Yes, I found that one. But thanks for validating it :)

That the stream is not closed is a bug, but has anyone actually tested
that this solves the problem? There might be other not-closed streams,
so I do not want to mark the bug as CLOSED before I know we have found
them all.

Regards


On Wed, 2010-09-01 at 09:54 +0200, Nishen Naidoo wrote:
> Hi guys,
> 
> I think this should be a quick/easy fix - 
> 
> adding:
>          fis.close()
> 
> to line 75
> of 
> /fcrepo-security-jaas/src/main/java/org/fcrepo/server/security/jaas/util/DataUtils.java
>  
> 
> should resolve the issue.
> 
> Thanks,
> Nish
> 
> 
>                                    
> ______________________________________________________________________
> 
> Nishen Naidoo
> IT Projects Developer
> Library IT
> MACQUARIE UNIVERSITY NSW 2109
> 
> E-Mail: [email protected]
> Phone:  +61 2 98506553
> Mobile: +61 4 30006783
> Fax:    +61 2 98507912
> http://www.library.mq.edu.au/
> 
> CRICOS Provider No 00002J
> 
> This message is intended for the addressee named and may contain
> confidential information. If you are not the intended recipient,
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> message are those of the individual sender, and are not necessarily
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> 
> Please consider the environment before printing this email.
> 
> 
> 
> 
> On 1 September 2010 09:23, Janna Wemekamp <[email protected]>
> wrote:
>         Steve, Chris:
>         
>         Thanks for the quick response!
>         Yes, a re-install setting FeSL AuthN to false solves the
>         problem. (We're not yet using any authorization so it's not an
>         issue for us at the moment.)
>         
>         Btw, thanks also for the improvements to the web search
>         interface; I particularly like the addition of the 'view
>         content' links on the 'List Datastreams' page. Makes it that
>         much quicker to look at the content. 
>         
>         The FC committers have put in an enormous amount of work in
>         this release! Kudos to all!!
>         
>         Thanks again.
>         
>         
>         Janna
>         
>         
>         
>         On 31/08/2010 18:57, Steve Bayliss wrote: 
>         > Hi Janna, Chris
>         >  
>         > I've not had chance to reproduce this, but looking at the
>         > messages this would seem to be related to FeSL AuthN/jass
>         > rather than Akubra.  Probably the fedora-users.xml file (or
>         > a FileInputStream) is not being closed by the new
>         > authentication code.  (A candidate would actually seem to be
>         > DataUtils.loadFile).
>         >  
>         > Janna - would it be possible to revert back to the old
>         > authentication mechanism - ie choose not to install FeSL
>         > AuthN (the default is "yes") when installing and see if you
>         > still have this problem?
>         >  
>         > Thanks
>         > Steve
>         >         -----Original Message-----
>         >         From: Janna Wemekamp
>         >         [mailto:[email protected]] 
>         >         Sent: 31 August 2010 05:33
>         >         To: Chris Wilper
>         >         Cc: Fedora Users
>         >         Subject: Re: [fcrepo-user] FedoraCommons 3.4 with
>         >         Akubra Low-Level Storage: Java crash in REST API's
>         >         getNextPID
>         >         
>         >         
>         >         Hi Chris,
>         >         
>         >         No, there are no calls to any other REST API
>         >         methods. My Perl application builds a collection of
>         >         FOXML files calling getNextPID for each one. There
>         >         are no ingests happening during this process - only
>         >         calls to getNextPID. 
>         >         
>         >         I've just reproduced the sequence again, to be sure.
>         >             (1) Clear out my 'default' namespace from the
>         >         PIDGEN table (PostgreSQL)
>         >             (2) Start Fedora Commons (using
>         >         $FEDORA_HOME/tomcat/bin/startup.sh)
>         >             (3) run my Perl script until it fails
>         >             (4) Check the PIDGEN table to see how many PIDs
>         >         were allocated - 878
>         >         
>         >         Here's the section of fedora.log:
>         >         
>         >         INFO 2010-08-31 14:00:24.141 [main] (Server)
>         >         Starting up server                 
>         >         INFO 2010-08-31 14:00:24.239 [main] (Server) Server
>         >         home
>         >         is /opt/fedoracommons/nrm/3.4/dev/server                    
>                                            
>         >         INFO 2010-08-31 14:00:24.259 [main] (BasicServer)
>         >         Fedora Version: 3.4
>         >         INFO 2010-08-31 14:00:24.259 [main] (BasicServer)
>         >         Fedora Build Date: 2010-08-20 09:56:09 UTC+0100
>         >         INFO 2010-08-31 14:00:24.259 [main] (BasicServer)
>         >         Fedora Build Number: 8768     
>         >         INFO 2010-08-31 14:00:24.262 [main] (Server)
>         >         Initializing
>         >         org.fcrepo.server.storage.DefaultDOManager  
>         >         ...
