Hello, are you talking about this log file? https://gist.github.com/ysagon/1823752abf05ae675cf5cd17ca3e74cd
This is the log once the build is finished. Best On Fri, May 24, 2019 at 8:01 PM Kenneth Hoste <kenneth.ho...@ugent.be> wrote: > Hi Yann, > > Can you share the full (preferably debug) EasyBuild log thay shows the > issue? > > Maybe the MRtrix build scripts hardcode system locations somewhere? > > > regards, > > Kenneth > > On 24/05/2019 15:39, Alan O'Cais wrote: > > Have you checked the configure output? Does PKG_CONFIG_PATH appear in > > your XZ module file? If so then it should be able to find it in > > PKG_CONFIG_PATH at configure time. If either of those is not the case > > then you probably need Autotools as a builddep of your XZ/MRtrix > > easyconfigs? > > > > On Fri, 24 May 2019 at 15:08, Yann Sagon <yann.sa...@unige.ch > > <mailto:yann.sa...@unige.ch>> wrote: > > > > Dear list, > > > > I'm trying to build MRtrix-3.0_RC3 for foss/2018b on CentOS6 and the > > issue is that it depend on libzma, even if XZ is included as > > dependency in the eb file. > > > > ldd $(which mrinfo) | grep zma > > liblzma.so.0 => /usr/lib64/liblzma.so.0 (0x00002aea556e7000) > > > > Here is the eb file I'm using: > > https://gist.github.com/ysagon/4e1b5f66450a467c0d8ec3765d5b456c > > > > Any clue? > > > > Best > > > > > > -- > > Logo UNIGE Yann Sagon > > Référent HPC > > > > Division du système et des technologies de l'information et de la > > communication > > Université de Genève | 24 rue Général-Dufour > > Tél 022 379 77 37 | Bureau 151 > > > > www.unige.ch/stic <http://www.unige.ch/stic> > > > > > > > > -- > > Dr. Alan O'Cais > > E-CAM Software Manager > > Juelich Supercomputing Centre > > Forschungszentrum Juelich GmbH > > 52425 Juelich, Germany > > > > Phone: +49 2461 61 5213 > > Fax: +49 2461 61 6656 > > E-mail: a.oc...@fz-juelich.de <mailto:a.oc...@fz-juelich.de> > > WWW: http://www.fz-juelich.de/ias/jsc/EN > > > > > > > ------------------------------------------------------------------------------------------------ > > > ------------------------------------------------------------------------------------------------ > > Forschungszentrum Juelich GmbH > > 52425 Juelich > > Sitz der Gesellschaft: Juelich > > Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 > > Vorsitzender des Aufsichtsrats: MinDir Volker Rieke > > Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), > > Karsten Beneke (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt, > > Prof. Dr. Sebastian M. Schmidt > > > ------------------------------------------------------------------------------------------------ > > > ------------------------------------------------------------------------------------------------ > > > -- [image: Logo UNIGE] Yann Sagon Référent HPC Division du système et des technologies de l'information et de la communication Université de Genève | 24 rue Général-Dufour Tél 022 379 77 37 | Bureau 151 www.unige.ch/stic
