Dear Mr. Gibson Are you advising re-installation of Dspace 5.2?
On 7/10/15, Hilton Gibson <hilton.gib...@gmail.com> wrote: > http://wiki.lib.sun.ac.za/index.php/SUNScholar/Upgrading/Server_Software > > *Hilton Gibson* > Ubuntu Linux Systems Administrator > Stellenbosch University Library > http://staff.lib.sun.ac.za/~hgibson/docs/cv/cv.html > > > On 10 July 2015 at 13:15, P. S. Mukhopadhyay <psmukhopadh...@gmail.com> > wrote: > >> Dear all >> >> I'm using tomcat 7 (version 7.0.26); Java-Oracle 1.7 with other requsite >> software on Ubuntu 12.04. Dspace 5.2 installed successfully. >> >> ---------------- >> sudo /dspace/bin/dspace database test >> [sudo] password for psm: >> >> Attempting to connect to database using these configurations: >> - URL: jdbc:postgresql://localhost:5432/dspace >> - Driver: org.postgresql.Driver >> - Username: dspace >> - Password: [hidden] >> - Schema: >> >> Testing connection... >> Connected successfully! >> ---------------------------------- >> sudo /dspace/bin/dspace database info >> >> Database URL: jdbc:postgresql://localhost:5432/dspace >> Database Schema: public >> Database Software: PostgreSQL version 9.1.13 >> Database Driver: PostgreSQL Native Driver version PostgreSQL 9.1 JDBC4 >> (build 901) >> >> ------------------------------------------------------ >> >> sudo /dspace/bin/dspace test-email >> >> About to send test email: >> - To: dspace@localhost >> - Subject: DSpace test email >> - Server: localhost >> >> Email sent successfully! >> >> ---------------------------------------------------------- >> >> Tomcat7 is using Java 1.7; localhost:8080 shows tomcat homepage but >> localhost:8080/jspui or localhost:8080/xmlui is showing problem in >> connection after huge delay. >> >> catlina.out >> -------------------------- >> >> Jul 10, 2015 4:40:59 PM org.apache.catalina.startup.SetAllPropertiesRule >> begin >> WARNING: [SetAllPropertiesRule]{Server/Service/Connector} Setting >> property >> 'maxSpareThreads' to '75' did not find a matching property. >> Jul 10, 2015 4:41:01 PM org.apache.coyote.AbstractProtocol init >> INFO: Initializing ProtocolHandler ["http-bio-8080"] >> Jul 10, 2015 4:41:01 PM org.apache.catalina.startup.Catalina load >> INFO: Initialization processed in 3105 ms >> Jul 10, 2015 4:41:01 PM org.apache.catalina.core.StandardService >> startInternal >> INFO: Starting service Catalina >> Jul 10, 2015 4:41:01 PM org.apache.catalina.core.StandardEngine >> startInternal >> INFO: Starting Servlet Engine: Apache Tomcat/7.0.26 >> Jul 10, 2015 4:41:01 PM org.apache.catalina.startup.HostConfig >> deployDescriptor >> INFO: Deploying configuration descriptor >> /etc/tomcat7/Catalina/localhost/manager.xml >> Jul 10, 2015 4:41:02 PM org.apache.catalina.startup.HostConfig >> deployDescriptor >> INFO: Deploying configuration descriptor >> /etc/tomcat7/Catalina/localhost/host-manager.xml >> Jul 10, 2015 4:41:02 PM org.apache.catalina.startup.HostConfig >> deployDirectory >> INFO: Deploying web application directory /var/lib/tomcat7/webapps/rest >> Jul 10, 2015 4:41:09 PM org.apache.catalina.loader.WebappClassLoader >> validateJarFile >> INFO: >> validateJarFile(/var/lib/tomcat7/webapps/rest/WEB-INF/lib/servlet-api-2.5-20081211.jar) >> - jar not loaded. See Servlet Spec 2.3, section 9.7.2. Offending class: >> javax/servlet/Servlet.class >> INFO: Loading provided config file: /dspace/config/dspace.cfg >> INFO: Using dspace provided log configuration (log.init.config) >> INFO: Loading: /dspace/config/log4j.properties >> Jul 10, 2015 4:41:16 PM com.sun.jersey.api.core.PackagesResourceConfig >> init >> INFO: Scanning for root resource and provider classes in the packages: >> org.dspace.rest >> Jul 10, 2015 4:41:16 PM com.sun.jersey.api.core.ScanningResourceConfig >> logClasses >> INFO: Root resource classes found: >> class org.dspace.rest.ItemsResource >> class org.dspace.rest.CommunitiesResource >> class org.dspace.rest.RestIndex >> class org.dspace.rest.CollectionsResource >> class org.dspace.rest.HandleResource >> class org.dspace.rest.BitstreamResource >> Jul 10, 2015 4:41:16 PM com.sun.jersey.api.core.ScanningResourceConfig >> init >> INFO: No provider classes found. >> Jul 10, 2015 4:41:17 PM >> com.sun.jersey.spi.spring.container.servlet.SpringServlet getContext >> INFO: Using default applicationContext >> Jul 10, 2015 4:41:17 PM >> com.sun.jersey.server.impl.application.WebApplicationImpl _initiate >> INFO: Initiating Jersey application, version 'Jersey: 1.17.1 02/28/2013 >> 12:47 PM' >> Jul 10, 2015 4:41:19 PM org.apache.catalina.startup.HostConfig >> deployDirectory >> INFO: Deploying web application directory >> /var/lib/tomcat7/webapps/swordv2 >> Jul 10, 2015 4:41:22 PM org.apache.catalina.loader.WebappClassLoader >> validateJarFile >> INFO: >> validateJarFile(/var/lib/tomcat7/webapps/swordv2/WEB-INF/lib/servlet-api-2.5-20081211.jar) >> - jar not loaded. See Servlet Spec 2.3, section 9.7.2. Offending class: >> javax/servlet/Servlet.class >> INFO [pool-2-thread-1] (DSpaceKernelInit.java:52) - Created new kernel: >> DSpaceKernel:org.dspace:name=c3794bd6-5c8f-4abc-b998-cdbc8215937e,type=DSpaceKernel:lastLoad=null:loadTime=0:running=false:kernel=null >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:592) - Loaded 5 >> config properties from resource: class path resource >> [config/dspace-defaults.cfg] >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded1 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded0 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded3 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded2 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded2 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded6 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded0 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded0 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded30 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded1 