Yeah Alan, you are right, so please Margaret send the localhost log....but
you can:

1- With the comand "ps -ef | more" check if there is any tomcat instance
running and use kill -9 to kill it.
2- Use "df -kha"to check if you have space in disc.

Otherwise, send the file log file.

Best regards
Luiz Claudio Santos
http://luizclaudiosantos.me/



On Fri, Sep 23, 2016 at 2:42 PM, Alan Orth <alan.o...@gmail.com> wrote:

> The Tomcat Native libraries are not required, that's not a fatal error.
> The SEVERE errors in that log are not helpful, you should look in localhost
> log.
>
> On Fri, Sep 23, 2016, 21:19 Luiz dos Santos <luiz...@gmail.com> wrote:
>
>> It didn't find the tomcat native libraries, some points:
>>
>> 1- If you are using DSpace as service, be sure that you didn't start the
>> service with a user that should not do it.
>> 2- if you are run startup.sh, be sure that you are using a user that can
>> access : /usr/java/packages/lib/amd64:/usr/lib64:/lib64:/lib:/usr/lib
>>
>> If I was you, I would prefer run a stand alone tomcat, instead the one
>> that came in you operation system.
>>
>> Best regards
>> Luiz Claudio Santos
>> http://luizclaudiosantos.me/
>>
>>
>> On Fri, Sep 23, 2016 at 2:05 PM, Alan Orth <alan.o...@gmail.com> wrote:
>>
>>> Not good. Try looking in the localhost log file, also in the
>>> /var/log/tomcat folder.
>>>
>>> On Mon, Sep 19, 2016, 16:40 <marga...@dal.ca> wrote:
>>>
>>>> Hi,
>>>>
>>>>
>>>> I went to restart our DSpace Production server this morning and tomcat
>>>> will not come back up. Below is the output when tomcat is attempting to
>>>> start from catalina.out. Any advice would be appreciated!
>>>>
>>>>
>>>>
>>>>
>>>> Sep 19, 2016 10:08:23 AM org.apache.catalina.core.AprLifecycleListener
>>>> init
>>>>
>>>> INFO: The APR based Apache Tomcat Native library which allows optimal
>>>> performance in production environments was not found on the
>>>> java.library.path: /usr/java/packages/lib/amd64:/
>>>> usr/lib64:/lib64:/lib:/usr/lib
>>>>
>>>> Sep 19, 2016 10:08:23 AM org.apache.coyote.AbstractProtocol init
>>>>
>>>> INFO: Initializing ProtocolHandler ["http-bio-8080"] Sep 19, 2016
>>>> 10:08:23 AM org.apache.coyote.AbstractProtocol init
>>>>
>>>> INFO: Initializing ProtocolHandler ["ajp-bio-8009"] Sep 19, 2016
>>>> 10:08:23 AM org.apache.catalina.startup.Catalina load
>>>>
>>>> INFO: Initialization processed in 506 ms Sep 19, 2016 10:08:23 AM
>>>> org.apache.catalina.startup.Catalina start
>>>>
>>>> SEVERE: The required Server component failed to start so Tomcat is
>>>> unable to start.
>>>>
>>>> org.apache.catalina.LifecycleException: Failed to start component
>>>> [StandardServer[8005]]
>>>>
>>>>                 at org.apache.catalina.util.LifecycleBase.start(
>>>> LifecycleBase.java:154)
>>>>
>>>>                 at org.apache.catalina.startup.
>>>> Catalina.start(Catalina.java:689)
>>>>
>>>>                 at sun.reflect.NativeMethodAccessorImpl.invoke0(Native
>>>> Method)
>>>>
>>>>                 at sun.reflect.NativeMethodAccessorImpl.invoke(
>>>> NativeMethodAccessorImpl.java:62)
>>>>
>>>>                 at sun.reflect.DelegatingMethodAccessorImpl.invoke(
>>>> DelegatingMethodAccessorImpl.java:43)
>>>>
>>>>                 at java.lang.reflect.Method.invoke(Method.java:497)
>>>>
>>>>                 at org.apache.catalina.startup.
>>>> Bootstrap.start(Bootstrap.java:321)
>>>>
>>>>                 at org.apache.catalina.startup.
