Hi, I'm having a problem building ncbitools on Leopard 10.5.1.
$ fink install ncbitools Password: Information about 6408 packages read in 0 seconds. The following package will be installed or updated: ncbitools Setting runtime build-lock... dpkg-deb -b /sw/src/fink.build/root-fink-buildlock-ncbitools-2.2.6-1003 /sw/src/fink.build dpkg-deb: building package `fink-buildlock-ncbitools-2.2.6-1003' in `/sw/src/fink.build/fink-buildlock-ncbitools-2.2.6-1003_2008.01.16-23.15.09_darwin-i386.deb'. Installing build-lock package... /sw/bin/dpkg-lockwait -i /sw/src/fink.build/fink-buildlock-ncbitools-2.2.6-1003_2008.01.16-23.15.09_darwin-i386.deb Selecting previously deselected package fink-buildlock-ncbitools-2.2.6-1003. (Reading database ... 42699 files and directories currently installed.) Unpacking fink-buildlock-ncbitools-2.2.6-1003 (from .../fink-buildlock-ncbitools-2.2.6-1003_2008.01.16-23.15.09_darwin-i386.deb) ... Setting up fink-buildlock-ncbitools-2.2.6-1003 (2008.01.16-23.15.09) ... gzip -dc /sw/src/ncbitools-2.2.6.tar.gz | /sw/bin/tar -xf - --no-same-owner --no-same-permissions cp /sw/src/vector.Z . patch -p1 </sw/fink/dists/unstable/main/finkinfo/sci/ncbitools.patch patching file LICENSE patching file demo.fasta patching file ncbi/api/salsap.h patching file ncbi/api/salutil.h patching file ncbi/corelib/ncbimisc.c patching file ncbi/corelib/ncbithr.c patching file ncbi/vibrant/vibwndws.c perl -pi -e 's/(FSLockRange|FSUnlockRange)/MF_\1/g' `grep -lri lockrange .` ncbi/make/makedis.csh platform is darwin Darwin guest-wireless-207-151-243-112.usc.edu 9.1.0 Darwin Kernel Version 9.1.0: Wed Oct 31 17:46:22 PDT 2007; root:xnu-1228.0.2~1/RELEASE_I386 i386 make CFLAGS1="-O2 -c -no-cpp-precomp -Wno-long-double -g " LDFLAGS1="-framework CoreServices -O2 -g" OTHERLIBS="-lc" SHELL="/bin/sh" LCL="dwn" RAN="ranlib" CC="cc -pipe" LIB30=libncbicn3d.a LIB28=libvibgif.a LIB4=libvibrant.a LIB20=libncbidesk.a LIB45=libddvlib.a VIBFLAG="-DWIN_MAC -I/Developer/Headers/FlatCarbon" VIBLIBS="-framework Carbon -framework CoreServices" all chmod -R ug+rw,o+r . ../include ./ln-if-absent ../corelib/tsprintf.h ../include ./ln-if-absent ../corelib/gifgen.h ../include ./ln-if-absent ../corelib/ncbi*.h ../include ./ln-if-absent ../corelib/tree*.h ../include ./ln-if-absent ../corelib/regex.h ../include ./ln-if-absent ../corelib/matrix.h ../include ./ln-if-absent ../corelib/binary.h ../include ./ln-if-absent ../corelib/morefile/*.h ../include ./ln-if-absent ../corelib/morefile/*.c . ./ln-if-absent ../link/macmet/MoreCarbonAccessors.h ../include ./ln-if-absent ../corelib/ncbilcl.dwn ../include/ncbilcl.h ./ln-if-absent ../corelib/*.c . ./ln-if-absent ../corelib/core*.h . ./ln-if-absent ../asnlib/*.h . mv asn.h ../include ./ln-if-absent ../asnlib/*.c . ./ln-if-absent ../connect/*.c . ./ln-if-absent ../connect/ncbi_ansi_ext.h . ./ln-if-absent ../connect/ncbi_priv.h . ./ln-if-absent ../connect/ncbi_comm.h . ./ln-if-absent ../connect/ncbi_config.h . ./ln-if-absent ../connect/ncbi_lbsm.h . make: [copy] Error 1 (ignored) ./ln-if-absent ../connect/ncbi_lbsm_ipc.h . make: [copy] Error 1 (ignored) ./ln-if-absent ../connect/ncbi_host_infop.h . ./ln-if-absent ../connect/ncbi_server_infop.h . ./ln-if-absent ../connect/ncbi_servicep.h . ./ln-if-absent ../connect/ncbi_dispd.h . ./ln-if-absent ../connect/ncbi_lbsmd.h . ./ln-if-absent ../connect/*.h ../include mkdir ../include/connect chmod ug+rw,o+r ../include/connect rm ../include/ncbi_*.h ../include/connect_export.h cp -fp ../connect/ncbi_*.h ../connect/connect_export.h ../include/connect ./ln-if-absent ../ctools/*.c . mkdir ../include/ctools chmod ug+rw,o+r ../include/ctools cp -fp ../ctools/*.h ../include/ctools ./ln-if-absent ../connect/lbapi/*.c . ./ln-if-absent ../connect/lbapi/*.h ../include ./ln-if-absent ../object/*.c . ./ln-if-absent ../object/*.h ../include ./ln-if-absent ../access/*.c . ./ln-if-absent ../access/*.h ../include ./ln-if-absent ../asnstat/*.h ../include ./ln-if-absent ../api/*.h ../include ./ln-if-absent ../api/*.c . ./ln-if-absent ../cdromlib/*.h ../include ./ln-if-absent ../cdromlib/*.c . ./ln-if-absent ../vibrant/*.h ../include ./ln-if-absent ../vibrant/*.c . ./ln-if-absent ../desktop/*.h ../include ./ln-if-absent ../desktop/*.c . ./ln-if-absent ../biostruc/*.h ../include ./ln-if-absent ../biostruc/*.c . ./ln-if-absent ../biostruc/cdd/*.h ../include ./ln-if-absent ../biostruc/cdd/*.c . ./ln-if-absent ../biostruc/cn3d/*.h ../include ./ln-if-absent ../biostruc/cn3d/*.c . ./ln-if-absent ../tools/*.h ../include ./ln-if-absent ../tools/*.c . ./ln-if-absent ../cn3d/*.h ../include ./ln-if-absent ../cn3d/*.c . ./ln-if-absent ../gif/*.c . ./ln-if-absent ../gif/*.h ../include ./ln-if-absent ../ddv/*.h ../include ./ln-if-absent ../ddv/*.c . ./ln-if-absent ../regexp/*.c . ./ln-if-absent ../regexp/*.h ../include ./ln-if-absent ../internal/compr/*.c . set: No match. make: [copy] Error 1 (ignored) ./ln-if-absent ../internal/compr/*.h ../include set: No match. make: [copy] Error 1 (ignored) ./ln-if-absent ../internal/libindx/*.c . set: No match. make: [copy] Error 1 (ignored) ./ln-if-absent ../internal/libindx/*.h ../include set: No match. make: [copy] Error 1 (ignored) ./ln-if-absent ../internal/libpars/*.c . set: No match. make: [copy] Error 1 (ignored) ./ln-if-absent ../internal/libpars/*.h ../include set: No match. make: [copy] Error 1 (ignored) ./ln-if-absent ../internal/ideogram/*.c . set: No match. make: [copy] Error 1 (ignored) ./ln-if-absent ../internal/ideogram/*.dat . set: No match. make: [copy] Error 1 (ignored) ./ln-if-absent ../internal/ideogram/ideochr*.h ../include set: No match. make: [copy] Error 1 (ignored) ./ln-if-absent ../internal/ideogram/ideoorgs.h . make: [copy] Error 1 (ignored) ./ln-if-absent ../internal/ccap/*.c . set: No match. make: [copy] Error 1 (ignored) ./ln-if-absent ../internal/ccap/*.dat . set: No match. make: [copy] Error 1 (ignored) ./ln-if-absent ../internal/ccap/*.h ../include set: No match. make: [copy] Error 1 (ignored) ./ln-if-absent ncbidraw.c ncbidrwg.c ./ln-if-absent ncbithr.c ncbithrs.c ./ln-if-absent ../network/nsclilib/*.h ../include ./ln-if-absent ../network/blast3/client/*.h ../include ./ln-if-absent ../network/id1arch/*.h ../include chmod -R ug+rw,o+r . echo Waiting...go Waiting...go cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbithr.c cp -p ncbithr.o ../lib cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbibs.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon wwwutils.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbierr.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbienv.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbifile.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbimain.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbiprop.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbimath.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbimem.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbimisc.c ncbimisc.c: In function 'Nlm_CtoPstr': ncbimisc.c:1132: warning: 'C2PStr' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/TextUtils.h:668) ncbimisc.c: In function 'Nlm_PtoCstr': ncbimisc.c:1138: warning: 'P2CStr' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/TextUtils.h:692) cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbimsg.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbistr.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbisgml.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbitime.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbilang.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon asnbufo.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon asndebin.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon asnenbin.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon asngen.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon asnio.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon asnlex.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon asnlext.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon asnout.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon asnprint.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon asntypes.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon asngenob.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon gifgen.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon togif.c cc -pipe -DNCBI_NOTHREADS_AVAIL -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbithrs.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon -DHAVE_STRING_H -DREGEX_MALLOC regex.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon tsprintf.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbiargs.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon tree.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbisock.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbi_socket.c ncbi_socket.c: In function 'LSOCK_Accept': ncbi_socket.c:1045: warning: pointer targets in passing argument 3 of 'accept' differ in signedness ncbi_socket.c: In function 's_Connect': ncbi_socket.c:1245: warning: pointer targets in passing argument 5 of 'getsockopt' differ in signedness ncbi_socket.c: In function 'SOCK_CreateOnTop': ncbi_socket.c:1801: warning: pointer targets in passing argument 3 of 'getpeername' differ in signedness ncbi_socket.c: In function 'DSOCK_RecvMsg': ncbi_socket.c:2592: warning: pointer targets in passing argument 6 of 'recvfrom' differ in signedness cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon matrix.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbibuf.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbi_buffer.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbi_core.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbi_core_c.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbi_util.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbi_priv.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbi_ansi_ext.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbi_connection.