Hit a different error with pkg-config (a nice easy install =P) $ eb pkg-config-0.27.1-goalf-1.1.0-no-OFED.eb --robot == temporary log file in case of crash /tmp/easybuild-PWQr7X.log == resolving dependencies ... == processing EasyBuild easyconfig /workspace/opt/apps/easybuild/1.2.0/lib/python2.7/site-packages/easybuild_easyconfigs-1.2.0.0-py2.7.egg/easybuild/easyconfigs/g/GCC/GCC-4.6.3.eb == building and installing GCC-4.6.3... == fetching files... == getting ready, creating build dir, resetting environment... == unpacking... ERROR: EasyBuild encountered an exception (at easybuild/1.2.0/lib/python2.7/site-packages/easybuild_framework-1.2.0-py2.7.egg/easybuild/main.py:800 in build_and_install_software): autoBuild Failed (last 300 chars): ild/tools/filetools.py:610 in parse_cmd_output): cmd "tar xzf /h1/aterrel/.local/easybuild/sources/g/GCC/gcc-4.6.3.tar.gz" exited with exitcode 2 and output:
gzip: stdin: unexpected end of file tar: Unexpected EOF in archive tar: Unexpected EOF in archive tar: Error is not recoverable: exiting now On Fri, Mar 22, 2013 at 9:24 PM, Andy Ray Terrel <[email protected]> wrote: > Okay I add the --robot and I get a different error: > > One or more OS dependencies were not found: ['qt4-devel'] > > Trying some other packages out in the meantime. > > -- Andy > > On Fri, Mar 22, 2013 at 9:19 PM, Andy Ray Terrel <[email protected]> > wrote: >> So I just did a symbolic link from lmod to modulecmd. Looks like >> there was some issues. Any ideas? >> >> -- Andy >> >> >> >> $ eb DOLFIN-1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3.eb >> == temporary log file in case of crash /tmp/easybuild-UFxEYV.log >> == resolving dependencies ... >> ERROR: EasyBuild crashed with an error (at >> easybuild/1.2.0/lib/python2.7/site-packages/easybuild_framework-1.2.0-py2.7.egg/easybuild/main.py:514 >> in resolve_dependencies): Dependencies not met. Cannot resolve >> [('SuiteSparse', '3.7.0-goalf-1.1.0-no-OFED-withparmetis'), ('zlib', >> '1.2.7-goalf-1.1.0-no-OFED'), ('UFL', >> '1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Trilinos', >> '10.12.2-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Boost', >> '1.49.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('ParMETIS', >> '4.0.2-goalf-1.1.0-no-OFED'), ('CGAL', >> '4.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Python', >> '2.7.3-goalf-1.1.0-no-OFED'), ('UFC', >> '2.0.5-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Armadillo', >> '2.4.4-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Instant', >> '1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('FFC', >> '1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('goalf', '1.1.0-no-OFED'), >> ('FIAT', '1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Viper', >> '1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('SLEPc', >> '3.3-p1-goalf-1.1.0-no-OFED-Python-2.7.3'), ('SWIG', >> '2.0.4-goalf-1.1.0-no-OFED-Python-2.7.3'), ('CMake', >> '2.8.4-goalf-1.1.0-no-OFED'), ('libxml2', >> '2.8.0-goalf-1.1.0-no-OFED'), ('Sphinx', >> '1.1.3-goalf-1.1.0-no-OFED-Python-2.7.3'), ('MTL4', '4.0.8878'), >> ('PETSc', '3.3-p2-goalf-1.1.0-no-OFED-Python-2.7.3'), ('SCOTCH', >> '5.1.12b_esmumps-goalf-1.1.0-no-OFED')] >> >> >> $ cat /tmp/easybuild-UFxEYV.log >> == 2013-03-22 21:16:02,590 main INFO This is EasyBuild 1.2.0 >> (framework: 1.2.0, easyblocks: 1.2.0) on host sandy.ices.utexas.edu. >> == 2013-03-22 21:16:02,694 main.easybuild_config INFO Logger started >> for easybuild_config. >> == 2013-03-22 21:16:02,696 main.config INFO Extended MODULEPATH with >> module install path used by EasyBuild: >> /h1/aterrel/.local/easybuild/modules/all:/workspace/opt/modulefiles:/opt/apps/ossw/derived_modulefiles/sl6/intel/12.1/modulefiles:/opt/apps/ossw/derived_modulefiles/sl6/modulefiles:/opt/apps/sysnet/modulefiles:/opt/apps/ossw/modulefiles >> == 2013-03-22 21:16:02,732 main INFO Found >> DOLFIN-1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3.eb in >> /workspace/opt/apps/easybuild/1.2.0/lib/python2.7/site-packages/easybuild_easyconfigs-1.2.0.0-py2.7.egg/easybuild/easyconfigs: >> /workspace/opt/apps/easybuild/1.2.0/lib/python2.7/site-packages/easybuild_easyconfigs-1.2.0.0-py2.7.egg/easybuild/easyconfigs/d/DOLFIN/DOLFIN-1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3.eb >> == 2013-03-22 21:16:02,734 main.EasyConfig INFO Obtained list of valid >> module classes: ['base', 'bio', 'chem', 'compiler', 'lib', 'phys', >> 'tools'] >> == 2013-03-22 21:16:02,740 main.EasyConfig INFO setting config option >> toolchain: value {'version': '1.1.0-no-OFED', 'name': 'goalf'} >> == 2013-03-22 21:16:02,741 main.EasyConfig INFO setting config option >> name: value DOLFIN >> == 2013-03-22 21:16:02,741 main.EasyConfig INFO setting config option >> sources: value ['dolfin-1.0.0.tar.gz'] >> == 2013-03-22 21:16:02,742 main.EasyConfig INFO setting config option >> versionsuffix: value -Python-2.7.3 >> == 2013-03-22 21:16:02,742 main.EasyConfig INFO setting config option >> version: value 1.0.0 >> == 2013-03-22 21:16:02,744 main.EasyConfig INFO setting config option >> dependencies: value [('Python', '2.7.3'), ('Boost', '1.49.0', >> '-Python-2.7.3'), ('UFC', '2.0.5', '-Python-2.7.3'), ('SWIG', '2.0.4', >> '-Python-2.7.3'), ('FFC', '1.0.0', '-Python-2.7.3'), ('FIAT', '1.0.0', >> '-Python-2.7.3'), ('Instant', '1.0.0', '-Python-2.7.3'), ('Viper', >> '1.0.0', '-Python-2.7.3'), ('UFL', '1.0.0', '-Python-2.7.3'), >> ('SCOTCH', '5.1.12b_esmumps'), ('Armadillo', '2.4.4', >> '-Python-2.7.3'), ('ParMETIS', '4.0.2'), ('SuiteSparse', '3.7.0', >> '-withparmetis'), ('CGAL', '4.0', '-Python-2.7.3'), ('PETSc', >> '3.3-p2', '-Python-2.7.3'), ('SLEPc', '3.3-p1', '-Python-2.7.3'), >> ('MTL4', '4.0.8878', '', True), ('Trilinos', '10.12.2', >> '-Python-2.7.3'), ('Sphinx', '1.1.3', '-Python-2.7.3'), ('zlib', >> '1.2.7'), ('libxml2', '2.8.0')] >> == 2013-03-22 21:16:02,744 main.EasyConfig INFO setting config option >> source_urls: value >> ['https://launchpad.net/dolfin/1.0.x/1.0.0/+download'] >> == 2013-03-22 21:16:02,745 main.EasyConfig INFO setting config option >> toolchainopts: value {'usempi': True, 'pic': True, >> 'packed-linker-options': False} >> == 2013-03-22 21:16:02,745 main.EasyConfig INFO setting config option >> homepage: value https://launchpad.net/dolfin >> == 2013-03-22 21:16:02,746 main.EasyConfig INFO setting config option >> patches: value ['wl_pkg_linkflags.patch', 'petsc-slepc-libs.patch'] >> == 2013-03-22 21:16:02,746 main.EasyConfig INFO setting config option >> builddependencies: value [('CMake', '2.8.4')] >> == 2013-03-22 21:16:02,747 main.EasyConfig INFO setting config option >> description: value DOLFIN is the C++/Python interface of FEniCS, >> providing a consistent PSE >> (Problem Solving Environment) for ordinary and partial differential >> equations. >> == 2013-03-22 21:16:02,747 main.EasyConfig INFO Validating easy block >> == 2013-03-22 21:16:02,747 main.EasyConfig INFO Checking OS dependencies >> == 2013-03-22 21:16:02,748 main.EasyConfig INFO OS dependencies ok: [] >> == 2013-03-22 21:16:02,748 main.EasyConfig INFO Checking skipsteps >> == 2013-03-22 21:16:02,750 main.search_toolchain INFO Logger started >> for search_toolchain. >> == 