Dear John,
On 15/11/2018 22:04, Dey, John F wrote:
I’m working on R-devel-2018-11-14-foss-2018b.eb and EB cannot find any
of the source modules.
Couldn't find file Rmpi-0.6-9.tar.gz anywhere, and downloading it didn't
work either...
The correct name is Rmpi_0.6-9.tar.gz
CRAN download format is name underscore version
Easybuild is looking for: name dash version
I did not have this issue when building R-3.5.1 a few months ago.
I have tried with EB 3.7.0 and 3.7.1
Existing R easyconfigs have this:
exts_default_options = {
'source_urls': [
'http://cran.r-project.org/src/contrib/Archive/%(name)s', #
package archive
'http://cran.r-project.org/src/contrib/', # current version of
packages
'http://cran.freestatistics.org/src/contrib', # mirror
alternative for current packages
],
'source_tmpl': '%(name)s_%(version)s.tar.gz',
}
That's what tells EasyBuild where to download each extension from, and
what the default source tarball name is (which is indeed with an
underscore).
Does your R-devel-2018-11-14-foss-2018b.eb easyconfig have this too?
regards,
Kenneth
*John Dey*
*HPC Operations*
SciComp Computing
*O* _206.667.4308_
*M* _360.649.2731_
[email protected] <mailto:[email protected]>
SciComp Office Hours
Wed. 10-noon M4-B102
http://www.fredhutch.org/content/dam/public/email-signatures/3/fred_hutch_logo.png
<http://www.fredhutch.org/>
Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N., Mail Stop J4-402
Seattle, WA 98109
*fredhutch.org <http://www.fredhutch.org/>*