Hello,
to cut a long story short,
I changed the Mac OS X default java engine
To the latest Java 6 64-bit Engine installed
by using the Java Preferences Tool in the
Utilites folder and now it works. Strange
enough. Maybe I have changed something else
alongside during my tests, but ...
Thanks for sharing your brain-brawn.
Christian Völker
Am 17.12.2008 um 05:18 schrieb Kim Shepherd:
> Hi Christian,
>
> The maven build looks OK to me. Looking at another post today made
> me think to ask a (possibly obvious) question: have you created a
> database owned by the appropriate user on the machine that Eclipse
> is on and changed [dspace-source]/dspace/config/dspace.cfg to match
> the right settings?
No question can be too trivial. I did not
mention that. Yes, the database is avai-
lable and all the tables get created
during ant fresh_install. I also dropped
all tables between each run of
ant fresh_install. It only breaks while
loading registries into the database.
I also checked encoding which is UTF8
by default in my postgres instance.
The idea was, that until loading the
registries all tables are empty and
it might indicate some incompatibility
of data types when an error appears
as soon as I try to write into a table.
Postgres Version might also be an issue?
[MacBookCV:~] cvoelker% psql
Welcome to psql 8.3.4, the PostgreSQL interactive terminal.
(...)
postgres=# create database dspace owner dspace;
CREATE DATABASE
postgres=# \l
List of databases
Name | Owner | Encoding
-----------+----------+----------
dspace | dspace | UTF8
postgres | postgres | UTF8
template0 | postgres | UTF8
template1 | postgres | UTF8
(4 rows)
I think you are right that there is some-
thing wrong on the java side. But I dont
know whether there is a log already at
this stage. I guess there should be one,
but I cant find it. I know only the place
where it should be, but not the name.
I cam to ask myself this question because
shortly before the error, there is this
entry in the Eclispe console window pane:
[java] 2008-12-15 02:30:52,174 INFO
org.dspace.core.ConfigurationManager @ Using default log4j provided
log configuration,if uninitended, check your dspace.cfg for
(log.init.config)
My dspace.cfg has this entry, which was
expanded from dspace.dir during instal-
lation I guess:
log.init.config = /Users/cvoelker/Documents/dspace/config/
log4j.properties
# Where to put the logs (used in configuration only)
log.dir = /Users/cvoelker/Documents/dspace/log
This directory is still empty. The directory
was created during ant fresh_install. As
thus, I cannot have done anything wrong
regarding privileges. It should be writeable
to the ant task. It would probably be help-
ful to see, what are the first entries in
this proposed log file during a run of
ant fresh_install. If it starts with an
entry regarding loading registries into
the database, then it would be a strong
hint, that logging is an issue for me.
Another requirement for this step could
be the availablility of the registry tem-
plates. There are three of them in either
dspace-source in the eclipse workspace
and in the dspace install directory under
config/registries, one for bitstreams,
one for Dublin Core and one for Sword.
I guess that is fine. Specificall, the
ant task fails while loading the bitstream
formats, which are available.
Again, where could I search for more Infor-
mation about the error? On the other hand,
even a log file would not provide more info
than the console window pane did already.
this one is particularly clear:
[java] 2008-12-15 02:30:52,696 FATAL
org.dspace.administer.RegistryLoader @
anonymous::error_loading_registries:
[java] java.lang.NullPointerException
[java] at
org.dspace.storage.rdbms.TableRow.canonicalize(TableRow.java:611)
Can this have to do with a problem within
the Java Runtime in use? I have MacOS 10.5.5
default, which is:
[MacBookCV:~] cvoelker% java -version
java version "1.5.0_16"
Java(TM) 2 Runtime Environment, Standard Edition (build 1.5.0_16-
b06-284)
Java HotSpot(TM) Client VM (build 1.5.0_16-133, mixed mode, sharing)
>> -----Original Message-----
>> From: Christian Voelker [mailto:c.voel...@gmx.net]
>> Sent: Tuesday, 16 December 2008 3:15 p.m.
>> To: Kim Shepherd
>> Subject: Re: [Dspace-tech] TableRow.canonicalize error with postgres
>>
>> Hello Kim,
>>
>> thanks for pointing me to that earlier stage of the whole process.
>> Unhappily I could not find anything going wrong there already.
>> See below for more details,
>>
>> Thanks, Christian
>>
>>
>> Am 15.12.2008 um 03:25 schrieb Kim Shepherd:
>>
>>> Hi Christian,
>>>
>>> Did Maven report anything strange during build?
>>
>> No, nothing that I noticed. In console window, when it comes to a
>> halt,
>> you just see these last four or five lines which read essentially
>> "Build successful". It was very similar to the example in the wiki
>> besides taking much more time, probably because it had to download a
>> lot of stuff running the first time. I did actually build twice with
>> the same result.
>> I followed approach B), separate projects.
>> I wonder, why one of the folder decorators looks like a snow flake.
>>
>> Ok, I ran the dspace clean maven task and the dspace assemble maven
>> task and went through the build log. Everything was [Info] except
>> three
>> lines:
>>
>> [WARNING]
>>
>> DEPRECATED: Binding aggregator mojos to lifecycle phases in the POM
>> is
>> considered dangerous.
>> This feature has been deprecated. Please adjust your POM files
>> accordingly.
>>
>> Offending mojo:
>>
>> org.apache.maven.plugins:maven-assembly-plugin:2.2-beta-1:attached
>>
>> Project: org.dspace:dspace-lni-client:jar:1.5.2-SNAPSHOT
>> POM File: /Users/cvoelker/Documents/workspace/dspace-lni/dspace-lni-
>> client/pom.xml
>>
>> [INFO] [assembly:attached]
>>
>> (...)
>>
>> [INFO] Reading assembly descriptor: /Users/cvoelker/Documents/
>> workspace/dspace/src/assemble/assembly.xml
>> [INFO] Initializing assembly filters...
>> [INFO] Processing DependencySet (output=lib) [WARNING] The following
>> patterns were never triggered in this artifact exclusion filter:
>> o '*:war:*'
>>
>> [WARNING] The following patterns were never triggered in this
>> artifact
>> exclusion filter:
>> o 'org.dspace:dspace-xmlui-lang'
>>
>>
>> As my question has to do a lot with not being familiar with
>> Eclipse, I
>> take the freedom to include two screenshots in a mail to the list:
>
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