>>>> Bootstrap.main(Bootstrap.java:455)
>>>>
>>>> Caused by: java.lang.IllegalArgumentException: jmxremote.access (No
>>>> such file or directory)
>>>>
>>>>                 at javax.management.remote.rmi.
>>>> RMIConnectorServer.start(RMIConnectorServer.java:375)
>>>>
>>>>                 at org.apache.catalina.mbeans.
>>>> JmxRemoteLifecycleListener.createServer(JmxRemoteLifecycleListener.
>>>> java:313)
>>>>
>>>>                 at org.apache.catalina.mbeans.
>>>> JmxRemoteLifecycleListener.lifecycleEvent(JmxRemoteLifecycleListener.
>>>> java:259)
>>>>
>>>>                 at org.apache.catalina.util.LifecycleSupport.
>>>> fireLifecycleEvent(LifecycleSupport.java:117)
>>>>
>>>>                 at org.apache.catalina.util.LifecycleBase.
>>>> fireLifecycleEvent(LifecycleBase.java:90)
>>>>
>>>>                 at org.apache.catalina.util.LifecycleBase.
>>>> setStateInternal(LifecycleBase.java:402)
>>>>
>>>>                 at org.apache.catalina.util.LifecycleBase.setState(
>>>> LifecycleBase.java:347)
>>>>
>>>>                 at org.apache.catalina.core.
>>>> StandardServer.startInternal(StandardServer.java:724)
>>>>
>>>>                 at org.apache.catalina.util.LifecycleBase.start(
>>>> LifecycleBase.java:150)
>>>>
>>>>                 ... 7 more
>>>>
>>>> Caused by: java.io.FileNotFoundException: jmxremote.access (No such
>>>> file or directory)
>>>>
>>>>                 at java.io.FileInputStream.open0(Native Method)
>>>>
>>>>                 at java.io.FileInputStream.open(
>>>> FileInputStream.java:195)
>>>>
>>>>                 at java.io.FileInputStream.<init>
>>>> (FileInputStream.java:138)
>>>>
>>>>                 at java.io.FileInputStream.<init>
>>>> (FileInputStream.java:93)
>>>>
>>>>                 at com.sun.jmx.remote.security.
>>>> MBeanServerFileAccessController.propertiesFromFile(
>>>> MBeanServerFileAccessController.java:294)
>>>>
>>>>                 at com.sun.jmx.remote.security.
>>>> MBeanServerFileAccessController.<init>(MBeanServerFileAccessControlle
>>>> r.java:133)
>>>>
>>>>                 at javax.management.remote.rmi.
>>>> RMIConnectorServer.start(RMIConnectorServer.java:372)
>>>>
>>>>                 ... 15 more
>>>>
>>>>
>>>>
>>>> Sep 19, 2016 10:08:23 AM org.apache.catalina.util.LifecycleBase destroy
>>>>
>>>> WARNING: Calling stop() on failed component [StandardServer[8005]] to
>>>> trigger clean-up did not complete.
>>>>
>>>> org.apache.catalina.LifecycleException: Failed to stop component
>>>> [StandardServer[8005]]
>>>>
>>>>                 at org.apache.catalina.util.LifecycleBase.stop(
>>>> LifecycleBase.java:236)
>>>>
>>>>                 at org.apache.catalina.util.LifecycleBase.destroy(
>>>> LifecycleBase.java:272)
>>>>
>>>>                 at org.apache.catalina.startup.
>>>> Catalina.start(Catalina.java:693)
>>>>
>>>>                 at sun.reflect.NativeMethodAccessorImpl.invoke0(Native
>>>> Method)
>>>>
>>>>                 at sun.reflect.NativeMethodAccessorImpl.invoke(
>>>> NativeMethodAccessorImpl.java:62)
>>>>
>>>>                 at sun.reflect.DelegatingMethodAccessorImpl.invoke(
>>>> DelegatingMethodAccessorImpl.java:43)
>>>>
>>>>                 at java.lang.reflect.Method.invoke(Method.java:497)
>>>>
>>>>                 at org.apache.catalina.startup.
>>>> Bootstrap.start(Bootstrap.java:321)
>>>>
>>>>                 at org.apache.catalina.startup.
>>>> Bootstrap.main(Bootstrap.java:455)
>>>>