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbi_connector.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbi_connutil.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbi_file_connector.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbi_heapmgr.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbi_http_connector.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbi_memory_connector.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbi_lbsmd_stub.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbi_host_info.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbi_server_info.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbi_service.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbi_service_connector.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbi_dispd.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbi_socket_connector.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon urlquery.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon lbapi.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon binary.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon ncbi_sendmail.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon asn_connection.c cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon drwnflpt.c In file included from drwnflpt.c:3: FullPath.c: In function 'FSpGetFullPath': FullPath.c:167: warning: 'PBGetCatInfoSync' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:8697) FullPath.c:191: warning: 'PBGetCatInfoSync' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:8697) FullPath.c: In function 'FSpLocationFromFullPath': FullPath.c:241: warning: 'NewAliasMinimalFromFullPath' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Aliases.h:899) FullPath.c:245: warning: 'ResolveAlias' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Aliases.h:925) cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon drwnfspc.c In file included from drwnfspc.c:3: FSpCompat.c: In function 'FSMakeFSSpecCompat': FSpCompat.c:254: warning: 'FSMakeFSSpec' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:10072) FSpCompat.c: In function 'FSpOpenDFCompat': FSpCompat.c:291: warning: 'FSpOpenDF' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:10091) FSpCompat.c: In function 'FSpOpenRFCompat': FSpCompat.c:320: warning: 'FSpOpenRF' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:10110) FSpCompat.c: In function 'FSpCreateCompat': FSpCompat.c:375: warning: 'FSpCreate' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:10130) FSpCompat.c: In function 'FSpDirCreateCompat': FSpCompat.c:421: warning: 'FSpDirCreate' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:10149) FSpCompat.c: In function 'FSpDeleteCompat': FSpCompat.c:443: warning: 'FSpDelete' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:10165) FSpCompat.c: In function 'FSpGetFInfoCompat': FSpCompat.c:470: warning: 'FSpGetFInfo' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:10183) FSpCompat.c: In function 'FSpSetFInfoCompat': FSpCompat.c:502: warning: 'FSpSetFInfo' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:10201) FSpCompat.c: In function 'FSpSetFLockCompat': FSpCompat.c:524: warning: 'FSpSetFLock' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:10217) FSpCompat.c: In function 'FSpRstFLockCompat': FSpCompat.c:546: warning: 'FSpRstFLock' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:10233) FSpCompat.c: In function 'FSpRenameCompat': FSpCompat.c:570: warning: 'FSpRename' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:10251) FSpCompat.c: In function 'FSpCatMoveCompat': FSpCompat.c:598: warning: 'FSpCatMove' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:10269) FSpCompat.c: In function 'FSpExchangeFilesCompat': FSpCompat.c:863: warning: 'FSpExchangeFiles' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:10287) FSpCompat.c: In function 'FSpOpenResFileCompat': FSpCompat.c:886: warning: 'FSpOpenResFile' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Resources.h:1233) FSpCompat.c: In function 'FSpCreateResFileCompat': FSpCompat.c:941: warning: 'FSpCreateResFile' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Resources.h:1253) cc -pipe -O2 -c -no-cpp-precomp -Wno-long-double -g -I../include -DWIN_MAC -I/Developer/Headers/FlatCarbon drwnmfls.c In file included from MoreFilesX.c:59, from drwnmfls.c:3: ../include/MoreFilesX.h:1467: error: conflicting types for 'FSVolumeMount' /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:7299: error: previous declaration of 'FSVolumeMount' was here In file included from drwnmfls.c:3: MoreFilesX.c: In function 'FSGetVolParms': MoreFilesX.c:219: warning: 'PBHGetVolParmsSync' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:7607) MoreFilesX.c: In function 'FSMakeFSRef': MoreFilesX.c:425: warning: 'PBMakeFSRefSync' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:7492) MoreFilesX.c: In function 'UnicodeNameGetHFSName': MoreFilesX.c:531: warning: 