>         >         INFO 2010-08-31 14:00:27.013 [main] (Server)
>         >         Post-Initializing
>         >         org.fcrepo.server.management.BasicPIDGenerator
>         >         INFO 2010-08-31 14:00:27.019 [main] (Server) Server
>         >         startup complete
>         >         INFO 2010-08-31 14:01:11.517 [TP-Processor3]
>         >         (DefaultManagement) Completed getNextPID(numPIDs: 1,
>         >         namespace: null)
>         >         INFO 2010-08-31 14:01:11.580 [TP-Processor3]
>         >         (DefaultManagement) Completed getNextPID(numPIDs: 1,
>         >         namespace: null)
>         >         INFO 2010-08-31 14:01:11.602 [TP-Processor3]
>         >         (DefaultManagement) Completed getNextPID(numPIDs: 1,
>         >         namespace: null)
>         >         ...
>         >         INFO 2010-08-31 14:01:30.203 [TP-Processor3]
>         >         (DefaultManagement) Completed getNextPID(numPIDs: 1,
>         >         namespace: null)
>         >         INFO 2010-08-31 14:01:30.222 [TP-Processor3]
>         >         (DefaultManagement) Completed getNextPID(numPIDs: 1,
>         >         namespace: null)
>         >         ERROR 2010-08-31 14:01:30.238 [TP-Processor3]
>         >         (XmlUsersFileModule) 
> /opt/fedoracommons/nrm/3.4/dev/server/config/fedora-users.xml (Too many open 
> files)
>         >         
>         >         There were no other REST API or other FC operations
>         >         in the sequence.
>         >         I'd guess you could reproduce it simply by calling
>         >         getNextPID in a loop. The failure point might be
>         >         OS-dependent, though.
>         >         
>         >         Thanks.
>         >         
>         >         
>         >         Janna
>         >         
>         >         
>         >         
>         >         On 31/08/2010 13:14, Chris Wilper wrote: 
>         >         > Hi Janna,
>         >         > 
>         >         > The "too many open files" error is troubling.  I'd like 
> to try to
>         >         > reproduce it.  I noticed in your log snippet there are two
>         >         > back-to-back calls to getNextPID().  Can you describe the 
> sequence of
>         >         > calls you're making to the REST API in more detail?  Are 
> these *all*
>         >         > calls to that method, or are there calls in between which 
> attempt to
>         >         > ingest the objects?  If so, about how many getNextPID 
> calls are you
>         >         > making between each ingest request?  Are there any other 
> REST API
>         >         > calls in between?
>         >         > 
>         >         > Thanks,
>         >         > Chris
>         >         > 
>         >         > On Mon, Aug 30, 2010 at 8:40 PM, Janna Wemekamp
>         >         > <[email protected]> wrote:
>         >         > > I'm experimenting with the latest Fedora Commons 3.4 
> release and its Akubra
>         >         > > Low-Level Storage module.
>         >         > > I'm building the FOXML files using a custom Perl 
> application which calls the
>         >         > > REST API's getNextPID to obtain the PID for each object.
>         >         > > After 754 calls, Java crashes!
>         >         > > Note -  there were no other processes accessing this FC 
> instance.
>         >         > > 
>         >         > > The next getNextPID request returned:  HTTP Response 
> status: 503 Service
>         >         > > Temporarily Unavailable
>         >         > > 
>         >         > > Fedora log:
>         >         > > 
>         >         > > INFO 2010-08-31 09:56:29.683 [TP-Processor3] 
> (DefaultManagement) Completed
>         >         > > getNextPID(numPIDs: 1, namespace: null)
>         >         > > INFO 2010-08-31 09:56:29.723 [TP-Processor3] 
> (DefaultManagement) Completed
>         >         > > getNextPID(numPIDs: 1, namespace: null)
>         >         > > ERROR 2010-08-31 09:56:29.759 [TP-Processor3] 
> (XmlUsersFileModule)
>         >         > > 
> /opt/fedoracommons/nrm/3.4/dev/server/config/fedora-users.xml (Too many open
>         >         > > files)
>         >         > > 
>         >         > > >From the Tomcat log (catalina.out):
>         >         > > 
>         >         > > #
>         >         > > # A fatal error has been detected by the Java Runtime 
> Environment:
>         >         > > #
>         >         > > #  Internal Error (exceptions.cpp:367), pid=25754, 
> tid=1117292864
>         >         > > #  Error: ExceptionMark destructor expects no pending 
> exceptions
>         >         > > #
>         >         > > # JRE version: 6.0_21-b06
>         >         > > # Java VM: Java HotSpot(TM) 64-Bit Server VM (17.0-b16 
> mixed mode
>         >         > > linux-amd64 )
>         >         > > # Can not save log file, dump to screen..
