *** [all-recursive] Error 1 > >> make[2]: Leaving directory > >> `/var/tmp/OFED_topdir/BUILD/openmpi-1.3.1rc4/ompi/contrib/vt' > >> make[1]: *** [all-recursive] Error 1 > >> make[1]: Leaving directory > >> `/var/tmp/OFED_topdir/BUILD/openmpi-1.3.1rc4/ompi' > >> make: *** [all-recursive] Error 1 > >> error: Bad exit status from /var/tmp/rpm-tmp.40739 (%build) > >> > >> > >> RPM build errors: > >> user jsquyres does not exist - using root > >> group eng10 does not exist - using root > >> user jsquyres does not exist - using root > >> group eng10 does not exist - using root > >> Bad exit status from /var/tmp/rpm-tmp.40739 (%build) > >> > >> > >> The error seems similar to > >> http://www.open-mpi.org/community/lists/devel/2009/01/5230.php > >> > >> Regards, > >> PN > >> > >> > >> 2009/3/5 Tziporet Koren <tzipo...@mellanox.co.il > >> <mailto:tzipo...@mellanox.co.il>> > >> > >> Hi, > >> > >> OFED-1.4.1-rc1 release is available on > >> > >> > >> _http://www.openfabrics.org/downloads/OFED/ofed-1.4.1/OFED-1.4.1-rc1.tgz_ > >> > >> > >> To get BUILD_ID run ofed_info > >> > >> Please report any issues in bugzilla > >> _https://bugs.openfabrics.org/_ for OFED 1.4.1 > >> > >> Vladimir & Tziporet > >> > >> > >> ======================================================================== > >> > >> > >> Release information: > >> > >> ------------------------------ > >> > >> Linux Operating Systems: > >> > >> - RedHat EL4 up4: 2.6.9-42.ELsmp * > >> > >> - RedHat EL4 up5: 2.6.9-55.ELsmp > >> > >> - RedHat EL4 up6: 2.6.9-67.ELsmp > >> > >> - RedHat EL4 up7: 2.6.9-78.ELsmp > >> > >> - RedHat EL5: 2.6.18-8.el5 > >> > >> - RedHat EL5 up1: 2.6.18-53.el5 > >> > >> - RedHat EL5 up2: 2.6.18-92.el5 > >> > >> - RedHat EL5 up3: 2.6.18-128.el5 > >> > >> - OEL 4.5: 2.6.9-55.ELsmp > >> > >> - OEL 5.2: 2.6.18-92.el5 > >> > >> - CentOS 5.2: 2.6.18-92.el5 > >> > >> - Fedora C9: 2.6.25-14.fc9 * > >> > >> - SLES10: 2.6.16.21-0.8-smp > >> > >> - SLES10 SP1: 2.6.16.46-0.12-smp > >> > >> - SLES10 SP1 up1: 2.6.16.53-0.16-smp > >> > >> - SLES10 SP2: 2.6.16.60-0.21-smp > >> > >> - SLES11 RC3: 2.6.27.13-1-default > >> > >> - OpenSuSE 10.3: 2.6.22.5-31 * > >> > >> - kernel.org <http://kernel.org>: 2.6.26 and > >> 2.6.27 > >> > >> * Minimal QA for these versions > >> > >> Systems: > >> > >> * x86_64 > >> > >> * x86 > >> > >> * ia64 > >> > >> * ppc64 > >> > >> > >> Main Changes from OFED-1.4 > >> > >> ====================== > >> > >> - Added support for RHEL 5.3 and SLES11 RC3 > >> > >> - Added RHEL 5.2 backports for NFS/RDMA > >> > >> - Updated MPI packages: > >> > >> mvapich-1.1.0-3143 > >> > >> Open MPI 1.3.1-rc4 > >> > >> - Updated bonding package: ib-bonding-0.9.0-38 > >> > >> - Updated opensm version to include critical bug fixes > >> > >> - Fixed RDS iWARP support > >> > >> - Low level drivers updated: ehca, mlx4, cxgb3, nes > >> > >> - Bug fixes > >> > >> - Attached kernel git tree changes for details > >> > >> <<ofa_kernel-1.4_1.4.1-rc1.log>> > >> > >> Tasks that should be completed for RC2: > >> > >> ============================= > >> > >> 1. High priority bug fixes > >> > >> 2. RHEL 5.2 32 bits compilation issue (due to NFS/RDMA backports) > >> > >> 3. Open MPI 1.3.1 release > >> > >> 4. MVAPICH 1.1.1.minor release with critical bug fixes > >> > >> 5. OSM release 3.2.6 > >> > >> 6. Documentation update > >> > >> > >> _______________________________________________ > >> general mailing list > >> gene...@lists.openfabrics.org <mailto:gene...@lists.openfabrics.org> > >> http://lists.openfabrics.org/cgi-bin/mailman/listinfo/general > >> > >> To unsubscribe, please visit > >> http://openib.org/mailman/listinfo/openib-general > >> > >> > >> _______________________________________________ > >> general mailing list > >> gene...@lists.openfabrics.org <mailto:gene...@lists.openfabrics.org> > >> http://lists.openfabrics.org/cgi-bin/mailman/listinfo/general > >> > >> To unsubscribe, please visit > >> http://openib.org/mailman/listinfo/openib-general > > > > > > -- > > Jeff Squyres > > Cisco Systems > > > > ------------------------------------------------------------------------ > > > > _______________________________________________ > > devel mailing list > > de...@open-mpi.org > > http://www.open-mpi.org/mailman/listinfo.cgi/devel > > _______________________________________________ > devel mailing list > de...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/devel >
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