Hi,
My sw_vers matches yours, as does gcc -v. My uname -a looks a
little different b/c I'm not running virtualbox. Mine says Darwin Kernel
Version 10.6.0.
I noticed that your build log shows -march=i386, where mine shows
core2. Do you know what processor you have? (Apple-menu: About this
Mac.) I can't seem to find the library that's supposed to contain this
symbol...
Fang
> Hi,
> The OS is run via virtualbox on a 64bit system giving it 1,904MB ram and
> 1CPU.
> The outputs are below.
> sw_vers:
> ProductName: Mac OS X
> ProductVersion: 10.6.6
> BuildVersion: 10J567
>
> gcc -v:
> Using built-in specs.
> Target: i686-apple-darwin10
> Configured with: /var/tmp/gcc/gcc-5664~89/src/configure --disable-checking
> --enable-werror --prefix=/usr --mandir=/usr/share/man
> --enable-languages=c,objc,c++,obj-c++
> --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ --with-slibdir=/usr/lib
> --build=i686-apple-darwin10 --with-gxx-include-dir=/usr/include/c++/4.2.1
> --host=i686-apple-darwin10 --target=i686-apple-darwin10
> Thread model: posix
> gcc version 4.2.1 (Apple Inc. build 5664)
>
> uname -a:
> Darwin Wastrel-iTabletPC.local 10.5.0 Darwin Kernel Version 10.5.0: Fri Nov
> 26 20:52:27 EST 2010; legacy kernel v5 :xnu-1504.9.17/BUILD/obj/RELEASE_I386
> i386
>
>
> On Thu, Feb 24, 2011 at 6:39 PM, David Fang <f...@csl.cornell.edu> wrote:
>
>> Hi,
>> That's rather odd. Can you output for me:
>>
>> % sw_vers % gcc -v
>> % uname -a
>>
>> And what kind of machine you're running?
>>
>> Fang
>>
>> Hello,
>>> I have been trying to install coot but fink would fail at the gmp
>>> package. I then used a binary install which seemed to work, but coot
>>> itself
>>> still doesn't get past the splash screen. When I ran fink update the same
>>> fail with the gmp (this time gmp5 instead of 4) came up. I'm fairly new
>>> to
>>> macs and definitely fink and not sure where to proceed as I could not find
>>> anything online about this.
>>> -akos
>>> The install and error are below:
>>>
>>> Making check in cxx
>>> make t-assign t-binary t-cast t-constr t-headers t-istream t-locale
>>> t-misc
>>> t-ops t-ostream t-prec t-rand t-ternary t-unary
>>> g++ -DHAVE_CONFIG_H -I. -I../.. -I../.. -I../../tests -fexceptions
>>>
>>> -I/sw/include -m32 -O2 -pedantic -fomit-frame-pointer -mtune=i386
>>> -march=i386 -c -o t-assign.o t-assign.cc
>>> /bin/sh ../../libtool --tag=CXX --mode=link g++ -m32 -O2 -pedantic
>>> -fomit-frame-pointer -mtune=i386 -march=i386 -L/sw/lib -o t-assign
>>> t-assign.o -L../../.libs ../../tests/libtests.la ../../libgmpxx.la ../../
>>> libgmp.la
>>> libtool: link: g++ -m32 -O2 -pedantic -fomit-frame-pointer -mtune=i386
>>> -march=i386 -o .libs/t-assign t-assign.o
>>> -L/sw/src/fink.build/gmp5-5.0.1-5/gmp-5.0.1/.libs -L/sw/lib
>>> ../../tests/.libs/libtests.a ../../.libs/libgmpxx.dylib
>>> /sw/src/fink.build/gmp5-5.0.1-5/gmp-5.0.1/.libs/libgmp.dylib
>>> ../../.libs/libgmp.dylib
>>> Undefined symbols:
>>> "___sync_fetch_and_add_4", referenced from:
>>> check_mpq() in t-assign.o
>>> check_mpq() in t-assign.o
>>> check_mpq() in t-assign.o
>>> check_mpq() in t-assign.o
>>> check_mpq() in t-assign.o
>>> check_mpq() in t-assign.o
>>> check_mpq() in t-assign.o
>>> check_mpq() in t-assign.o
>>> check_mpq() in t-assign.o
>>> check_mpq() in t-assign.o
>>> check_mpq() in t-assign.o
>>> check_mpf() in t-assign.o
>>> check_mpf() in t-assign.o
>>> check_mpf() in t-assign.o
>>> check_mpf() in t-assign.o
>>> check_mpf() in t-assign.o
>>> check_mpf() in t-assign.o
>>> check_mpf() in t-assign.o
>>> check_mpf() in t-assign.o
>>> check_mpf() in t-assign.o
>>> check_mpf() in t-assign.o
>>> check_mpf() in t-assign.o
>>> check_mpz() in t-assign.o
>>> check_mpz() in t-assign.o
>>> check_mpz() in t-assign.o
>>> check_mpz() in t-assign.o
>>> check_mpz() in t-assign.o
>>> check_mpz() in t-assign.o
>>> check_mpz() in t-assign.o
>>> check_mpz() in t-assign.o
>>> check_mpz() in t-assign.o
>>> check_mpz() in t-assign.o
>>> check_mpz() in t-assign.o
>>> ld: symbol(s) not found
>>> collect2: ld returned 1 exit status
>>> make[4]: *** [t-assign] Error 1
>>> make[3]: *** [check-am] Error 2
>>> make[2]: *** [check-recursive] Error 1
>>> make[1]: *** [check-recursive] Error 1
>>> make: *** [check] Error 2
>>> ### execution of /var/tmp/tmp.1.hx3xI1 failed, exit code 2
>>> Removing runtime build-lock...
>>> Removing build-lock package...
>>> /sw/bin/dpkg-lockwait -r fink-buildlock-gmp5-5.0.1-5
>>> (Reading database ... 46186 files and directories currently installed.)
>>> Removing fink-buildlock-gmp5-5.0.1-5 ...
>>> Failed: phase compiling: gmp5-5.0.1-5 failed
>>>
>>> Before reporting any errors, please run "fink selfupdate" and
>>> try again. If you continue to have issues, please check to see if the
>>> FAQ on fink's website solves the problem. If not, ask on the fink-users
>>> or fink-beginners mailing lists, with a carbon copy to the maintainer:
>>>
>>> David Fang <fang...@users.sourceforge.net>
>>>
>>> Note that this is preferable to emailing the maintainer directly, since
>>> most fink package maintainers do not have access to all possible
>>> hardware and software configurations.
>>>
>>>
>> David Fang
>> http://www.csl.cornell.edu/~fang/
>> http://www.achronix.com/
>>
>>
>
David Fang
http://www.csl.cornell.edu/~fang/
http://www.achronix.com/
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