>         >         > > #
>         >         > > # A fatal error has been detected by the Java Runtime 
> Environment:
>         >         > > #
>         >         > > #  Internal Error (exceptions.cpp:367), pid=25754, 
> tid=1117292864
>         >         > > #  Error: ExceptionMark destructor expects no pending 
> exceptions
>         >         > > #
>         >         > > # JRE version: 6.0_21-b06
>         >         > > # Java VM: Java HotSpot(TM) 64-Bit Server VM (17.0-b16 
> mixed mode
>         >         > > linux-amd64 )
>         >         > > # If you would like to submit a bug report, please 
> visit:
>         >         > > #   http://java.sun.com/webapps/bugreport/crash.jsp
>         >         > > #
>         >         > > 
>         >         > > ---------------  T H R E A D  ---------------
>         >         > > 
>         >         > > Current thread (0x00002aab3c00c000):  JavaThread 
> "TP-Processor3" daemon
>         >         > > [_thread_in_vm, id=25816, 
> stack(0x0000000042888000,0x0000000042989000)]
>         >         > > 
>         >         > > Stack: [0x0000000042888000,0x0000000042989000],  
> sp=0x0000000042983e00,
>         >         > > free space=3ef0000000000000018k
>         >         > > Native frames: (J=compiled Java code, j=interpreted, 
> Vv=VM code, C=native
>         >         > > code)
>         >         > > V  [libjvm.so+0x730610]
>         >         > > V  [libjvm.so+0x2f2ff6]
>         >         > > V  [libjvm.so+0x342d3d]
>         >         > > V  [libjvm.so+0x2870d8]
>         >         > > V  [libjvm.so+0x286722]
>         >         > > V  [libjvm.so+0x2867a6]
>         >         > > V  [libjvm.so+0x2881b6]
>         >         > > V  [libjvm.so+0x6c1abf]
>         >         > > V  [libjvm.so+0x6bfc4b]
>         >         > > V  [libjvm.so+0x6beae1]
>         >         > > V  [libjvm.so+0x6beb10]
>         >         > > V  [libjvm.so+0x45326b]
>         >         > > 
>         >         > > Java frames: (J=compiled Java code, j=interpreted, 
> Vv=VM code)
>         >         > > j
>         >         > > 
> java.lang.ClassLoader.findBootstrapClass(Ljava/lang/String;)Ljava/lang/Class;+0
>         >         > > J  
> java.lang.ClassLoader.loadClass(Ljava/lang/String;Z)Ljava/lang/Class;
>         >         > > J  
> java.lang.ClassLoader.loadClass(Ljava/lang/String;Z)Ljava/lang/Class;
>         >         > > j
>         >         > > 
> sun.misc.Launcher$AppClassLoader.loadClass(Ljava/lang/String;Z)Ljava/lang/Class;+41
>         >         > > J  
> java.lang.ClassLoader.loadClass(Ljava/lang/String;)Ljava/lang/Class;
>         >         > > j
>         >         > > 
> java.util.ResourceBundle$RBClassLoader.loadClass(Ljava/lang/String;)Ljava/lang/Class;+10
>         >         > > j
>         >         > > 
> java.util.ResourceBundle$Control.newBundle(Ljava/lang/String;Ljava/util/Locale;Ljava/lang/String;Ljava/lang/ClassLoader;Z)Ljava/util/ResourceBundle;+24
>         >         > > j
>         >         > > 
> java.util.ResourceBundle.loadBundle(Ljava/util/ResourceBundle$CacheKey;Ljava/util/List;Ljava/util/ResourceBundle$Control;Z)Ljava/util/ResourceBundle;+54
>         >         > > j
>         >         > > 
> java.util.ResourceBundle.findBundle(Ljava/util/ResourceBundle$CacheKey;Ljava/util/List;Ljava/util/List;ILjava/util/ResourceBundle$Control;Ljava/util/ResourceBundle;)Ljava/util/ResourceBundle;+213
>         >         > > j
>         >         > > 
> java.util.ResourceBundle.findBundle(Ljava/util/ResourceBundle$CacheKey;Ljava/util/List;Ljava/util/List;ILjava/util/ResourceBundle$Control;Ljava/util/ResourceBundle;)Ljava/util/ResourceBundle;+37
>         >         > > j
>         >         > > 
> java.util.ResourceBundle.getBundleImpl(Ljava/lang/String;Ljava/util/Locale;Ljava/lang/ClassLoader;Ljava/util/ResourceBundle$Control;)Ljava/util/ResourceBundle;+187