'GetScriptManagerVariable' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Script.h:993) MoreFilesX.c:532: warning: 'GetScriptManagerVariable' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Script.h:993) MoreFilesX.c: In function 'HFSNameGetUnicodeName': MoreFilesX.c:608: warning: 'GetScriptManagerVariable' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Script.h:993) MoreFilesX.c:609: warning: 'GetScriptManagerVariable' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Script.h:993) MoreFilesX.c: In function 'FSBumpDate': MoreFilesX.c:1003: warning: 'GetUTCDateTime' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/UTCUtils.h:181) MoreFilesX.c: In function 'FSMoveRenameObjectUnicode': MoreFilesX.c:1396: warning: 'NumToString' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/NumberFormatting.h:170) MoreFilesX.c:1401: warning: 'DirCreate' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:9303) MoreFilesX.c:1427: warning: 'HDelete' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:9322) MoreFilesX.c:1457: warning: 'HDelete' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:9322) MoreFilesX.c: In function 'MF_FSLockRange': MoreFilesX.c:2149: warning: 'PBLockRangeSync' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:8484) MoreFilesX.c: In function 'MF_FSUnlockRange': MoreFilesX.c:2172: warning: 'PBUnlockRangeSync' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:8516) MoreFilesX.c: In function 'FSGetDirAccess': MoreFilesX.c:2201: warning: 'PBHGetDirAccessSync' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:7786) MoreFilesX.c: In function 'FSSetDirAccess': MoreFilesX.c:2257: warning: 'PBHSetDirAccessSync' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:7816) MoreFilesX.c: In function 'FSGetVolMountInfoSize': MoreFilesX.c:2282: warning: 'PBGetVolMountInfoSize' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:7638) MoreFilesX.c: In function 'FSGetVolMountInfo': MoreFilesX.c:2307: warning: 'PBGetVolMountInfo' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:7653) MoreFilesX.c: At top level: MoreFilesX.c:2322: error: conflicting types for 'FSVolumeMount' /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:7299: error: previous declaration of 'FSVolumeMount' was here MoreFilesX.c: In function 'FSVolumeMount': MoreFilesX.c:2330: warning: 'PBVolumeMount' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:7665) MoreFilesX.c: In function 'FSMapID': MoreFilesX.c:2362: warning: 'PBHMapIDSync' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:7846) MoreFilesX.c: In function 'FSMapName': MoreFilesX.c:2390: warning: 'PBHMapNameSync' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:7876) MoreFilesX.c: In function 'FSCopyFile': MoreFilesX.c:2454: warning: 'PBHCopyFileSync' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:7906) MoreFilesX.c: In function 'FSMoveRename': MoreFilesX.c:2526: warning: 'PBHMoveRenameSync' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:9489) MoreFilesX.c: In function 'FSResolveFileIDRef': MoreFilesX.c:2569: warning: 'PBResolveFileIDRefSync' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:7966) MoreFilesX.c: In function 'FSCreateFileIDRef': MoreFilesX.c:2605: warning: 'PBCreateFileIDRefSync' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:7936) MoreFilesX.c: In function 'GetTempBuffer': MoreFilesX.c:2659: warning: 'FreeMem' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/MacMemory.h:1041) MoreFilesX.c:2661: warning: 'MaxBlock' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/MacMemory.h:628) MoreFilesX.c: In function 'FSSetDefault': MoreFilesX.c:2727: warning: 'HGetVol' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:9181) MoreFilesX.c:2735: warning: 'HSetVol' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:8303) MoreFilesX.c: In function 'FSRestoreDefault': MoreFilesX.c:2771: warning: 'HSetVol' is deprecated (declared at /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/Files.h:8303) make: *** [drwnmfls.o] Error 1 Fatal error building NCBI core libraries. Please be sure that you have X11 and Motif libraries installed. The NCBI toolkit FAQ at ftp://ncbi.nlm.nih.gov/toolbox/FAQ.html may be helpful. ### execution of ncbi/make/makedis.csh failed, exit code 1 Removing runtime build-lock... Removing build-lock package... /sw/bin/dpkg-lockwait -r fink-buildlock-ncbitools-2.2.6-1003 (Reading database ... 42700 files and directories currently installed.) Removing fink-buildlock-ncbitools-2.2.6-1003 ... Failed: phase compiling: ncbitools-2.2.6-1003 failed I manually downloaded the latest ncbitools source code from the NCBI website and was able to compile and build it without any problems. Thanks, John ------------------------------------------------------------------------- This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2008. http://clk.atdmt.com/MRT/go/vse0120000070mrt/direct/01/ _______________________________________________ Fink-users mailing list Fink-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-users