Hi Arnau
I'm new to easybuild, could you tell me how to grep into the
easyconfig tree? (an example would be appreciated)
Thnaks
Quoting Arnau <[email protected]>:
Hi,
Seems like you have two versions of ncurses in the build.
I would say that one package is puting a different version of ncurses into
the build. You need to find it, a dry run or greping into the easyconfig
tree, can point out who the culprit is and then update its dependencies.
HTH
El dv., 8 d’ag. 2025, 15:29, <[email protected]> va escriure:
Hi
I have a weird issue that happens from time to time involving ncurses
(modules conflict), when installing some packages; the bypass I found
is adding --skip-sanity-check to the package.
Can somebody help me to fix this issue for good? I'm not comfortable
to skip the sanity check every time I got the error.
e.g.
eb --robot git-2.41.0-GCCcore-12.3.0-nodocs.eb
== 2025-08-05 12:01:39,770 run.py:601 INFO Shell command completed
successfully (see output above): file
/encs/pkg/EasyBuild/root/software/git/2.41.0-GCCcore-12.3.0-nodocs/bin/git-cvsserver
== 2025-08-05 12:01:39,770 run.py:489 INFO Path to bash that will be
used to run shell commands: /encs/bin/bash
== 2025-08-05 12:01:39,770 run.py:500 INFO Running shell command 'file
/encs/pkg/EasyBuild/root/software/git/2.41.0-GCCcore-12.3.0-nodocs/bin/gitk'
in /disk/nobackup/git/2.41.0/GCCcore-12.3.0-nodocs/git-2.41.0
== 2025-08-05 12:01:39,787 run.py:598 INFO Output of 'file ...' shell
command (stdout + stderr):
/encs/pkg/EasyBuild/root/software/git/2.41.0-GCCcore-12.3.0-nodocs/bin/gitk:
POSIX shell script, UTF-8 Unicode text executable
== 2025-08-05 12:01:39,787 run.py:601 INFO Shell command completed
successfully (see output above): file
/encs/pkg/EasyBuild/root/software/git/2.41.0-GCCcore-12.3.0-nodocs/bin/gitk
== 2025-08-05 12:01:39,791 build_log.py:226 ERROR EasyBuild
encountered an error (at easybuild/tools/build_log.py:166 in
caller_info): Sanity check failed: loading fake module failed:
"ncurses/6.3(30):ERROR:150: Module 'ncurses/6.3' conflicts with the
currently loaded module(s) 'ncurses/6.4'" (at
easybuild/framework/easyblock.py:4358 in _sanity_check_step)
eb GObject-Introspection-1.76.1-GCCcore-12.3.0.eb --robot
== 2025-08-06 09:07:40,679 run.py:601 INFO Shell command completed
successfully (see output above): file
/encs/pkg/EasyBuild/root/software/GObject-Introspection/1.76.1-GCCcore-12.3.0/lib64/
libgirepository-1.0.so
== 2025-08-06 09:07:40,683 build_log.py:226 ERROR EasyBuild
encountered an error (at easybuild/tools/build_log.py:166 in
caller_info): Sanity check failed: loading fake module failed:
"ncurses/6.3(30):ERROR:150: Module 'ncurses/6.3' conflicts with the
currently loaded module(s) 'ncurses/6.4'" (at
easybuild/framework/easyblock.py:4358 in _sanity_check_step)
eb --robot Qt5-5.15.10-GCCcore-12.3.0.eb
* [FAILED] Compiler/GCCcore/12.3.0/Qt5/5.15.10
ERROR: Installation of Qt5-5.15.10-GCCcore-12.3.0.eb failed:
"ncurses/6.4(30):ERROR:150: Module 'ncurses/6.4' conflicts with the
currently loaded module(s) 'ncurses/6.3'"
Those are some examples, it happens with some packages.
This is EasyBuild 5.1.0 (framework: 5.1.0, easyblocks: 5.1.0)
setenv EASYBUILD_MODULE_NAMING_SCHEME "HierarchicalMNS"
OS: Alma 9.6
Thanks
--
-----------------------------------------------------------------------
Carlos Alarcon Meza [email protected]
Systems Administrator AITS Research Support & HPC
Gina Cody School of Engineering & Computer Science Concordia University
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--
-----------------------------------------------------------------------
Carlos Alarcon Meza [email protected]
Systems Administrator AITS Research Support & HPC
Gina Cody School of Engineering & Computer Science Concordia University
-----------------------------------------------------------------------