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded1 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded6 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded91 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded2 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded0 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded5 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded14 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded14 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded13 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded0 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded1 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded1 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded3 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded1 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded4 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded0 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded0 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded5 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:618) - Loaded2 >> config properties from stream >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:565) - Loaded >> 247 >> config properties from file: /dspace/config/dspace.cfg >> INFO [pool-2-thread-1] (DSpaceConfigurationService.java:467) - Started >> up >> configuration service and loaded 462 settings >> INFO [pool-2-thread-1] (AbstractApplicationContext.java:495) - >> Refreshing >> org.springframework.context.support.ClassPathXmlApplicationContext@1e9ffa: >> startup date [Fri Jul 10 16:41:23 IST 2015]; root of context hierarchy >> INFO [pool-2-thread-1] (XmlBeanDefinitionReader.java:315) - Loading XML >> bean definitions from class path resource >> [spring/spring-dspace-applicationContext.xml] >> INFO [pool-2-thread-1] (XmlBeanDefinitionReader.java:315) - Loading XML >> bean definitions from URL >> [jar:file:/var/lib/tomcat7/webapps/swordv2/WEB-INF/lib/additions-5.2.jar!/spring/spring-dspace-addon-example-services.xml] >> INFO [pool-2-thread-1] (XmlBeanDefinitionReader.java:315) - Loading XML >> bean definitions from URL >> [jar:file:/var/lib/tomcat7/webapps/swordv2/WEB-INF/lib/dspace-api-5.2.jar!/spring/spring-dspace-addon-requestitem-services.xml] >> INFO [pool-2-thread-1] (XmlBeanDefinitionReader.java:315) - Loading XML >> bean definitions from URL >> [jar:file:/var/lib/tomcat7/webapps/swordv2/WEB-INF/lib/dspace-api-5.2.jar!/spring/spring-dspace-addon-sherpa-services.xml] >> INFO [pool-2-thread-1] (XmlBeanDefinitionReader.java:315) - Loading XML >> bean definitions from URL >> [jar:file:/var/lib/tomcat7/webapps/swordv2/WEB-INF/lib/dspace-api-5.2.jar!/spring/spring-dspace-addon-discovery-services.xml] >> INFO [pool-2-thread-1] (XmlBeanDefinitionReader.java:315) - Loading XML >> bean definitions from URL >> [jar:file:/var/lib/tomcat7/webapps/swordv2/WEB-INF/lib/dspace-api-5.2.jar!/spring/spring-dspace-addon-sherpa-configuration-services.xml] >> INFO [pool-2-thread-1] (XmlBeanDefinitionReader.java:315) - Loading XML >> bean definitions from URL >> [jar:file:/var/lib/tomcat7/webapps/swordv2/WEB-INF/lib/dspace-api-5.2.jar!/spring/spring-dspace-core-services.xml] >> INFO [pool-2-thread-1] (XmlBeanDefinitionReader.java:315) - Loading XML >> bean definitions from URL >> [jar:file:/var/lib/tomcat7/webapps/swordv2/WEB-INF/lib/dspace-services-5.2.jar!/spring/spring-dspace-core-services.xml] >> INFO [pool-2-thread-1] (XmlBeanDefinitionReader.java:315) - Loading XML >> bean definitions from file [/dspace/config/spring/api/requestitem.xml] >> INFO [pool-2-thread-1] (DefaultListableBeanFactory.java:623) - >> Overriding >> bean definition for bean >> 'org.dspace.app.requestitem.RequestItemAuthorExtractor': replacing >> [Generic >> bean: class [org.dspace.app.requestitem.RequestItemMetadataStrategy]; >> scope=; abstract=false; lazyInit=false; autowireMode=0; >> dependencyCheck=0; >> autowireCandidate=false; primary=false; factoryBeanName=null; >> factoryMethodName=null; initMethodName=null; destroyMethodName=null; >> defined in URL >> [jar:file:/var/lib/tomcat7/webapps/swordv2/WEB-INF/lib/dspace-api-5.2.jar!/spring/spring-dspace-addon-requestitem-services.xml]] >> with [Generic bean: class >> [org.dspace.app.requestitem.RequestItemMetadataStrategy]; scope=; >> abstract=false; lazyInit=false; autowireMode=0; dependencyCheck=0; >> autowireCandidate=false; primary=false; factoryBeanName=null; >> factoryMethodName=null; initMethodName=null; destroyMethodName=null; >> defined in file [/dspace/config/spring/api/requestitem.xml]] >> INFO [pool-2-thread-1] (XmlBeanDefinitionReader.java:315) - Loading XML >> bean definitions from file >> [/dspace/config/spring/api/identifier-service.xml] >> INFO [pool-2-thread-1] (DefaultListableBeanFactory.java:623) - >> Overriding >> bean definition for bean 'org.dspace.identifier.IdentifierService': >> replacing [Generic bean: class >> [org.dspace.identifier.IdentifierServiceImpl]; scope=singleton; >> abstract=false; lazyInit=false; autowireMode=2; dependencyCheck=0; >> autowireCandidate=true; primary=false; factoryBeanName=null; >> factoryMethodName=null; initMethodName=null; destroyMethodName=null; >> defined in URL >> [jar:file:/var/lib/tomcat7/webapps/swordv2/WEB-INF/lib/dspace-api-5.2.jar!