Hi Anand,
You can run shuffleseq 5 times, with one shuffle (the default) and give
a different output filename each time.
shuffleseq input.fasta output1.fasta
and so on...
Hope that helps
Peter Rice
EMBOSS Team
On 28/11/2018 03:57, Anandkumar Surendrarao wrote:
Greetings!
If I have a multifasta file - lets say input.fasta with 5 chromosomal
sequences,
and I want to shuffle the entire genome 5 times,
how can I redirect each of the 5 shuffled genomes to a
different filename - output1.fasta, ... output5.fasta?
Currently, my syntax redirects all 5 shuffled versions to the same
output filename, which is not optimal. Any suggestions?
Thanks a bunch.
- Anand
_____
*Anandk*umar *S*urendra*rao*, PhD
+1.530.574.5134
+91.91760.70887
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