>         >         > > j
>         >         > > 
> java.util.ResourceBundle.getBundle(Ljava/lang/String;)Ljava/util/ResourceBundle;+10
>         >         > > j  
> sun.security.util.ResourcesMgr$1.run()Ljava/lang/Object;+2
>         >         > > v  ~StubRoutines::call_stub
>         >         > > J
>         >         > > 
> java.security.AccessController.doPrivileged(Ljava/security/PrivilegedAction;)Ljava/lang/Object;
>         >         > > j
>         >         > > 
> sun.security.util.ResourcesMgr.getString(Ljava/lang/String;)Ljava/lang/String;+13
>         >         > > j  
> javax.security.auth.login.LoginContext.invoke(Ljava/lang/String;)V+1075
>         >         > > j
>         >         > > 
> javax.security.auth.login.LoginContext.access$000(Ljavax/security/auth/login/LoginContext;Ljava/lang/String;)V+2
>         >         > > j  
> javax.security.auth.login.LoginContext$4.run()Ljava/lang/Object;+8
>         >         > > v  ~StubRoutines::call_stub
>         >         > > j
>         >         > > 
> java.security.AccessController.doPrivileged(Ljava/security/PrivilegedExceptionAction;)Ljava/lang/Object;+0
>         >         > > j  
> javax.security.auth.login.LoginContext.invokePriv(Ljava/lang/String;)V+9
>         >         > > j  javax.security.auth.login.LoginContext.login()V+48
>         >         > > j
>         >         > > 
> org.fcrepo.server.security.jaas.AuthFilterJAAS.authenticate(Ljavax/servlet/http/HttpServletRequest;)Ljavax/security/auth/Subject;+197
>         >         > > j
>         >         > > 
> org.fcrepo.server.security.jaas.AuthFilterJAAS.doFilter(Ljavax/servlet/ServletRequest;Ljavax/servlet/ServletResponse;Ljavax/servlet/FilterChain;)V+290
>         >         > > j
>         >         > > 
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(Ljavax/servlet/ServletRequest;Ljavax/servlet/ServletResponse;)V+119
>         >         > > j
>         >         > > 
> org.apache.catalina.core.ApplicationFilterChain.doFilter(Ljavax/servlet/ServletRequest;Ljavax/servlet/ServletResponse;)V+101
>         >         > > j
>         >         > > 
> org.apache.catalina.core.StandardWrapperValve.invoke(Lorg/apache/catalina/connector/Request;Lorg/apache/catalina/connector/Response;)V+804
>         >         > > j
>         >         > > 
> org.apache.catalina.core.StandardContextValve.invoke(Lorg/apache/catalina/connector/Request;Lorg/apache/catalina/connector/Response;)V+365
>         >         > > j
>         >         > > 
> org.apache.catalina.authenticator.AuthenticatorBase.invoke(Lorg/apache/catalina/connector/Request;Lorg/apache/catalina/connector/Response;)V+675
>         >         > > j
>         >         > > 
> org.apache.catalina.core.StandardHostValve.invoke(Lorg/apache/catalina/connector/Request;Lorg/apache/catalina/connector/Response;)V+64
>         >         > > j
>         >         > > 
> org.apache.catalina.valves.ErrorReportValve.invoke(Lorg/apache/catalina/connector/Request;Lorg/apache/catalina/connector/Response;)V+6
>         >         > > j
>         >         > > 
> org.apache.catalina.core.StandardEngineValve.invoke(Lorg/apache/catalina/connector/Request;Lorg/apache/catalina/connector/Response;)V+42
>         >         > > j
>         >         > > 
> org.apache.catalina.connector.CoyoteAdapter.service(Lorg/apache/coyote/Request;Lorg/apache/coyote/Response;)V+157
>         >         > > j
>         >         > > 
> org.apache.jk.server.JkCoyoteHandler.invoke(Lorg/apache/jk/core/Msg;Lorg/apache/jk/core/MsgContext;)I+123
>         >         > > j
>         >         > > 
> org.apache.jk.common.HandlerRequest.invoke(Lorg/apache/jk/core/Msg;Lorg/apache/jk/core/MsgContext;)I+374
>         >         > > j
>         >         > > 
> org.apache.jk.common.ChannelSocket.invoke(Lorg/apache/jk/core/Msg;Lorg/apache/jk/core/MsgContext;)I+191
>         >         > > j