2013-03-22 21:16:02,791 main.Goalf INFO _get_optimal_architecture: >> using march=native as optarch for Intel. >> == 2013-03-22 21:16:02,796 main.Modules INFO Logger started for Modules. >> == 2013-03-22 21:16:02,807 main INFO resolving dependencies ... >> == 2013-03-22 21:16:02,808 main.Modules INFO Logger started for Modules. >> == 2013-03-22 21:16:02,818 main WARNING No installed modules. Your >> MODULEPATH is probably incomplete: >> /h1/aterrel/.local/easybuild/modules/all:/workspace/opt/modulefiles:/opt/apps/ossw/derived_modulefiles/sl6/intel/12.1/modulefiles:/opt/apps/ossw/derived_modulefiles/sl6/modulefiles:/opt/apps/sysnet/modulefiles:/opt/apps/ossw/modulefiles >> == 2013-03-22 21:16:02,818 main ERROR EasyBuild crashed with an error >> (at >> easybuild/1.2.0/lib/python2.7/site-packages/easybuild_framework-1.2.0-py2.7.egg/easybuild/main.py:514 >> in resolve_dependencies): Dependencies not met. Cannot resolve >> [('SuiteSparse', '3.7.0-goalf-1.1.0-no-OFED-withparmetis'), ('zlib', >> '1.2.7-goalf-1.1.0-no-OFED'), ('UFL', >> '1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Trilinos', >> '10.12.2-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Boost', >> '1.49.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('ParMETIS', >> '4.0.2-goalf-1.1.0-no-OFED'), ('CGAL', >> '4.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Python', >> '2.7.3-goalf-1.1.0-no-OFED'), ('UFC', >> '2.0.5-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Armadillo', >> '2.4.4-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Instant', >> '1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('FFC', >> '1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('goalf', '1.1.0-no-OFED'), >> ('FIAT', '1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Viper', >> '1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('SLEPc', >> '3.3-p1-goalf-1.1.0-no-OFED-Python-2.7.3'), ('SWIG', >> '2.0.4-goalf-1.1.0-no-OFED-Python-2.7.3'), ('CMake', >> '2.8.4-goalf-1.1.0-no-OFED'), ('libxml2', >> '2.8.0-goalf-1.1.0-no-OFED'), ('Sphinx', >> '1.1.3-goalf-1.1.0-no-OFED-Python-2.7.3'), ('MTL4', '4.0.8878'), >> ('PETSc', '3.3-p2-goalf-1.1.0-no-OFED-Python-2.7.3'), ('SCOTCH', >> '5.1.12b_esmumps-goalf-1.1.0-no-OFED')] >> >> >> On Fri, Mar 22, 2013 at 4:25 PM, Kenneth Hoste <[email protected]> >> wrote: >>> Hi Andy, >>> >>> On 22 Mar 2013, at 22:12, Andy Ray Terrel wrote: >>> >>>> Hello, >>>> >>>> Was support for lmod ever added? My current machine uses it instead >>>> of environment modules. >>> >>> No, unfortunately not yet, see also >>> https://github.com/hpcugent/easybuild-framework/issues/110. >>> >>> However, since lmod is compatible with Tcl modules as used by the >>> environment modules package, it may work with the current EasyBuild >>> codebase... >>> >>> As far as I know, the lmod 'modulecmd' offers the same command line >>> interface as the environment modules one. >>> And lmod can handle Tcl modules, which is what EasyBuild currently produces. >>> >>> Maybe you should just give it a try, and see what happens? >>> >>> In any case, we are still interesting in decent lmod support in EasyBuild, >>> and hope to play around with it soon. >>> >>> We think lmod can help us in our search for a tool to handle the huge set >>> of modules that you can easily obtain using EasyBuild, >>> so it's pretty high on our list of things to look at. >>> >>> If you would be willing/able to help us out there, that would be fantastic. >>> Let me know if you think we should talk about it (e.g., set up a conf call >>> or something). >>> >>> >>> regards, >>> >>> Kenneth >>>