/spring/spring-dspace-core-services.xml]] >> with [Generic bean: class [org.dspace.identifier.IdentifierServiceImpl]; >> scope=singleton; abstract=false; lazyInit=false; autowireMode=2; >> dependencyCheck=0; autowireCandidate=true; primary=false; >> factoryBeanName=null; factoryMethodName=null; initMethodName=null; >> destroyMethodName=null; defined in file >> [/dspace/config/spring/api/identifier-service.xml]] >> INFO [pool-2-thread-1] (XmlBeanDefinitionReader.java:315) - Loading XML >> bean definitions from file [/dspace/config/spring/api/discovery.xml] >> INFO [pool-2-thread-1] (XmlBeanDefinitionReader.java:315) - Loading XML >> bean definitions from file [/dspace/config/spring/api/item-marking.xml] >> INFO [pool-2-thread-1] (XmlBeanDefinitionReader.java:315) - Loading XML >> bean definitions from file [/dspace/config/spring/api/discovery-solr.xml] >> INFO [pool-2-thread-1] (XmlBeanDefinitionReader.java:315) - Loading XML >> bean definitions from file >> [/dspace/config/spring/api/versioning-service.xml] >> INFO [pool-2-thread-1] (XmlBeanDefinitionReader.java:315) - Loading XML >> bean definitions from file >> [/dspace/config/spring/api/orcid-authority-services.xml] >> INFO [pool-2-thread-1] (XmlBeanDefinitionReader.java:315) - Loading XML >> bean definitions from file [/dspace/config/spring/api/sherpa.xml] >> INFO [pool-2-thread-1] (DefaultListableBeanFactory.java:623) - >> Overriding >> bean definition for bean >> 'org.dspace.app.sherpa.submit.SHERPASubmitConfigurationService': >> replacing >> [Generic bean: class >> [org.dspace.app.sherpa.submit.SHERPASubmitConfigurationService]; scope=; >> abstract=false; lazyInit=false; autowireMode=0; dependencyCheck=0; >> autowireCandidate=true; primary=false; factoryBeanName=null; >> factoryMethodName=null; initMethodName=null; destroyMethodName=null; >> defined in URL >> [jar:file:/var/lib/tomcat7/webapps/swordv2/WEB-INF/lib/dspace-api-5.2.jar!/spring/spring-dspace-addon-sherpa-configuration-services.xml]] >> with [Generic bean: class >> [org.dspace.app.sherpa.submit.SHERPASubmitConfigurationService]; scope=; >> abstract=false; lazyInit=false; autowireMode=0; dependencyCheck=0; >> autowireCandidate=true; primary=false; factoryBeanName=null; >> factoryMethodName=null; initMethodName=null; destroyMethodName=null; >> defined in file [/dspace/config/spring/api/sherpa.xml]] >> INFO [pool-2-thread-1] (XmlBeanDefinitionReader.java:315) - Loading XML >> bean definitions from file [/dspace/config/spring/api/bte.xml] >> INFO [pool-2-thread-1] (XmlBeanDefinitionReader.java:315) - Loading XML >> bean definitions from file >> [/dspace/config/spring/api/workflow-actions.xml] >> INFO [pool-2-thread-1] (AutowiredAnnotationBeanPostProcessor.java:139) - >> JSR-330 'javax.inject.Inject' annotation found and supported for >> autowiring >> INFO [pool-2-thread-1] (DefaultListableBeanFactory.java:557) - >> Pre-instantiating singletons in >> org.springframework.beans.factory.support.DefaultListableBeanFactory@745a45: >> defining beans >> [org.springframework.context.annotation.internalConfigurationAnnotationProcessor,org.springframework.context.annotation.internalAutowiredAnnotationProcessor,org.springframework.context.annotation.internalRequiredAnnotationProcessor,org.springframework.context.annotation.internalCommonAnnotationProcessor,org.dspace.servicemanager.spring.DSpaceBeanPostProcessor#0,org.dspace.example.Example,org.dspace.app.requestitem.RequestItemAuthorExtractor,org.dspace.app.sherpa.SHERPAService,org.dspace.app.sherpa.submit.SHERPASubmitService,org.dspace.discovery.SearchService,org.dspace.app.sherpa.submit.SHERPASubmitConfigurationService,org.dspace.identifier.IdentifierService,org.dspace.identifier.VersionedHandleIdentifierProvider,org.dspace.services.CachingService,org.dspace.caching.ehcache.CacheManager,org.dspace.services.SessionService,org.dspace.services.EventService,org.dspace.services.email.EmailServiceImpl,solrServiceResourceIndexPlugin,SolrServiceSpellIndexingPlugin,solrBrowseIndexer,org.ds pace.discovery.configuration.DiscoveryConfigurationService,defaultConfiguration,homepageConfiguration,homepageTagCloudFacetConfiguration,defaultTagCloudFacetConfiguration,tagCloudConfiguration,browseTagCloudConfiguration,searchFilterTitle,searchFilterAuthor,searchFilterSubject,searchFilterIssued,sortTitle,sortDateIssued,org.dspace.app.itemmarking.ItemMarkingExtractor.type,org.dspace.app.itemmarking.ItemMarkingExtractor.availability,typeMap,collectionMap,org.dspace.util.MultiFormatDateParser,org.dspace.versioning.VersioningService,org.dspace.authority.AuthoritySearchService,dspace.DSpaceAuthorityIndexer,AuthorityTypes,OrcidSource,org.dspace.app.itemimport.BTEBatchImportService,batchImportTransformationEngine,batchImportLinearWorkflow,org.dspace.submit.lookup.SubmissionLookupService,phase1TransformationEngine,multipleDataLoader,org.dspace.submit.lookup.SubmissionLookupOutputGenerator,phase1LinearWorkflow,mapConverter_arxivSubject,mapConverter_pubstatusPubmed,removeLastDot,phase2Transf ormationEngine,submissionItemDataLoader,phase2linearWorkflow,fieldMergeModifier,valueConcatenationModifier,languageCodeModifier,org.dspace.submit.lookup.DSpaceWorkspaceItemOutputGenerator,bibTeXDataLoader,csvDataLoader,tsvDataLoader,risDataLoader,endnoteDataLoader,oaipmhDataLoader,pubmedOnlineDataLoader,pubmedFileDataLoader,pubmedInputMap,arXivOnlineDataLoader,arXivFileDataLoader,arxivInputMap,crossRefOnlineDataLoader,crossRefFileDataLoader,crossrefInputMap,ciniiOnlineDataLoader,ciniiFileDataLoader,ciniiInputMap,outputMap,claimactionAPI,reviewactionAPI,editactionAPI,finaleditactionAPI,singleuserreviewactionAPI,selectrevieweractionAPI,scorereviewactionAPI,evaluationactionAPI,autoassignactionAPI,noUserSelectionActionAPI,assignoriginalsubmitteractionAPI,reviewaction,editaction,finaleditaction,selectrevieweraction,singleuserreviewaction,scorereviewaction,evaluationaction,claimaction,autoassignAction,noUserSelectionAction,originalSubmitterAssignAction,org.springframework.context.annotati on.ConfigurationClassPostProcessor$ImportAwareBeanPostProcessor#0]; >> root of factory hierarchy >> INFO [pool-2-thread-1] (SessionRequestServiceImpl.java:64) - init >> INFO [pool-2-thread-1] (EhCacheManagerFactoryBean.java:100) - >> Initializing EHCache CacheManager >> INFO [pool-2-thread-1] (CachingServiceImpl.java:223) - init() >> INFO [pool-2-thread-1] (CachingServiceImpl.java:265) - Caching service >> initialized: >> ** Memory report >> freeMemory: 7494608 >> totalMemory: 25587712 >> maxMemory: 129761280 >> >> ** Full report of all known caches (0): >> >> WARN [pool-2-thread-1] (EmailServiceImpl.java:76) - Couldn't get an >> email >> session from environment: Name mail is not bound in this Context >> INFO [pool-2-thread-1] (EmailServiceImpl.java:86) - Initializing an >> email >> session from configuration. >> INFO [pool-2-thread-1] (DefaultListableBeanFactory.java:557) - >> Pre-instantiating singletons in >> org.springframework.beans.factory.support.DefaultListableBeanFactory@745a45: >> defining beans >> [org.springframework.context.annotation.internalConfigurationAnnotationProcessor,org.springframework.context.annotation.internalAutowiredAnnotationProcessor,org.springframework.context.annotation.internalRequiredAnnotationProcessor,org.springframework.context.annotation.internalCommonAnnotationProcessor,org.dspace.servicemanager.spring.DSpaceBeanPostProcessor#0,org.dspace.example.Example,org.dspace.app.requestitem.RequestItemAuthorExtractor,org.dspace.app.sherpa.SHERPAService,org.dspace.app.sherpa.submit.SHERPASubmitService,org.dspace.discovery.SearchService,org.dspace.app.sherpa.submit.SHERPASubmitConfigurationService,org.dspace.identifier.IdentifierService,org.dspace.identifier.VersionedHandleIdentifierProvider,org.dspace.services.CachingService,org.dspace.caching.ehcache.CacheManager,org.dspace.services.SessionService,org.dspace.services.EventService,org.dspace.services.email.EmailServiceImpl,solrServiceResourceIndexPlugin,SolrServiceSpellIndexingPlugin,solrBrowseIndexer,org.ds pace.discovery.configuration.DiscoveryConfigurationService,defaultConfiguration,homepageConfiguration,homepageTagCloudFacetConfiguration,defaultTagCloudFacetConfiguration,tagCloudConfiguration,browseTagCloudConfiguration,searchFilterTitle,searchFilterAuthor,searchFilterSubject,searchFilterIssued,sortTitle,sortDateIssued,org.dspace.app.itemmarking.ItemMarkingExtractor.type,org.dspace.app.itemmarking.ItemMarkingExtractor.availability,typeMap,collectionMap,org.dspace.util.MultiFormatDateParser,org.dspace.versioning.VersioningService,org.dspace.authority.AuthoritySearchService,dspace.DSpaceAuthorityIndexer,AuthorityTypes,OrcidSource,org.dspace.app.itemimport.BTEBatchImportService,batchImportTransformationEngine,batchImportLinearWorkflow,org.dspace.submit.lookup.SubmissionLookupService,phase1TransformationEngine,multipleDataLoader,org.dspace.submit.lookup.SubmissionLookupOutputGenerator,phase1LinearWorkflow,mapConverter_arxivSubject,mapConverter_pubstatusPubmed,removeLastDot,phase2Transf ormationEngine,submissionItemDataLoader,phase2linearWorkflow,fieldMergeModifier,valueConcatenationModifier,languageCodeModifier,org.dspace.submit.lookup.DSpaceWorkspaceItemOutputGenerator,bibTeXDataLoader,csvDataLoader,tsvDataLoader,risDataLoader,endnoteDataLoader,oaipmhDataLoader,pubmedOnlineDataLoader,pubmedFileDataLoader,pubmedInputMap,arXivOnlineDataLoader,arXivFileDataLoader,arxivInputMap,crossRefOnlineDataLoader,crossRefFileDataLoader,crossrefInputMap,ciniiOnlineDataLoader,ciniiFileDataLoader,ciniiInputMap,outputMap,claimactionAPI,reviewactionAPI,editactionAPI,finaleditactionAPI,singleuserreviewactionAPI,selectrevieweractionAPI,scorereviewactionAPI,evaluationactionAPI,autoassignactionAPI,noUserSelectionActionAPI,assignoriginalsubmitteractionAPI,reviewaction,editaction,finaleditaction,selectrevieweraction,singleuserreviewaction,scorereviewaction,evaluationaction,claimaction,autoassignAction,noUserSelectionAction,originalSubmitterAssignAction,org.springframework.context.annotati on.ConfigurationClassPostProcessor$ImportAwareBeanPostProcessor#0]; >> root of factory hierarchy >> INFO [pool-2-thread-1] (SpringServiceManager.java:216) - Spring Service >> Manager started up in 3271 ms with 104 services... >> INFO [pool-2-thread-1] (DSpaceKernelImpl.java:162) - DSpace kernel >> startup completed in 3523 ms and registered as MBean: >> org.dspace:name=c3794bd6-5c8f-4abc-b998-cdbc8215937e,type=DSpaceKernel >> INFO [pool-2-thread-1] (ConfigurationManager.java:955) - Loading >> provided >> config file: /dspace/config/dspace.cfg >> INFO [pool-2-thread-1] (ConfigurationManager.java:955) - Using dspace >> provided log configuration (log.init.config) >> INFO [pool-2-thread-1] (ConfigurationManager.java:955) - Loading: >> /dspace/config/log4j.properties >> Jul 10, 2015 4:41:26 PM org.apache.catalina.startup.HostConfig >> deployDirectory >> INFO: Deploying web application directory /var/lib/tomcat7/webapps/jspui >> Jul 10, 2015 4:41:27 PM org.apache.catalina.loader.WebappClassLoader >> validateJarFile >> INFO: >> validateJarFile(/var/lib/tomcat7/webapps/jspui/WEB-INF/lib/servlet-api-2.5-20081211.jar) >> - jar not loaded. See Servlet Spec 2.3, section 9.7.2. Offending class: >> javax/servlet/Servlet.class >> Jul 10, 2015 4:41:28 PM org.apache.catalina.startup.TaglibUriRule body >> INFO: TLD skipped. URI: http://java.sun.com/jstl/fmt is already defined >> Jul 10, 2015 4:41:28 PM org.apache.catalina.startup.TaglibUriRule body >> INFO: TLD skipped. URI: http://java.sun.com/jstl/fmt is already defined >> log4j:WARN No appenders could be found for logger >> (org.dspace.servicemanager.DSpaceKernelInit). >> log4j:WARN Please initialize the log4j system properly. >> log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for >> more info. >> INFO: Loading provided config file: /dspace/config/dspace.cfg >> INFO: Using dspace provided log configuration (log.init.config) >> INFO: Loading: /dspace/config/log4j.properties >> Jul 10, 2015 4:41:33 PM org.apache.catalina.startup.HostConfig >> deployDirectory >> INFO: Deploying web application directory /var/lib/tomcat7/webapps/ROOT >> Jul 10, 2015 4:41:33 PM org.apache.catalina.startup.HostConfig >> deployDirectory >> INFO: Deploying web application directory /var/lib/tomcat7/webapps/solr >> Jul 10, 2015 4:41:44 PM org.apache.catalina.startup.HostConfig >> deployDirectory >> INFO: Deploying web application