Thanks very much.

Richard.

On 13 Jul 2010, at 15:12, Alexander Hansen wrote:

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> On 7/12/10 2:55 PM, Richard Reeve wrote:
>> Hi,
>> 
>> clustalx and clustalx-mac both fail to compile because they say that some 
>> file was generated with too old a version of moc (from qt) - 4.5.0 whereas 
>> we're now on 4.6.2. I reproduce the exact errors below:
>> 
>> clustalx
>> --------
>>> c++ -c -pipe -O2 -Wall -W -D__USE_WS_X11__ -DOS_UNIX -DQT_NO_DEBUG 
>>> -DQT_XML_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED 
>>> -I../../../../lib/qt4-x11/mkspecs/darwin-g++42 -I. 
>>> -I../../../../lib/qt4-x11/include/QtCore 
>>> -I../../../../lib/qt4-x11/include/QtGui 
>>> -I../../../../lib/qt4-x11/include/QtXml -I../../../../lib/qt4-x11/include 
>>> -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment 
>>> -IclustalW -I. -o moc_AlignmentFormatOptions.o 
>>> moc_AlignmentFormatOptions.cpp
>>> moc_AlignmentFormatOptions.cpp:14:2: error: #error "This file was generated 
>>> using the moc from 4.5.0. It"
>>> moc_AlignmentFormatOptions.cpp:15:2: error: #error "cannot be used with the 
>>> include files from this version of Qt."
>>> moc_AlignmentFormatOptions.cpp:16:2: error: #error "(The moc has changed 
>>> too much.)"
>>> make: *** [moc_AlignmentFormatOptions.o] Error 1
>>> ### execution of /sw/lib/qt4-x11/bin/qmake failed, exit code 2
>>> Removing runtime build-lock...
>>> Removing build-lock package...
>>> /sw/bin/dpkg-lockwait -r fink-buildlock-clustalx-2.0.12-1002
>>> (Reading database ... 114490 files and directories currently installed.)
>>> Removing fink-buildlock-clustalx-2.0.12-1002 ...
>>> Failed: phase compiling: clustalx-2.0.12-1002 failed
>> 
>> clustalx-mac
>> ------------
>>> g++-4.2 -c -pipe -O2 -arch i386 -Wall -W -DOS_UNIX -DOS_MAC -DQT_NO_DEBUG 
>>> -DQT_XML_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED 
>>> -I../../../../lib/qt4-mac/mkspecs/macx-g++42 -I. 
>>> -I../../../../lib/qt4-mac/lib/QtCore.framework/Versions/4/Headers 
>>> -I../../../../lib/qt4-mac/include/QtCore 
>>> -I../../../../lib/qt4-mac/lib/QtGui.framework/Versions/4/Headers 
>>> -I../../../../lib/qt4-mac/include/QtGui 
>>> -I../../../../lib/qt4-mac/lib/QtXml.framework/Versions/4/Headers 
>>> -I../../../../lib/qt4-mac/include/QtXml -I../../../../lib/qt4-mac/include 
>>> -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment 
>>> -IclustalW -I. -F/sw/lib/qt4-mac/lib -o moc_AlignmentFormatOptions.o 
>>> moc_AlignmentFormatOptions.cpp
>>> moc_AlignmentFormatOptions.cpp:14:2: error: #error "This file was generated 
>>> using the moc from 4.5.0. It"
>>> moc_AlignmentFormatOptions.cpp:15:2: error: #error "cannot be used with the 
>>> include files from this version of Qt."
>>> moc_AlignmentFormatOptions.cpp:16:2: error: #error "(The moc has changed 
>>> too much.)"
>>> make: *** [moc_AlignmentFormatOptions.o] Error 1
>>> ### execution of /sw/lib/qt4-mac/bin/qmake failed, exit code 2
>>> Removing runtime build-lock...
>>> Removing build-lock package...
>>> /sw/bin/dpkg-lockwait -r fink-buildlock-clustalx-mac-2.0.12-1003
>>> (Reading database ... 114490 files and directories currently installed.)
>>> Removing fink-buildlock-clustalx-mac-2.0.12-1003 ...
>>> Failed: phase compiling: clustalx-mac-2.0.12-1003 failed
>>> 
>> 
>> I have followed the instructions for updating fink and other packages, and 
>> they have had no effect (and I wouldn't expect them to given the error). I 
>> don't suppose there's any obvious fix to this?
>> 
>> Cheers,
>> 
>> Richard.
>> 
>> 
> 
> There wasn't a user-level fix, but a fix has just been made in CVS, and
> should propagate to your mirror in less than an hour (no change in
> revision was made).
> 
> - -- 
> Alexander Hansen
> Fink User Liaison
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