Hi Yann, A bit of a shot in the dark here, but does this happen to be a CentOS6 machine? If so, I had to set "with_jemalloc = False" and apply the lrt-flag patch https://github.com/easybuilders/easybuild-easyconfigs/pull/6089 (which I hope will make it into the next release? still waiting approval though)
(if i recall correctly, jemalloc was due to the old kernel missing some feature (and disabling jemalloc was the easiest fix), and the -lrt flag was related to some behavior in the linker in combination with Bazel not passing on necessary link flags) Though, I couldn't actually spot any actual error message in the entire log you pasted. Best regards, Mikael On Wed, Apr 25, 2018 at 6:01 PM, Yann Sagon <yann.sa...@unige.ch> wrote: > Dear Kenneth, > > Thanks for the links. I tried with the tf in develop branch, it still > doesn't compile successfuly. > > Here is a full log with debug: > > https://gist.github.com/ysagon/30ecfee7789d6cf8f9304103fcdb539f > > Best > > > 2018-04-25 15:17 GMT+02:00 Kenneth Hoste <kenneth.ho...@ugent.be>: > >> Dear Yann, >> >> This does not show the actual error that occurred, can you provide a >> full (debug) log? >> >> Note that we have an easyconfig for TensorFlow 1.7.0 with foss/2018a as >> well in the develop branch of the repository [1], and there have been >> some small fixes to the TensorFlow easyblock as well [2]. >> >> All this will be included in the upcoming EasyBuild release, due for >> later this week. >> >> >> regards, >> >> Kenneth >> >> [1] >> https://github.com/easybuilders/easybuild-easyconfigs/tree/ >> develop/easybuild/easyconfigs/t/TensorFlow >> [2] >> https://github.com/easybuilders/easybuild-easyblocks/blob/ >> develop/easybuild/easyblocks/t/tensorflow.py >> >> On 25/04/2018 15:12, Yann Sagon wrote: >> > Dear list, >> > >> > I'm very happy to see that TF is now available in eb as compiled from >> > source, not only the whl. >> > >> > Unfortunately, I have an error when trying to build: >> > >> > >> > /opt/ebsofts/Core/GCCcore/6.4.0/bin/gcc -U_FORTIFY_SOURCE >> > -fstack-protector -Wall -B/opt/ebsofts/Core/GCCcore/6.4.0/bin >> > -B/opt/ebsofts/Compiler/GCCcore/6.4.0/binutils/2.28/bin >> > -Wunused-but-set-parameter -Wno-free-nonheap-object >> > -fno-omit-frame-pointer -g0 -O2 '-D_FORTIFY_SOURCE=1' -DNDEBUG >> > -ffunction-sections -fdata-sections >> > -DGEMMLOWP_ALLOW_SLOW_SCALAR_FALLBACK -O2 '-march=core2' -MD -MF >> > bazel-out/k8-py3-opt/bin/external/jpeg/_objs/jpeg/external/jpeg/jcphuff.d >> -iquote >> > external/jpeg -iquote bazel-out/k8-py3-opt/genfiles/external/jpeg >> > -iquote external/bazel_tools -iquote >> > bazel-out/k8-py3-opt/genfiles/external/bazel_tools -isystem >> > external/bazel_tools/tools/cpp/gcc3 -O3 -w >> -fno-canonical-system-headers >> > -Wno-builtin-macro-redefined '-D__DATE__="redacted"' >> > '-D__TIMESTAMP__="redacted"' '-D__TIME__="redacted"' -c >> > external/jpeg/jcphuff.c -o >> > bazel-out/k8-py3-opt/bin/external/jpeg/_objs/jpeg/external/ >> jpeg/jcphuff.o)^M >> > Target //tensorflow/tools/pip_package:build_pip_package failed to build >> > INFO: Elapsed time: 101.289s, Critical Path: 61.90s^M >> > FAILED: Build did NOT complete successfully^M >> > (at easybuild/tools/run.py:481 in parse_cmd_output) >> > >> > I'm not able to say why it's not working. Any clue? >> > >> > Best >> > >> > >