directory /var/lib/tomcat7/webapps/rdf >> Jul 10, 2015 4:41:47 PM org.apache.catalina.loader.WebappClassLoader >> validateJarFile >> INFO: >> validateJarFile(/var/lib/tomcat7/webapps/rdf/WEB-INF/lib/servlet-api-2.5-20081211.jar) >> - jar not loaded. See Servlet Spec 2.3, section 9.7.2. Offending class: >> javax/servlet/Servlet.class >> INFO: Loading provided config file: /dspace/config/dspace.cfg >> INFO: Using dspace provided log configuration (log.init.config) >> INFO: Loading: /dspace/config/log4j.properties >> Jul 10, 2015 4:41:52 PM org.apache.catalina.startup.HostConfig >> deployDirectory >> INFO: Deploying web application directory /var/lib/tomcat7/webapps/sword >> Jul 10, 2015 4:41:56 PM org.apache.catalina.loader.WebappClassLoader >> validateJarFile >> INFO: >> validateJarFile(/var/lib/tomcat7/webapps/sword/WEB-INF/lib/servlet-api-2.5-20081211.jar) >> - jar not loaded. See Servlet Spec 2.3, section 9.7.2. Offending class: >> javax/servlet/Servlet.class >> log4j:WARN No appenders could be found for logger >> (org.dspace.servicemanager.DSpaceKernelInit). >> log4j:WARN Please initialize the log4j system properly. >> log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for >> more info. >> INFO: Loading provided config file: /dspace/config/dspace.cfg >> INFO: Using dspace provided log configuration (log.init.config) >> INFO: Loading: /dspace/config/log4j.properties >> Jul 10, 2015 4:42:01 PM org.apache.catalina.startup.HostConfig >> deployDirectory >> INFO: Deploying web application directory /var/lib/tomcat7/webapps/xmlui >> Jul 10, 2015 4:42:05 PM org.apache.catalina.loader.WebappClassLoader >> validateJarFile >> INFO: >> validateJarFile(/var/lib/tomcat7/webapps/xmlui/WEB-INF/lib/servlet-api-2.5-20081211.jar) >> - jar not loaded. See Servlet Spec 2.3, section 9.7.2. Offending class: >> javax/servlet/Servlet.class >> INFO [org.dspace.servicemanager.DSpaceKernelInit] Created new kernel: >> DSpaceKernel:org.dspace:name=d9379481-46ef-4b55-876a-33802c90996f,type=DSpaceKernel:lastLoad=null:loadTime=0:running=false:kernel=null >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded >> 5 config properties from resource: class path resource >> [config/dspace-defaults.cfg] >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded1 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded0 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded3 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded2 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded2 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded6 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded0 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded0 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded30 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded1 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded1 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded6 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded91 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded2 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded0 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded5 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded14 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded14 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded13 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded0 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded1 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded1 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded3 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded1 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded4 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded0 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded0 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded5 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded2 config properties from stream >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Loaded >> 247 config properties from file: /dspace/config/dspace.cfg >> INFO [org.dspace.servicemanager.config.DSpaceConfigurationService] >> Started up configuration service and loaded 462 settings >> INFO >> [org.springframework.context.support.ClassPathXmlApplicationContext] >> Refreshing >> org.springframework.context.support.ClassPathXmlApplicationContext@46a13a: >> startup date [Fri Jul 10 16:42:06 IST 2015]; root of context hierarchy >> INFO [org.springframework.beans.factory.xml.XmlBeanDefinitionReader] >> Loading XML bean definitions from class path resource >> [spring/spring-dspace-applicationContext.xml] >> INFO [org.springframework.beans.factory.xml.XmlBeanDefinitionReader] >> Loading XML bean definitions from URL >> [jar:file:/var/lib/tomcat7/webapps/xmlui/WEB-INF/lib/additions-5.2.jar!/spring/spring-dspace-addon-example-services.xml] >> INFO [org.springframework.beans.factory.xml.XmlBeanDefinitionReader] >> Loading XML bean definitions from URL >> [jar:file:/var/lib/tomcat7/webapps/xmlui/WEB-INF/lib/dspace-api-5.2.jar!/spring/spring-dspace-addon-requestitem-services.xml] >> INFO [org.springframework.beans.factory.xml.XmlBeanDefinitionReader] >> Loading XML bean definitions from URL >> [jar:file:/var/lib/tomcat7/webapps/xmlui/WEB-INF/lib/dspace-api-5.2.jar!/spring/spring-dspace-addon-sherpa-services.xml] >> INFO [org.springframework.beans.factory.xml.XmlBeanDefinitionReader] >> Loading XML bean definitions from URL >> [jar:file:/var/lib/tomcat7/webapps/xmlui/WEB-INF/lib/dspace-api-5.2.jar!/spring/spring-dspace-addon-discovery-services.xml] >> INFO [org.springframework.beans.factory.xml.XmlBeanDefinitionReader] >> Loading XML bean definitions from URL >> [jar:file:/var/lib/tomcat7/webapps/xmlui/WEB-INF/lib/dspace-api-5.2.jar!/spring/spring-dspace-addon-sherpa-configuration-services.xml] >> INFO [org.springframework.beans.factory.xml.XmlBeanDefinitionReader] >> Loading XML bean definitions from URL >> [jar:file:/var/lib/tomcat7/webapps/xmlui/WEB-INF/lib/dspace-api-5.2.jar!