Hi,
After a fink update, rasmol rebuild, and I get the following error:
gcc -o rasmol -Os -Wall -Wpointer-arith -no-cpp-precomp -L/usr/X11/
lib rasmol.o molecule.o abstree.o cmndline.o command.o
transfor.o render.o repres.o pixutils.o outfile.o
script.o infile.o tokens.o cif_fract.o cif.o cif_ctonum.o
cif_stx.o multiple.o vector.o wbrotate.o langsel_unix.o maps.o
x11win.o -lm -lXi -lXext -lX11 ../external_packages/
CBFlib-0.8.1/lib/libcbf.a
../external_packages/CQRlib-1.0.3/
cqrlib.o ../external_packages/CVector-1.0.3/CVector.o
../
external_packages/NearTree-2.1.3/CNearTree.o
ld warning: in ../external_packages/CVector-1.0.3/CVector.o, file is
not of required architecture
Undefined symbols:
"_CVectorCreate", referenced from:
_CreateSurfaceBonds in molecule.o
_CreateSurfaceBonds in molecule.o
_ApplyMapShow in command.o
_CNearTreeInsert in CNearTree.o
_CNearTreeInsert in CNearTree.o
_CNearTreeInsert in CNearTree.o
_CNearTreeImmediateInsert in CNearTree.o
_CNearTreeImmediateInsert in CNearTree.o
_CNearTreeFindFarthest in CNearTree.o
_CNearTreeNearest in CNearTree.o
_CNearTreeFindInSphere in CNearTree.o
_CNearTreeFindTreeInSphere in CNearTree.o
_CNearTreeFindTreeInSphere in CNearTree.o
_CNearTreeFindOutSphere in CNearTree.o
_CNearTreeFindTreeOutSphere in CNearTree.o
_CNearTreeFindTreeOutSphere in CNearTree.o
_CNearTreeFindInAnnulus in CNearTree.o
_CNearTreeFindTreeInAnnulus in CNearTree.o
_CNearTreeFindTreeInAnnulus in CNearTree.o
_CNearTreeFindKNearest in CNearTree.o
_CNearTreeFindKNearest in CNearTree.o
_CNearTreeFindKNearest in CNearTree.o
_CNearTreeFindKTreeNearest in CNearTree.o
_CNearTreeFindKTreeNearest in CNearTree.o
_CNearTreeFindKFarthest in CNearTree.o
_CNearTreeFindKFarthest in CNearTree.o
_CNearTreeFindKFarthest in CNearTree.o
_CNearTreeFindKTreeFarthest in CNearTree.o
_CNearTreeFindKTreeFarthest in CNearTree.o
"_CVectorClear", referenced from:
_CNearTreeFindInSphere in CNearTree.o
_CNearTreeFindInSphere in CNearTree.o
_CNearTreeFindOutSphere in CNearTree.o
_CNearTreeFindOutSphere in CNearTree.o
_CNearTreeFindInAnnulus in CNearTree.o
_CNearTreeFindInAnnulus in CNearTree.o
_CNearTreeFindKNearest in CNearTree.o
_CNearTreeFindKNearest in CNearTree.o
_CNearTreeFindKFarthest in CNearTree.o
_CNearTreeFindKFarthest in CNearTree.o
"_CVectorSetSize", referenced from:
_CNearTreeCompleteDelayedInsert in CNearTree.o
_CNearTreeCompleteDelayedInsert in CNearTree.o
"_CVectorSetFlags", referenced from:
_CNearTreeSortIn in CNearTree.o
_CNearTreeSortIn in CNearTree.o
_CNearTreeSortIn in CNearTree.o
_CNearTreeSortIn in CNearTree.o
"_CVectorGetElement", referenced from:
_CNearTreeCompleteDelayedInsert in CNearTree.o
_CNearTreeCompleteDelayedInsert in CNearTree.o
_CNearTreeFindFarthest in CNearTree.o
_CNearTreeNearest in CNearTree.o
_CNearTreeFindInSphere in CNearTree.o
_CNearTreeFindOutSphere in CNearTree.o
_CNearTreeFindInAnnulus in CNearTree.o
_CNearTreeFindKNearest in CNearTree.o
_CNearTreeFindKNearest in CNearTree.o
_CNearTreeFindKNearest in CNearTree.o
_CNearTreeFindKNearest in CNearTree.o
_CNearTreeFindKFarthest in CNearTree.o
_CNearTreeFindKFarthest in CNearTree.o
_CNearTreeFindKFarthest in CNearTree.o
_CNearTreeFindKFarthest in CNearTree.o
"_CVectorAddElement", referenced from:
_CNearTreeInsert in CNearTree.o
_CNearTreeInsert in CNearTree.o
_CNearTreeInsert in CNearTree.o
_CNearTreeImmediateInsert in CNearTree.o
