Dear Loris,
On 15/11/2018 10:39, Loris Bennett wrote:
Hi,
Somehow I goofed up. Although I set EASYBUILD_PREFIX when building
EasyBuild, the software I subsequently built has ended up at the default
location:
$ echo $EASYBUILD_PREFIX
/home/loris/shared
$ ls $EASYBUILD_PREFIX/software
EasyBuild
Was $EASYBUILD_PREFIX set with "export EASYBUILD_PREFIX=..."?
That's crucial, since 'eb' starts a bash subshell, and only environment
variables set via "export" will be passed on to EasyBuild.
You can check you current active configuration using "eb --show-config".
$ ls .local/easybuild/software/
Autoconf Bison FFTW ...
Automake Boost flex ...
Autotools bzip2 fontconfig ...
binutils expat foss ...
However, I have merged the two directory trees together and also rebuilt
one module successfully.
I can see that I could write a script to extract the names of the .eb
files from the other modules and rebuild them, but is there a simpler
way to rebuild all the modules?
The easyconfig files used for each installation are stored in the
installation directory of each software package.
So, this should work:
eb $HOME/.local/easybuild/software/*/*/easybuild*/*.eb --robot
Alternative, you can look into the easyconfigs archive, and use the
easyconfig files from there (see "repositorypath" in the output of "eb
--show-config" for the location).
regards,
Kenneth
Cheers,
Loris
