Dear OpenMPI developer, we have some troubles when using OpenMPI and CMake on codes using 'SHMEM'.
Cf. 'man shmem_swap', > Fortran: > INCLUDE "mpp/shmem.fh" Yes here is one such header file: > openmpi-1.X.Y/oshmem/include/mpp/shmem.fh ... since version 1.7. at least. The significnat content is this line: > include 'shmem.fh'whereby OpenMPI mean to include not the same file by itself (= infinite loop!) but I believe these one file:
> openmpi-1.X.Y/oshmem/include/shmem.fh(The above paths are in the source code distributions; in the installation the files are located here: include/shmem.fh include/mpp/shmem.fh)
This works. Unless you start using CMake. Because CMake is 'intelligent' and try to add the search paths recursively, (I believe,) gloriously enabling the infinite loop by including the 'shmem.fh' file from the 'shmem.fh' file.
Steps to repriduce: $ mkdir build; cd build; cmake .. $ makeThe second one command need some minute(s), sticking by the 'Scanning dependencies of target mpihelloworld' step.
If connecting by 'strace -p <PID>' to the 'cmake' process you will see lines like below, again and again. So I think CMake just include the 'shmem.fh' file from itself unless the stack is full / a limit is reached / the moon shines, and thus hangs for a while (seconds/minutes) in the 'Scanning dependencies...' state.
*Well, maybe having a file including the same file is not that good?*If the file 'include/mpp/shmem.fh' would include not 'shmem.fh' but 'somethingelse.fh' located in 'include/...' these infinite loop would be impossible at all...
And by the way: is here a way to limit the maximum include depths in CMake for header files? This would workaround this one 'infinite include loop' issue...
Have a nice day, Paul Kapinos ..............access("/opt/MPI/openmpi-1.10.2/linux/intel_16.0.2.181/include/mpp/shmem.fh", R_OK) = 0 stat("/opt/MPI/openmpi-1.10.2/linux/intel_16.0.2.181/include/mpp/shmem.fh", {st_mode=S_IFREG|0644, st_size=205, ...}) = 0 open("/opt/MPI/openmpi-1.10.2/linux/intel_16.0.2.181/include/mpp/shmem.fh", O_RDONLY) = 5271
fstat(5271, {st_mode=S_IFREG|0644, st_size=205, ...}) = 0mmap(NULL, 32768, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) = 0x7f08457d2000
read(5271, "!\n! Copyright (c) 2013 Me"..., 32768) = 205 read(5271, "", 32768) = 0access("/opt/MPI/openmpi-1.10.2/linux/intel_16.0.2.181/include/mpp/shmem.fh", R_OK) = 0 stat("/opt/MPI/openmpi-1.10.2/linux/intel_16.0.2.181/include/mpp/shmem.fh", {st_mode=S_IFREG|0644, st_size=205, ...}) = 0 open("/opt/MPI/openmpi-1.10.2/linux/intel_16.0.2.181/include/mpp/shmem.fh", O_RDONLY) = 5272
fstat(5272, {st_mode=S_IFREG|0644, st_size=205, ...}) = 0mmap(NULL, 32768, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) = 0x7f08457ca000
read(5272, "!\n! Copyright (c) 2013 Me"..., 32768) = 205 read(5272, "", 32768) = 0 .............. -- Dipl.-Inform. Paul Kapinos - High Performance Computing, RWTH Aachen University, IT Center Seffenter Weg 23, D 52074 Aachen (Germany) Tel: +49 241/80-24915
cmake_minimum_required(VERSION 2.8) project(mpihelloworld) enable_language(Fortran) find_package(MPI REQUIRED) #include_directories(${MPI_INCLUDE_PATH}) include_directories(${MPI_Fortran_INCLUDE_PATH}) add_executable(mpihelloworld mpihelloworld.F90) #link_directories(${MPI_LIBRARIES}) #target_link_libraries(mpihelloworld ${MPI_LIBRARIES}) link_directories(${MPI_Fortran_LIBRARIES}) target_link_libraries(mpihelloworld ${MPI_Fortran_LIBRARIES})
! Paul Kapinos 22.09.2009 - ! RZ RWTH Aachen, www.rz.rwth-aachen.de ! ! MPI-Hello-World ! PROGRAM PK_MPI_Test ! USE MPI IMPLICIT NONE include "mpif.h" #if defined(SHMEM) INCLUDE "mpp/shmem.fh" #endif ! INTEGER :: my_MPI_Rank, laenge, ierr CHARACTER*(MPI_MAX_PROCESSOR_NAME) my_Host CALL MPI_INIT (ierr) CALL MPI_COMM_RANK( MPI_COMM_WORLD, my_MPI_Rank, ierr ) CALL MPI_GET_PROCESSOR_NAME(my_Host, laenge, ierr) WRITE (*,*) "Prozessor ", my_MPI_Rank, "on Host: ", my_Host(1:laenge) CALL Sleep(1) CALL MPI_FINALIZE(ierr) CONTAINS SUBROUTINE foo1 #if defined(SHMEM) INCLUDE "mpp/shmem.fh" #endif END SUBROUTINE foo1 SUBROUTINE foo2 #if defined(SHMEM) INCLUDE "mpp/shmem.fh" #endif END SUBROUTINE foo2 SUBROUTINE foo3 #if defined(SHMEM) INCLUDE "mpp/shmem.fh" #endif END SUBROUTINE foo3 SUBROUTINE foo4 #if defined(SHMEM) INCLUDE "mpp/shmem.fh" #endif END SUBROUTINE foo4 SUBROUTINE foo5 #if defined(SHMEM) INCLUDE "mpp/shmem.fh" #endif END SUBROUTINE foo5 END PROGRAM PK_MPI_Test
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