Hi All

I am a master’s student and I have a statistical question.  I have an 
experiment evaluating the 
effects of intertidal elevation (fixed; 3 levels) and seaweed canopy cover 
(fixed; 2 levels) on species 
richness. Quadrats are randomly distributed across 5 sites (random factor) with 
4 replicates in 
each elevation and canopy treatment combination per site; therefore, I am using 
a nested model.  
The model is described by Underwood in his Experiments in Ecology textbook 
(1997, page 367) 
and is:
                                                                  df            
Mean square denominator
Intertidal Zone                                    2            S(I*C)
Canopy Cover                                       1            S(I*C)
Intertidal zone * Canopy cover             2            S(I*C)
Site (Intertidal zone * Canopy Cover)  24               Error
Error                                                      90

The usual procedure is to run this “main effects” model and, when there is a 
significant interaction 
term, to run simple effects at each level of A) intertidal zone and B) canopy 
cover using this model 
(as an example for each level of intertidal elevation):

                                                df              Mean square 
denominator
Canopy Cover                    1               S(C)
Site(Canopy)                             8              Error           
Error                                   90

Essentially, my data shows significance in the main model for Intertidal zone 
(p = 0.0019), 
Canopy cover (p = 0.0034) and for the nested site term (p < 0.0001), but there 
is no significance 
in the interaction term (p = 0.6978).  Regardless of this non-significant 
interaction term, I still ran 
simple effects, for each intertidal elevation separately, and found 
significance in the canopy 
treatment at two of the intertidal elevations (p = 0.0013 and p = 0.0003), with 
no significant 
difference occurring in the third elevation (p = 0.4842).  Does anyone know why 
I may be getting 
a non-significant interaction term even when canopy effects depend on the level 
of elevation 
being considered?       
Any advice would be greatly appreciated
Thanks
Cortney Watt

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