_CNearTreeImmediateInsert in CNearTree.o
_CNearTreeFindFarthest in CNearTree.o
_CNearTreeNearest in CNearTree.o
_CNearTreeFindInSphere in CNearTree.o
_CNearTreeFindInSphere in CNearTree.o
_CNearTreeFindInSphere in CNearTree.o
_CNearTreeFindInSphere in CNearTree.o
_CNearTreeFindInSphere in CNearTree.o
_CNearTreeFindOutSphere in CNearTree.o
_CNearTreeFindOutSphere in CNearTree.o
_CNearTreeFindOutSphere in CNearTree.o
_CNearTreeFindOutSphere in CNearTree.o
_CNearTreeFindOutSphere in CNearTree.o
_CNearTreeFindInAnnulus in CNearTree.o
_CNearTreeFindInAnnulus in CNearTree.o
_CNearTreeFindInAnnulus in CNearTree.o
_CNearTreeFindInAnnulus in CNearTree.o
_CNearTreeFindInAnnulus in CNearTree.o
_CNearTreeSortIn in CNearTree.o
_CNearTreeSortIn in CNearTree.o
_CNearTreeSortIn in CNearTree.o
_CNearTreeFindKNearest in CNearTree.o
_CNearTreeFindKNearest in CNearTree.o
_CNearTreeFindKNearest in CNearTree.o
_CNearTreeFindKFarthest in CNearTree.o
_CNearTreeFindKFarthest in CNearTree.o
_CNearTreeFindKFarthest in CNearTree.o
"_CVectorRemoveElement", referenced from:
_CNearTreeFindFarthest in CNearTree.o
_CNearTreeNearest in CNearTree.o
_CNearTreeFindInSphere in CNearTree.o
_CNearTreeFindOutSphere in CNearTree.o
_CNearTreeFindInAnnulus in CNearTree.o
_CNearTreeFindKNearest in CNearTree.o
_CNearTreeFindKFarthest in CNearTree.o
"_CVectorGetElementptr", referenced from:
_CNearTreeSortIn in CNearTree.o
_CNearTreeSortIn in CNearTree.o
"_CVectorFree", referenced from:
_CreateSurfaceBonds in molecule.o
_CreateSurfaceBonds in molecule.o
_ApplyMapShow in command.o
_CNearTreeFree in CNearTree.o
_CNearTreeFree in CNearTree.o
_CNearTreeFree in CNearTree.o
_CNearTreeClear in CNearTree.o
_CNearTreeClear in CNearTree.o
_CNearTreeClear in CNearTree.o
_CNearTreeCompleteDelayedInsert in CNearTree.o
_CNearTreeFindFarthest in CNearTree.o
_CNearTreeNearest in CNearTree.o
_CNearTreeFindInSphere in CNearTree.o
_CNearTreeFindTreeInSphere in CNearTree.o
_CNearTreeFindTreeInSphere in CNearTree.o
_CNearTreeFindOutSphere in CNearTree.o
_CNearTreeFindTreeOutSphere in CNearTree.o
_CNearTreeFindTreeOutSphere in CNearTree.o
_CNearTreeFindInAnnulus in CNearTree.o
_CNearTreeFindTreeInAnnulus in CNearTree.o
_CNearTreeFindTreeInAnnulus in CNearTree.o
_CNearTreeFindKNearest in CNearTree.o
_CNearTreeFindKNearest in CNearTree.o
_CNearTreeFindKNearest in CNearTree.o
_CNearTreeFindKTreeNearest in CNearTree.o
_CNearTreeFindKTreeNearest in CNearTree.o
_CNearTreeFindKFarthest in CNearTree.o
_CNearTreeFindKFarthest in CNearTree.o
_CNearTreeFindKFarthest in CNearTree.o
_CNearTreeFindKTreeFarthest in CNearTree.o
_CNearTreeFindKTreeFarthest in CNearTree.o
"_CVectorSetElement", referenced from:
_CNearTreeCompleteDelayedInsert in CNearTree.o
ld: symbol(s) not found
collect2: ld returned 1 exit status
### execution of /var/tmp/tmp.0.atulC6 failed, exit code 2
### execution of /var/tmp/tmp.8.YGbnsq failed, exit code 2
make: *** [rasmol] Error 1
Removing runtime build-lock...
Removing build-lock package...
/sw/bin/dpkg-lockwait -r fink-buildlock-rasmol-2.7.5-3
(Reading database ... 145753 files and directories currently installed.)
Removing fink-buildlock-rasmol-2.7.5-3 ...
Failed: phase compiling: rasmol-2.7.5-3 failed
My system:
Package manager version: 0.29.99.cvs
Distribution version: selfupdate-cvs Sun Apr 18 21:08:33 2010, 10.5,
powerpc
Thanks,
- Koen.
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