The "bi_1", "bi_2" etc tables missing are meant to be used with legacy
DB-based browse. They don't exist because DSpace 5 doesn't create them
anymore.

> 2016-02-22 21:01:28,816 INFO  org.dspace.search.DSIndexer @ Writing 
> Community: 123456789/99 to Index

>From these log lines, I see that index-init (Lucene-based search)
completed successfully. The question is whether you changed your
configuration to use the legacy Lucene search and DB-based browse or
you did no changes and are using the Discovery (Solr) based
search&browse.

If you click on any Browse index (by author, by title, by issue date),
do you see any items?
Which URL did you use for search?

If you make a search query from the /discovery URL, do you see results?

To debug the problem with an item page not showing any content, watch
the log file:
tail -f [dspace]/log/dspace.log.2016-xx-xx

and then load any item page. Do you see any message added to the log?


Regards,
~~helix84

Compulsory reading: DSpace Mailing List Etiquette
https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette

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