>         >         > > 
> org.apache.jk.common.ChannelSocket.processConnection(Lorg/apache/jk/core/MsgContext;)V+105
>         >         > > j
>         >         > > 
> org.apache.jk.common.ChannelSocket$SocketConnection.runIt([Ljava/lang/Object;)V+8
>         >         > > j  
> org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run()V+167
>         >         > > j  java.lang.Thread.run()V+11
>         >         > > v  ~StubRoutines::call_stub
>         >         > > 
>         >         > > ---------------  P R O C E S S  ---------------
>         >         > > 
>         >         > > Java Threads: ( => current thread )
>         >         > >   0x0000000049889800 JavaThread "pool-1-thread-3" 
> [_thread_blocked,
>         >         > > id=26176, stack(0x0000000043292000,0x0000000043393000)]
>         >         > >   0x0000000049d2d800 JavaThread "TP-Processor12" daemon 
> [_thread_in_native,
>         >         > > id=25907, stack(0x0000000043191000,0x0000000043292000)]
>         >         > >   0x00000000497ab000 JavaThread "TP-Processor11" daemon 
> [_thread_in_native,
>         >         > > id=25906, stack(0x0000000043090000,0x0000000043191000)]
>         >         > >   0x00000000497aa800 JavaThread "TP-Processor10" daemon 
> [_thread_blocked,
>         >         > > id=25905, stack(0x0000000042f8f000,0x0000000043090000)]
>         >         > >   0x000000004971d000 JavaThread "TP-Processor9" daemon 
> [_thread_blocked,
>         >         > > id=25904, stack(0x00000000406d5000,0x00000000407d6000)]
>         >         > >   0x00000000497af800 JavaThread "TP-Processor8" daemon 
> [_thread_in_native,
>         >         > > id=25836, stack(0x0000000042e8e000,0x0000000042f8f000)]
>         >         > >   0x00000000497ae800 JavaThread "TP-Processor7" daemon 
> [_thread_in_native,
>         >         > > id=25835, stack(0x0000000042d8d000,0x0000000042e8e000)]
>         >         > >   0x000000004a22f800 JavaThread "TP-Processor6" daemon 
> [_thread_in_native,
>         >         > > id=25834, stack(0x0000000042c8c000,0x0000000042d8d000)]
>         >         > >   0x000000004a0a6800 JavaThread "TP-Processor5" daemon 
> [_thread_in_native,
>         >         > > id=25833, stack(0x0000000042b8b000,0x0000000042c8c000)]
>         >         > >   0x00002aab3c014000 JavaThread "TP-Monitor" daemon 
> [_thread_blocked,
>         >         > > id=25818, stack(0x0000000042a8a000,0x0000000042b8b000)]
>         >         > >   0x00002aab3c012800 JavaThread "TP-Processor4" daemon 
> [_thread_in_native,
>         >         > > id=25817, stack(0x0000000042989000,0x0000000042a8a000)]
>         >         > > =>0x00002aab3c00c000 JavaThread "TP-Processor3" daemon 
> [_thread_in_vm,
>         >         > > id=25816, stack(0x0000000042888000,0x0000000042989000)]
>         >         > >   0x00002aab3c00b000 JavaThread "TP-Processor2" daemon 
> [_thread_in_native,
>         >         > > id=25815, stack(0x0000000042787000,0x0000000042888000)]
>         >         > >   0x00002aab3c011000 JavaThread "TP-Processor1" daemon 
> [_thread_in_native,
>         >         > > id=25814, stack(0x0000000042686000,0x0000000042787000)]
>         >         > >   0x00002aab3c006000 JavaThread "http-8080-Acceptor-0" 
> daemon
>         >         > > [_thread_in_native, id=25813, 
> stack(0x00000000403ff000,0x0000000040500000)]
>         >         > >   0x00002aab3c005800 JavaThread
>         >         > > 
> "ContainerBackgroundProcessor[StandardEngine[Catalina]]" daemon
>         >         > > [_thread_blocked, id=25812, 
> stack(0x00000000402fe000,0x00000000403ff000)]
>         >         > >   0x0000000049b80800 JavaThread "pool-4-thread-1" 
> [_thread_blocked,
>         >         > > id=25811, stack(0x00000000401fd000,0x00000000402fe000)]
>         >         > >   0x0000000049c52800 JavaThread "pool-2-thread-1" 