/spring/spring-dspace-core-services.xml] >> INFO [org.springframework.beans.factory.xml.XmlBeanDefinitionReader] >> Loading XML bean definitions from URL >> [jar:file:/var/lib/tomcat7/webapps/xmlui/WEB-INF/lib/dspace-services-5.2.jar!/spring/spring-dspace-core-services.xml] >> INFO [org.springframework.beans.factory.xml.XmlBeanDefinitionReader] >> Loading XML bean definitions from file >> [/dspace/config/spring/api/requestitem.xml] >> INFO >> [org.springframework.beans.factory.support.DefaultListableBeanFactory] >> Overriding bean definition for bean >> 'org.dspace.app.requestitem.RequestItemAuthorExtractor': replacing >> [Generic >> bean: class [org.dspace.app.requestitem.RequestItemMetadataStrategy]; >> scope=; abstract=false; lazyInit=false; autowireMode=0; >> dependencyCheck=0; >> autowireCandidate=false; primary=false; factoryBeanName=null; >> factoryMethodName=null; initMethodName=null; destroyMethodName=null; >> defined in URL >> [jar:file:/var/lib/tomcat7/webapps/xmlui/WEB-INF/lib/dspace-api-5.2.jar!/spring/spring-dspace-addon-requestitem-services.xml]] >> with [Generic bean: class >> [org.dspace.app.requestitem.RequestItemMetadataStrategy]; scope=; >> abstract=false; lazyInit=false; autowireMode=0; dependencyCheck=0; >> autowireCandidate=false; primary=false; factoryBeanName=null; >> factoryMethodName=null; initMethodName=null; destroyMethodName=null; >> defined in file [/dspace/config/spring/api/requestitem.xml]] >> INFO [org.springframework.beans.factory.xml.XmlBeanDefinitionReader] >> Loading XML bean definitions from file >> [/dspace/config/spring/api/identifier-service.xml] >> INFO >> [org.springframework.beans.factory.support.DefaultListableBeanFactory] >> Overriding bean definition for bean >> 'org.dspace.identifier.IdentifierService': replacing [Generic bean: class >> [org.dspace.identifier.IdentifierServiceImpl]; scope=singleton; >> abstract=false; lazyInit=false; autowireMode=2; dependencyCheck=0; >> autowireCandidate=true; primary=false; factoryBeanName=null; >> factoryMethodName=null; initMethodName=null; destroyMethodName=null; >> defined in URL >> [jar:file:/var/lib/tomcat7/webapps/xmlui/WEB-INF/lib/dspace-api-5.2.jar!/spring/spring-dspace-core-services.xml]] >> with [Generic bean: class [org.dspace.identifier.IdentifierServiceImpl]; >> scope=singleton; abstract=false; lazyInit=false; autowireMode=2; >> dependencyCheck=0; autowireCandidate=true; primary=false; >> factoryBeanName=null; factoryMethodName=null; initMethodName=null; >> destroyMethodName=null; defined in file >> [/dspace/config/spring/api/identifier-service.xml]] >> INFO [org.springframework.beans.factory.xml.XmlBeanDefinitionReader] >> Loading XML bean definitions from file >> [/dspace/config/spring/api/discovery.xml] >> INFO [org.springframework.beans.factory.xml.XmlBeanDefinitionReader] >> Loading XML bean definitions from file >> [/dspace/config/spring/api/item-marking.xml] >> INFO [org.springframework.beans.factory.xml.XmlBeanDefinitionReader] >> Loading XML bean definitions from file >> [/dspace/config/spring/api/discovery-solr.xml] >> INFO [org.springframework.beans.factory.xml.XmlBeanDefinitionReader] >> Loading XML bean definitions from file >> [/dspace/config/spring/api/versioning-service.xml] >> INFO [org.springframework.beans.factory.xml.XmlBeanDefinitionReader] >> Loading XML bean definitions from file >> [/dspace/config/spring/api/orcid-authority-services.xml] >> INFO [org.springframework.beans.factory.xml.XmlBeanDefinitionReader] >> Loading XML bean definitions from file >> [/dspace/config/spring/api/sherpa.xml] >> INFO >> [org.springframework.beans.factory.support.DefaultListableBeanFactory] >> Overriding bean definition for bean >> 'org.dspace.app.sherpa.submit.SHERPASubmitConfigurationService': >> replacing >> [Generic bean: class >> [org.dspace.app.sherpa.submit.SHERPASubmitConfigurationService]; scope=; >> abstract=false; lazyInit=false; autowireMode=0; dependencyCheck=0; >> autowireCandidate=true; primary=false; factoryBeanName=null; >> factoryMethodName=null; initMethodName=null; destroyMethodName=null; >> defined in URL >> [jar:file:/var/lib/tomcat7/webapps/xmlui/WEB-INF/lib/dspace-api-5.2.jar!/spring/spring-dspace-addon-sherpa-configuration-services.xml]] >> with [Generic bean: class >> [org.dspace.app.sherpa.submit.SHERPASubmitConfigurationService]; scope=; >> abstract=false; lazyInit=false; autowireMode=0; dependencyCheck=0; >> autowireCandidate=true; primary=false; factoryBeanName=null; >> factoryMethodName=null; initMethodName=null; destroyMethodName=null; >> defined in file [/dspace/config/spring/api/sherpa.xml]] >> INFO [org.springframework.beans.factory.xml.XmlBeanDefinitionReader] >> Loading XML bean definitions from file >> [/dspace/config/spring/api/bte.xml] >> INFO [org.springframework.beans.factory.xml.XmlBeanDefinitionReader] >> Loading XML bean definitions from file >> [/dspace/config/spring/api/workflow-actions.xml] >> INFO [org.springframework.beans.factory.xml.XmlBeanDefinitionReader] >> Loading XML bean definitions from file >> [/dspace/config/spring/xmlui/workflow-actions-xmlui.xml] >> INFO >> [org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor] >> JSR-330 'javax.inject.Inject' annotation found and supported for >> autowiring >> INFO >> [org.springframework.beans.factory.support.DefaultListableBeanFactory] >> Pre-instantiating singletons in >> org.springframework.beans.factory.support.DefaultListableBeanFactory@1ca399: >> defining beans >> [org.springframework.context.annotation.internalConfigurationAnnotationProcessor,org.springframework.context.annotation.internalAutowiredAnnotationProcessor,org.springframework.context.annotation.internalRequiredAnnotationProcessor,org.springframework.context.annotation.internalCommonAnnotationProcessor,org.dspace.servicemanager.spring.DSpaceBeanPostProcessor#0,org.dspace.example.Example,org.dspace.app.requestitem.RequestItemAuthorExtractor,org.dspace.app.sherpa.SHERPAService,org.dspace.app.sherpa.submit.SHERPASubmitService,org.dspace.discovery.SearchService,org.dspace.app.sherpa.submit.SHERPASubmitConfigurationService,org.dspace.identifier.IdentifierService,org.dspace.identifier.VersionedHandleIdentifierProvider,org.dspace.services.CachingService,org.dspace.caching.ehcache.CacheManager,org.dspace.services.SessionService,org.dspace.services.EventService,org.dspace.services.email.EmailServiceImpl,solrServiceResourceIndexPlugin,SolrServiceSpellIndexingPlugin,solrBrowseIndexer,org.ds pace.discovery.configuration.DiscoveryConfigurationService,defaultConfiguration,homepageConfiguration,homepageTagCloudFacetConfiguration,defaultTagCloudFacetConfiguration,tagCloudConfiguration,browseTagCloudConfiguration,searchFilterTitle,searchFilterAuthor,searchFilterSubject,searchFilterIssued,sortTitle,sortDateIssued,org.dspace.app.itemmarking.ItemMarkingExtractor.type,org.dspace.app.itemmarking.ItemMarkingExtractor.availability,typeMap,collectionMap,org.dspace.util.MultiFormatDateParser,org.dspace.versioning.VersioningService,org.dspace.authority.AuthoritySearchService,dspace.DSpaceAuthorityIndexer,AuthorityTypes,OrcidSource,org.dspace.app.itemimport.BTEBatchImportService,batchImportTransformationEngine,batchImportLinearWorkflow,org.dspace.submit.lookup.SubmissionLookupService,phase1TransformationEngine,multipleDataLoader,org.dspace.submit.lookup.SubmissionLookupOutputGenerator,phase1LinearWorkflow,mapConverter_arxivSubject,mapConverter_pubstatusPubmed,removeLastDot,phase2Transf ormationEngine,submissionItemDataLoader,phase2linearWorkflow,fieldMergeModifier,valueConcatenationModifier,languageCodeModifier,org.dspace.submit.lookup.DSpaceWorkspaceItemOutputGenerator,bibTeXDataLoader,csvDataLoader,tsvDataLoader,risDataLoader,endnoteDataLoader,oaipmhDataLoader,pubmedOnlineDataLoader,pubmedFileDataLoader,pubmedInputMap,arXivOnlineDataLoader,arXivFileDataLoader,arxivInputMap,crossRefOnlineDataLoader,crossRefFileDataLoader,crossrefInputMap,ciniiOnlineDataLoader,ciniiFileDataLoader,ciniiInputMap,outputMap,claimactionAPI,reviewactionAPI,editactionAPI,finaleditactionAPI,singleuserreviewactionAPI,selectrevieweractionAPI,scorereviewactionAPI,evaluationactionAPI,autoassignactionAPI,noUserSelectionActionAPI,assignoriginalsubmitteractionAPI,reviewaction,editaction,finaleditaction,selectrevieweraction,singleuserreviewaction,scorereviewaction,evaluationaction,claimaction,autoassignAction,noUserSelectionAction,originalSubmitterAssignAction,claimaction_xmlui,reviewaction_xmlui ,editaction_xmlui,finaleditaction_xmlui,selectrevieweraction_xmlui,singleuserreviewaction_xmlui,scorereviewaction_xmlui,org.springframework.context.annotation.ConfigurationClassPostProcessor$ImportAwareBeanPostProcessor#0]; >> root of factory hierarchy >> INFO [org.dspace.services.sessions.SessionRequestServiceImpl] init >> INFO [org.springframework.cache.ehcache.EhCacheManagerFactoryBean] >> Initializing EHCache CacheManager >> INFO [org.dspace.services.caching.CachingServiceImpl] init() >> INFO [org.dspace.services.caching.CachingServiceImpl] Caching service >> initialized: >> ** Memory report >> freeMemory: 21944624 >> totalMemory: 70254592 >> maxMemory: 129761280 >> >> ** Full report of all known caches (0): >> >> WARN [org.dspace.services.email.EmailServiceImpl] Couldn't get an email >> session from environment: Name mail is not bound in this Context >> INFO [org.dspace.services.email.EmailServiceImpl] Initializing an email >> session from configuration. >> INFO >> [org.springframework.beans.factory.support.DefaultListableBeanFactory] >> Pre-instantiating singletons in >> org.springframework.beans.factory.support.DefaultListableBeanFactory@1ca399: >> defining beans >> [org.springframework.context.annotation.internalConfigurationAnnotationProcessor,org.springframework.context.annotation.internalAutowiredAnnotationProcessor,org.springframework.context.annotation.internalRequiredAnnotationProcessor,org.springframework.context.annotation.internalCommonAnnotationProcessor,org.dspace.servicemanager.spring.DSpaceBeanPostProcessor#0,org.dspace.example.Example,org.dspace.app.requestitem.RequestItemAuthorExtractor,org.dspace.app.sherpa.SHERPAService,org.dspace.app.sherpa.submit.SHERPASubmitService,org.dspace.discovery.SearchService,org.dspace.app.sherpa.submit.SHERPASubmitConfigurationService,org.dspace.identifier.IdentifierService,org.dspace.identifier.VersionedHandleIdentifierProvider,org.dspace.services.CachingService,org.dspace.caching.ehcache.CacheManager,org.dspace.services.SessionService,org.dspace.services.EventService,org.dspace.services.email.EmailServiceImpl,solrServiceResourceIndexPlugin,SolrServiceSpellIndexingPlugin,solrBrowseIndexer,org.ds pace.discovery.configuration.DiscoveryConfigurationService,defaultConfiguration,homepageConfiguration,homepageTagCloudFacetConfiguration,defaultTagCloudFacetConfiguration,tagCloudConfiguration,browseTagCloudConfiguration,searchFilterTitle,searchFilterAuthor,searchFilterSubject,searchFilterIssued,sortTitle,sortDateIssued,org.dspace.app.itemmarking.ItemMarkingExtractor.type,org.dspace.app.itemmarking.ItemMarkingExtractor.availability,typeMap,collectionMap,org.dspace.util.MultiFormatDateParser,org.dspace.versioning.VersioningService,org.dspace.authority.AuthoritySearchService,dspace.DSpaceAuthorityIndexer,AuthorityTypes,OrcidSource,org.dspace.app.itemimport.BTEBatchImportService,batchImportTransformationEngine,batchImportLinearWorkflow,org.dspace.submit.lookup.SubmissionLookupService,phase1TransformationEngine,multipleDataLoader,org.dspace.submit.lookup.SubmissionLookupOutputGenerator,phase1LinearWorkflow,mapConverter_arxivSubject,mapConverter_pubstatusPubmed,removeLastDot,phase2Transf