>>>> Caused by: org.apache.catalina.LifecycleException: An invalid
>>>> Lifecycle transition was attempted ([before_stop]) for component
>>>> [StandardService[Catalina]] in state [INITIALIZED]
>>>>
>>>>                 at org.apache.catalina.util.LifecycleBase.
>>>> invalidTransition(LifecycleBase.java:409)
>>>>
>>>>                 at org.apache.catalina.util.LifecycleBase.stop(
>>>> LifecycleBase.java:219)
>>>>
>>>>                 at org.apache.catalina.core.
>>>> StandardServer.stopInternal(StandardServer.java:752)
>>>>
>>>>                 at org.apache.catalina.util.LifecycleBase.stop(
>>>> LifecycleBase.java:232)
>>>>
>>>>                 ... 8 more
>>>>
>>>>
>>>>
>>>> Sep 19, 2016 10:08:23 AM org.apache.coyote.AbstractProtocol destroy
>>>>
>>>> INFO: Destroying ProtocolHandler ["http-bio-8080"] Sep 19, 2016
>>>> 10:08:23 AM org.apache.coyote.AbstractProtocol destroy
>>>>
>>>> INFO: Destroying ProtocolHandler ["ajp-bio-8009"] Sep 19, 2016 10:08:24
>>>> AM org.apache.catalina.startup.Catalina stopServer
>>>>
>>>> SEVERE: Could not contact localhost:8005. Tomcat may not be running.
>>>>
>>>> Sep 19, 2016 10:08:24 AM org.apache.catalina.startup.Catalina
>>>> stopServer
>>>>
>>>> SEVERE: Catalina.stop:
>>>>
>>>> java.net.ConnectException: Connection refused
>>>>
>>>>                 at java.net.PlainSocketImpl.socketConnect(Native
>>>> Method)
>>>>
>>>>                 at java.net.AbstractPlainSocketImpl.doConnect(
>>>> AbstractPlainSocketImpl.java:345)
>>>>
>>>>                 at java.net.AbstractPlainSocketImpl.connectToAddress(
>>>> AbstractPlainSocketImpl.java:206)
>>>>
>>>>                 at java.net.AbstractPlainSocketImpl.connect(
>>>> AbstractPlainSocketImpl.java:188)
>>>>
>>>>                 at java.net.SocksSocketImpl.
>>>> connect(SocksSocketImpl.java:392)
>>>>
>>>>                 at java.net.Socket.connect(Socket.java:589)
>>>>
>>>>                 at java.net.Socket.connect(Socket.java:538)
>>>>
>>>>                 at java.net.Socket.<init>(Socket.java:434)
>>>>
>>>>                 at java.net.Socket.<init>(Socket.java:211)
>>>>
>>>>                 at org.apache.catalina.startup.
>>>> Catalina.stopServer(Catalina.java:498)
>>>>
>>>>                 at sun.reflect.NativeMethodAccessorImpl.invoke0(Native
>>>> Method)
>>>>
>>>>                 at sun.reflect.NativeMethodAccessorImpl.invoke(
>>>> NativeMethodAccessorImpl.java:62)
>>>>
>>>>                 at sun.reflect.DelegatingMethodAccessorImpl.invoke(
>>>> DelegatingMethodAccessorImpl.java:43)
>>>>
>>>>                 at java.lang.reflect.Method.invoke(Method.java:497)
>>>>
>>>>                 at org.apache.catalina.startup.Bootstrap.stopServer(
>>>> Bootstrap.java:370)
>>>>
>>>>                 at org.apache.catalina.startup.
>>>> Bootstrap.main(Bootstrap.java:457)
>>>>
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>>>>
>>> --
>>>
>>> Alan Orth
>>> alan.o...@gmail.com
>>> https://englishbulgaria.net
>>> https://alaninkenya.org
>>> https://mjanja.ch
>>>
>>> --
>>> You received this message because you are subscribed to the Google
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>>> To unsubscribe from this group and stop receiving emails from it, send
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>>>
>>
>> --
>
> Alan Orth
> alan.o...@gmail.com
> https://englishbulgaria.net
> https://alaninkenya.org
> https://mjanja.ch
>

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