Thank you for your reply. I succeeded to install the module by setting: sanity_pip_check = False
But I don't know if this can cause misbehaviour to the package ... Bests quim Missatge de Yann Sagon <yann.sa...@unige.ch> del dia dl., 18 d’oct. 2021 a les 14:32: > Hi, > > I had the same issue for another Python bundle (and I was using --robot) > > == restore after iterating... > == postprocessing... > == sanity checking... > == ... (took 11 secs) > == FAILED: Installation ended unsuccessfully (build directory: > /dev/shm/ebbuild/Spyder/4.1.5/foss-2020a-Python-3.8.2): build failed (first > 300 chars): `pip check` failed: > spyder 4.1.5 requires intervaltree, which is not installed. > > The reason is probably that some python packages updated their > dependencies and the eb should be update as well. > > Best > > Yann > > > Le 18.10.2021 à 13:46, Strube, Alexandre a écrit : > > Hola Joaquim, > > dependencies are dealt with --robot setting - which should bring the right > ones. > > In any case, you can always install h5py beforehand yourself. > > On 18. Oct 2021, at 12:26, Joaquim Jornet Somoza < > j.jornet.som...@gmail.com> wrote: > > Dear easybuilders, > > I am trying to install Biopython-1.78-intel-2020a-Python-3.8.2.eb, but > after the installation and > postprocessing, the sanity check step fails. > > I have found this error that I don't know how to avoid: > > == 2021-10-18 12:21:38,634 build_log.py:169 ERROR EasyBuild crashed with > an error (at > easybuild/common/software/EasyBuild/4.4.1/lib/python2.7/site-packages/easybuild/base/exceptions.py:124 > in __init__): `pip check` failed: > yaff 1.4.2 requires h5py, which is not installed. > > Could anyone help me? > > > Best regards > quim > > -- > > ---------------------------------------------------------------------------------------------------------------------------------------- > *Dr. Joaquim Jornet Somoza* > *Técnico Superior de Cálculo Científico * > Servicios Generales a la Investigación (*SGIker*) > Universidad del País Vasco (*UPV/EHU*) > email: j.jornet.som...@gmail.com > Edificio Joxe Maria Korta (Campus Gipuzkoa) > Av. Tolosa 72, 4a planta > 20018 Donostia-San Sebastián, > Gipuzkoa, Spain > > *External Collaborator.* > Nano-Bio Spectroscopy group > Departamento de Física de Materiales > Universidad del País Vasco (UPV/EHU) > Donostia-San Sebastián, Gipuzkoa, Spain > > The Max Planck Institute for the Structure and Dynamics of Matter (MPSD) > Bldg. 99 (CFEL) > Luruper Chaussee 149 > 22761 Hamburg, Germany > > > -- > > [image: Logo UNIGE] Yann Sagon > Référent HPC > > Division du système et des technologies de l'information et de la > communication > Université de Genève | 24 rue Général-Dufour > Tél 022 379 77 37 | Bureau 151 > > www.unige.ch/stic > -- ---------------------------------------------------------------------------------------------------------------------------------------- *Dr. Joaquim Jornet Somoza* *Técnico Superior de Cálculo Científico * Servicios Generales a la Investigación (*SGIker*) Universidad del País Vasco (*UPV/EHU*) email: joaquim.jor...@ehu.eus Edificio Joxe Maria Korta (Campus Gipuzkoa) Av. Tolosa 72, 4a planta 20018 Donostia-San Sebastián, Gipuzkoa, Spain w: http://www.ehu.es/sgi/ tw: @izosgi fb: izosgi