> [_thread_blocked,
>         >         > > id=25810, stack(0x000000004095b000,0x0000000040a5c000)]
>         >         > >   0x00002aab310f6000 JavaThread "Thread-4" 
> [_thread_blocked, id=25809,
>         >         > > stack(0x0000000042585000,0x0000000042686000)]
>         >         > >   0x00002aab3028c000 JavaThread "Thread-3" 
> [_thread_blocked, id=25808,
>         >         > > stack(0x0000000042484000,0x0000000042585000)]
>         >         > >   0x00002aab3081d000 JavaThread "Write-lock Reaper" 
> daemon [_thread_blocked,
>         >         > > id=25806, stack(0x000000004085a000,0x000000004095b000)]
>         >         > >   0x00002aab3125c800 JavaThread "TripleWriteThread:
>         >         > > 
> /data/fedoracommons/nrm/3.4/dev/resourceIndex/xaStatementStore/xa.g_3201"
>         >         > > daemon [_thread_blocked, id=25805,
>         >         > > stack(0x0000000041518000,0x0000000041619000)]
>         >         > >   0x00002aab311b5800 JavaThread "TripleWriteThread:
>         >         > > 
> /data/fedoracommons/nrm/3.4/dev/resourceIndex/xaStatementStore/xa.g_3120"
>         >         > > daemon [_thread_blocked, id=25804,
>         >         > > stack(0x0000000042383000,0x0000000042484000)]
>         >         > >   0x00002aab310fb000 JavaThread "TripleWriteThread:
>         >         > > 
> /data/fedoracommons/nrm/3.4/dev/resourceIndex/xaStatementStore/xa.g_3012"
>         >         > > daemon [_thread_blocked, id=25803,
>         >         > > stack(0x0000000041417000,0x0000000041518000)]
>         >         > >   0x00002aab30626000 JavaThread "JotmClock" daemon 
> [_thread_blocked,
>         >         > > id=25802, stack(0x00000000417f7000,0x00000000418f8000)]
>         >         > >   0x00002aab30393800 JavaThread "JotmBatch" daemon 
> [_thread_blocked,
>         >         > > id=25801, stack(0x00000000416f6000,0x00000000417f7000)]
>         >         > >   0x00002aab30398800 JavaThread "GC Daemon" daemon 
> [_thread_blocked,
>         >         > > id=25800, stack(0x00000000411f5000,0x00000000412f6000)]
>         >         > >   0x00002aab30941800 JavaThread "RMI Reaper" 
> [_thread_blocked, id=25799,
>         >         > > stack(0x00000000410f4000,0x00000000411f5000)]
>         >         > >   0x00002aab310b2800 JavaThread "RMI TCP Accept-0" 
> daemon
>         >         > > [_thread_in_native, id=25798, 
> stack(0x0000000040ff3000,0x00000000410f4000)]
>         >         > >   0x0000000049f9a800 JavaThread "Thread-1" 
> [_thread_blocked, id=25771,
>         >         > > stack(0x00000000419cb000,0x0000000041acc000)]
>         >         > >   0x0000000049611800 JavaThread "Low Memory Detector" 
> daemon
>         >         > > [_thread_blocked, id=25766, 
> stack(0x0000000042181000,0x0000000042282000)]
>         >         > >   0x000000004960f000 JavaThread "CompilerThread1" 
> daemon [_thread_blocked,
>         >         > > id=25765, stack(0x0000000042080000,0x0000000042181000)]
>         >         > >   0x0000000049609800 JavaThread "CompilerThread0" 
> daemon [_thread_blocked,
>         >         > > id=25764, stack(0x0000000041f7f000,0x0000000042080000)]
>         >         > >   0x0000000049607800 JavaThread "Signal Dispatcher" 
> daemon [_thread_blocked,
>         >         > > id=25763, stack(0x0000000041e7e000,0x0000000041f7f000)]
>         >         > >   0x00000000495e3000 JavaThread "Finalizer" daemon 
> [_thread_blocked,
>         >         > > id=25762, stack(0x0000000040ef2000,0x0000000040ff3000)]
>         >         > >   0x00000000495e1000 JavaThread "Reference Handler" 
> daemon [_thread_blocked,
>         >         > > id=25761, stack(0x0000000040d8f000,0x0000000040e90000)]
>         >         > >   0x000000004957f800 JavaThread "main" 
> [_thread_in_native, id=25755,
>         >         > > stack(0x0000000040ad3000,0x0000000040bd4000)]
>         >         > > 