ormationEngine,submissionItemDataLoader,phase2linearWorkflow,fieldMergeModifier,valueConcatenationModifier,languageCodeModifier,org.dspace.submit.lookup.DSpaceWorkspaceItemOutputGenerator,bibTeXDataLoader,csvDataLoader,tsvDataLoader,risDataLoader,endnoteDataLoader,oaipmhDataLoader,pubmedOnlineDataLoader,pubmedFileDataLoader,pubmedInputMap,arXivOnlineDataLoader,arXivFileDataLoader,arxivInputMap,crossRefOnlineDataLoader,crossRefFileDataLoader,crossrefInputMap,ciniiOnlineDataLoader,ciniiFileDataLoader,ciniiInputMap,outputMap,claimactionAPI,reviewactionAPI,editactionAPI,finaleditactionAPI,singleuserreviewactionAPI,selectrevieweractionAPI,scorereviewactionAPI,evaluationactionAPI,autoassignactionAPI,noUserSelectionActionAPI,assignoriginalsubmitteractionAPI,reviewaction,editaction,finaleditaction,selectrevieweraction,singleuserreviewaction,scorereviewaction,evaluationaction,claimaction,autoassignAction,noUserSelectionAction,originalSubmitterAssignAction,claimaction_xmlui,reviewaction_xmlui ,editaction_xmlui,finaleditaction_xmlui,selectrevieweraction_xmlui,singleuserreviewaction_xmlui,scorereviewaction_xmlui,org.springframework.context.annotation.ConfigurationClassPostProcessor$ImportAwareBeanPostProcessor#0]; >> root of factory hierarchy >> INFO [org.dspace.servicemanager.spring.SpringServiceManager] Spring >> Service Manager started up in 4210 ms with 111 services... >> INFO [org.dspace.servicemanager.DSpaceKernelImpl] DSpace kernel startup >> completed in 4267 ms and registered as MBean: >> org.dspace:name=d9379481-46ef-4b55-876a-33802c90996f,type=DSpaceKernel >> INFO [org.dspace.core.ConfigurationManager] Loading provided config >> file: >> /dspace/config/dspace.cfg >> INFO [org.dspace.core.ConfigurationManager] Using dspace provided log >> configuration (log.init.config) >> INFO [org.dspace.core.ConfigurationManager] Loading: >> /dspace/config/log4j.properties >> Loading catalog: >> file:/var/lib/tomcat7/work/Catalina/localhost/xmlui/cocoon_xml_resolver_entities/catalog >> Jul 10, 2015 4:42:16 PM org.apache.catalina.startup.HostConfig >> deployDirectory >> INFO: Deploying web application directory /var/lib/tomcat7/webapps/oai >> Jul 10, 2015 4:42:20 PM org.apache.catalina.loader.WebappClassLoader >> validateJarFile >> INFO: >> validateJarFile(/var/lib/tomcat7/webapps/oai/WEB-INF/lib/servlet-api-2.5-20081211.jar) >> - jar not loaded. See Servlet Spec 2.3, section 9.7.2. Offending class: >> javax/servlet/Servlet.class >> INFO: Loading provided config file: /dspace/config/dspace.cfg >> INFO: Using dspace provided log configuration (log.init.config) >> INFO: Loading: /dspace/config/log4j.properties >> SLF4J: Class path contains multiple SLF4J bindings. >> SLF4J: Found binding in >> [jar:file:/var/lib/tomcat7/webapps/oai/WEB-INF/lib/slf4j-jdk14-1.6.1.jar!/org/slf4j/impl/StaticLoggerBinder.class] >> SLF4J: Found binding in >> [jar:file:/var/lib/tomcat7/webapps/oai/WEB-INF/lib/slf4j-log4j12-1.6.1.jar!/org/slf4j/impl/StaticLoggerBinder.class] >> SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for an >> explanation. >> Jul 10, 2015 4:42:21 PM org.dspace.storage.rdbms.DatabaseManager >> initialize >> INFO: DBMS is 'PostgreSQL' >> Jul 10, 2015 4:42:21 PM org.dspace.storage.rdbms.DatabaseManager >> initialize >> INFO: DBMS driver version is '9.1.13' >> Jul 10, 2015 4:42:21 PM >> org.flywaydb.core.internal.util.logging.apachecommons.ApacheCommonsLog >> info >> INFO: Database: jdbc:postgresql://localhost:5432/dspace (PostgreSQL 9.1) >> Jul 10, 2015 4:42:21 PM org.apache.coyote.AbstractProtocol start >> INFO: Starting ProtocolHandler ["http-bio-8080"] >> Jul 10, 2015 4:42:21 PM org.apache.catalina.startup.Catalina start >> INFO: Server startup in 80373 ms >> Exception in thread "http-bio-8080-exec-1" >> Exception: java.lang.OutOfMemoryError thrown from the >> UncaughtExceptionHandler in thread "http-bio-8080-exec-1" >> Exception in thread >> "ContainerBackgroundProcessor[StandardEngine[Catalina]]" >> Exception: java.lang.OutOfMemoryError thrown from the >> UncaughtExceptionHandler in thread >> "ContainerBackgroundProcessor[StandardEngine[Catalina]]" >> >> >> >> -- >> ----------------------------------------------------------------------- >> Dr. Parthasarathi Mukhopadhyay >> Associate Professor, Department of Library and Information Science, >> University of Kalyani, >> Kalyani - 741 235 (WB), India >> ----------------------------------------------------------------------- >> >> >> ------------------------------------------------------------------------------ >> Don't Limit Your Business. Reach for the Cloud. >> GigeNET's Cloud Solutions provide you with the tools and support that >> you need to offload your IT needs and focus on growing your business. >> Configured For All Businesses. Start Your Cloud Today. >> https://www.gigenetcloud.com/ >> _______________________________________________ >> DSpace-tech mailing list >> DSpace-tech@lists.sourceforge.net >> https://lists.sourceforge.net/lists/listinfo/dspace-tech >> List Etiquette: >> https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette >> > -- ----------------------------------------------------------------------- Dr. Parthasarathi Mukhopadhyay Associate Professor, Department of Library and Information Science, University of Kalyani, Kalyani - 741 235 (WB), India ----------------------------------------------------------------------- ------------------------------------------------------------------------------ Don't Limit Your Business. Reach for the Cloud. GigeNET's Cloud Solutions provide you with the tools and support that you need to offload your IT needs and focus on growing your business. Configured For All Businesses. Start Your Cloud Today. https://www.gigenetcloud.com/ _______________________________________________ DSpace-tech mailing list DSpace-tech@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/dspace-tech List Etiquette: https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette
