Steve wrote:

I'm in a rush but I think you want to start by looking at this paper:

Lorch, R. F., & Myers, J. L. (1990). Regression analyses of repeated
measures data in cognitive research. Journal of Experimental Psychology:
Learning, Memory and Cognition, 16, 149-157.

It deals with non-orthogonal repeated measures regression and describes
how to run appropriate analyses in SPSS or other standard packages. It
won't copw with all problems (e.g., FWIR if you have missing cells a
multilevel model might be a better route).

Thom
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