>         >         > > Other Threads:
>         >         > >   0x00000000495dc800 VMThread [stack: 
> 0x0000000040c8e000,0x0000000040d8f000]
>         >         > > [id=25760]
>         >         > >   0x000000004961c000 WatcherThread [stack:
>         >         > > 0x0000000042282000,0x0000000042383000] [id=25767]
>         >         > > 
>         >         > > VM state:not at safepoint (normal execution)
>         >         > > 
>         >         > > VM Mutex/Monitor currently owned by a thread: None
>         >         > > 
>         >         > > Heap
>         >         > >  PSYoungGen      total 221120K, used 88016K 
> [0x00002aab01f80000,
>         >         > > 0x00002aab112b0000, 0x00002aab29420000)
>         >         > >   eden space 218752K, 39% used
>         >         > > 
> [0x00002aab01f80000,0x00002aab07328308,0x00002aab0f520000)
>         >         > >   from space 2368K, 99% used
>         >         > > 
> [0x00002aab11060000,0x00002aab112ac078,0x00002aab112b0000)
>         >         > >   to   space 12480K, 0% used
>         >         > > 
> [0x00002aab0fa50000,0x00002aab0fa50000,0x00002aab10680000)
>         >         > >  PSOldGen        total 80512K, used 22495K 
> [0x00002aaab3620000,
>         >         > > 0x00002aaab84c0000, 0x00002aab01f80000)
>         >         > >   object space 80512K, 27% used
>         >         > > 
> [0x00002aaab3620000,0x00002aaab4c17e00,0x00002aaab84c0000)
>         >         > >  PSPermGen       total 64768K, used 64672K 
> [0x00002aaaae220000,
>         >         > > 0x00002aaab2160000, 0x00002aaab3620000)
>         >         > >   object space 64768K, 99% used
>         >         > > 
> [0x00002aaaae220000,0x00002aaab2148300,0x00002aaab2160000)
>         >         > > 
>         >         > > Dynamic libraries:
>         >         > > Can not get library information for pid = 25816
>         >         > > 
>         >         > > VM Arguments:
>         >         > > jvm_args:
>         >         > > 
> -Djava.util.logging.config.file=/opt/fedoracommons/nrm/3.4/dev/tomcat/conf/logging.properties
>         >         > > -Dsolr.solr.home=/opt/fedoracommons/nrm/3.4/dev/solr
>         >         > > 
> -Djava.util.logging.manager=org.apache.juli.ClassLoaderLogManager
>         >         > > 
> -Djava.endorsed.dirs=/opt/fedoracommons/nrm/3.4/dev/tomcat/endorsed
>         >         > > -Dcatalina.base=/opt/fedoracommons/nrm/3.4/dev/tomcat
>         >         > > -Dcatalina.home=/opt/fedoracommons/nrm/3.4/dev/tomcat
>         >         > > 
> -Djava.io.tmpdir=/opt/fedoracommons/nrm/3.4/dev/tomcat/temp
>         >         > > java_command: org.apache.catalina.startup.Bootstrap 
> start
>         >         > > Launcher Type: SUN_STANDARD
>         >         > > 
>         >         > > Environment Variables:
>         >         > > JAVA_HOME=/usr/lib/jvm/jre
>         >         > > 
> PATH=/opt/fedoracommons/nrm/3.4/dev/server/bin:/opt/fedoracommons/nrm/3.4/dev/client/bin:/opt/fedoracommons/nrm/3.4/dev/tomcat/bin:/opt/ant/bin:/usr/lib/jvm/jre/bin:/opt/openoffice.org3/program:/opt/ruby/1.8.7/bin:/opt/perl/5.10.0/bin:/opt/CollabNet_Subversion/bin:/usr/lib64/qt-3.3/bin:/usr/kerberos/bin:/usr/local/bin:/bin:/usr/bin:/home/fedora/bin
>         >         > > 
> LD_LIBRARY_PATH=/usr/lib/jvm/java-1.6.0-sun-1.6.0.21.x86_64/jre/lib/amd64/server:/usr/lib/jvm/java-1.6.0-sun-1.6.0.21.x86_64/jre/lib/amd64:/usr/lib/jvm/java-1.6.0-sun-1.6.0.21.x86_64/jre/../lib/amd64
>         >         > > SHELL=/bin/bash
>         >         > > DISPLAY=192.168.198.102:0
>         >         > > 
>         >         > > Signal Handlers:
>         >         > > SIGSEGV: [libjvm.so+0x7311c0], sa_mask[0]=0x7ffbfeff, 
> sa_flags=0x10000004
>         >         > > SIGBUS: [libjvm.so+0x7311c0], sa_mask[0]=0x7ffbfeff, 
> sa_flags=0x10000004
>         >         > > SIGFPE: [libjvm.so+0x5f5da0], sa_mask[0]=0x7ffbfeff, 
> sa_flags=0x10000004
>         >         > > SIGPIPE: [libjvm.so+0x5f5da0], sa_mask[0]=0x7ffbfeff, 
> sa_flags=0x10000004
>         >         > > SIGXFSZ: [libjvm.so+0x5f5da0], sa_mask[0]=0x7ffbfeff, 
> sa_flags=0x10000004
>         >         > > SIGILL: [libjvm.so+0x5f5da0], sa_mask[0]=0x7ffbfeff, 
> sa_flags=0x10000004
>         >         > > SIGUSR1: SIG_DFL, sa_mask[0]=0x00000000, 
> sa_flags=0x00000000
>         >         > > SIGUSR2: [libjvm.so+0x5f85c0], sa_mask[0]=0x00000000, 
> sa_flags=0x10000004
>         >         > > SIGHUP: [libjvm.so+0x5f8310], sa_mask[0]=0x7ffbfeff, 
> sa_flags=0x10000004
>         >         > > SIGINT: SIG_IGN, sa_mask[0]=0x00000000, 
> sa_flags=0x00000000
>         >         > > SIGTERM: [libjvm.so+0x5f8310], sa_mask[0]=0x7ffbfeff, 
> sa_flags=0x10000004
>         >         > > SIGQUIT: [libjvm.so+0x5f8310], sa_mask[0]=0x7ffbfeff, 
> sa_flags=0x10000004
>         >         > > 
>         >         > > 
>         >         > > ---------------  S Y S T E M  ---------------
>         >         > > 
>         >         > > OS:Linux
>         >         > > uname:Linux 2.6.18-194.8.1.el5xen #1 SMP Wed Jun 23 
> 11:01:41 EDT 2010 x86_64
>         >         > > libc:glibc 2.5 NPTL 2.5
>         >         > > rlimit: STACK 10240k, CORE 0k, NPROC 60404, NOFILE 
> 1024, AS infinity
>         >         > > load average:0.00 0.00 0.00
>         >         > > 
>         >         > > CPU:total 4 (4 cores per cpu, 1 threads per core) 
> family 6 model 23 stepping
>         >         > > 7, cmov, cx8, fxsr, mmx, sse, sse2, sse3, ssse3, sse4.1
>         >         > > 
>         >         > > Memory: 4k page, physical 7724032k(20328k free), swap 
> 16771820k(16771496k
>         >         > > free)
>         >         > > 
>         >         > > vm_info: Java HotSpot(TM) 64-Bit Server VM (17.0-b16) 
> for linux-amd64 JRE
>         >         > > (1.6.0_21-b06), built on Jun 22 2010 01:10:00 by 
> "java_re" with gcc 3.2.2
>         >         > > (SuSE Linux)
>         >         > > 
>         >         > > time: Tue Aug 31 09:56:29 2010
>         >         > > elapsed time: 1381 seconds
>         >         > > 
>         >         > > #
>         >         > > # If you would like to submit a bug report, please 
> visit:
>         >         > > #   http://java.sun.com/webapps/bugreport/crash.jsp
>         >         > > #
>         >         > > 
>         >         > > Any ideas?
>         >         > > 
>         >         > > TIA!
>         >         > > 
>         >         > > 
>         >         > > - Janna Wemekamp
>         >         > > - Toldark Pty Limited
>         >         > > 
>         >         > > 
>         >         > > 
>         >         > > 
>         >         > > 
>         >         > > 
>         >         > > 
>         >         > > 
> ------------------------------------------------------------------------------
>         >         > > This SF.net Dev2Dev email is sponsored by:
>         >         > > 
>         >         > > Show off your parallel programming skills.
>         >         > > Enter the Intel(R) Threading Challenge 2010.
>         >         > > http://p.sf.net/sfu/intel-thread-sfd
>         >         > > _______________________________________________
>         >         > > Fedora-commons-users mailing list
>         >         > > [email protected]
>         >         > > 
> https://lists.sourceforge.net/lists/listinfo/fedora-commons-users
>         >         > > 
>         >         > > 
>         
>         
> ------------------------------------------------------------------------------
>         This SF.net Dev2Dev email is sponsored by:
>         
>         Show off your parallel programming skills.
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> 



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