Hi,
Thank you so much for all of your help. The following is the feedback of DCMTK
compiling error.
I checked some include files of system that looks like they are requesting the
compile option of _DARWIN_C_SOURCE. The configure file in config directory has
no this option. I modified the configure file as following:
Original configuration:
if test "${CXXFLAGS}set" = set ; then
case "$CXX" in
c++|g++|gcc)
CXXFLAGS="-Wall $pedantic"
CFLAGS="-Wall $pedantic"
;;
cc++)
CXXFLAGS="-Wall"
CFLAGS="-Wall"
;;
*)
CXXFLAGS=""
CFLAGS=""
;;
esac
fi
Revised configuration:
if test "${CXXFLAGS}set" = set ; then
case "$CXX" in
c++|g++|gcc)
CXXFLAGS="-D_DARWIN_C_SOURCE -Wall $pedantic"
CFLAGS="-D_DARWIN_C_SOURCE -Wall $pedantic"
;;
cc++)
CXXFLAGS="-D_DARWIN_C_SOURCE -Wall"
CFLAGS="-D_DARWIN_C_SOURCE -Wall"
;;
*)
CXXFLAGS="-D_DARWIN_C_SOURCE"
CFLAGS="-D_DARWIN_C_SOURCE"
;;
esac
fi
After the modification as above, I can build the package successfully.
Hope the feedback could be useful.
Thank you again for all of your help!
Sumiko
-----Original Message-----
From: Alexander Hansen [mailto:[email protected]]
Sent: Friday, August 13, 2010 4:48 AM
To: Abe, Sumiko
Cc: Bernd Kuemmerlen; fink-users mailing list
Subject: Re: [fink-core] DCMTK and xmedcon unstable package install...
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Hash: SHA1
On 8/12/10 5:32 PM, Abe, Sumiko wrote:
> Sorry, I forgot to attach the log file.
>
>
>
> -----Original Message-----
> From: Abe, Sumiko
> Sent: Thursday, August 12, 2010 2:31 PM
> To: 'Martin Costabel'
> Cc: Fink Core Group; 'Bernd Kuemmerlen'
> Subject: RE: [fink-core] DCMTK and xmedcon unstable package install...
>
> Hi Martin,
>
> Thank you so much for all of your great help.
> The gzip package are built successfully. Also, I have built xmedcon too, it
> works on my macbook now, very happy, :-)
>
> But for DCMTK, not happy, :. It still could not be built...
>
> The following is the output error, and the attached if is the config.log from
> dcmtk.
>
> ................
> c++ -DHAVE_CONFIG_H -DNDEBUG -c -I. -I. -I../include
> -I../../config/include \
> -I/sw/include -O -I/sw/include/libxml2 -I/sw/include
> -D_REENTRANT -D_XOPEN_SOURCE_EXTENDED -D_XOPEN_SOURCE=500 -D_BSD_SOURCE
> -D_BSD_COMPAT -D_OSF_SOURCE -D_POSIX_C_SOURCE=199506L -Wall oflist.cc
> c++ -DHAVE_CONFIG_H -DNDEBUG -c -I. -I. -I../include
> -I../../config/include \
> -I/sw/include -O -I/sw/include/libxml2 -I/sw/include
> -D_REENTRANT -D_XOPEN_SOURCE_EXTENDED -D_XOPEN_SOURCE=500 -D_BSD_SOURCE
> -D_BSD_COMPAT -D_OSF_SOURCE -D_POSIX_C_SOURCE=199506L -Wall ofstring.cc
> In file included from /usr/include/sys/attr.h:42,
> from /usr/include/sys/mount.h:76,
> from /usr/include/libc.h:45,
> from ../include/dcmtk/ofstd/ofstdinc.h:320,
> from ../include/dcmtk/ofstd/ofstring.h:61,
> from ofstring.cc:47:
> /usr/include/sys/ucred.h:91: error: 'u_long' does not name a type
> /usr/include/sys/ucred.h:137: error: 'u_int' does not name a type
> In file included from /usr/include/sys/mount.h:76,
> from /usr/include/libc.h:45,
> from ../include/dcmtk/ofstd/ofstdinc.h:320,
> from ../include/dcmtk/ofstd/ofstring.h:61,
> from ofstring.cc:47:
> /usr/include/sys/attr.h:77: error: 'u_short' does not name a type
> /usr/include/sys/attr.h:430: error: 'u_long' does not name a type
> /usr/include/sys/attr.h:442: error: 'u_char' does not name a type
> make[2]: *** [ofstring.o] Error 1
> make[1]: *** [libsrc-all] Error 2
> make: *** [ofstd-all] Error 2
> ### execution of make failed, exit code 2
> Removing runtime build-lock...
> Removing build-lock package...
> /sw/bin/dpkg-lockwait -r fink-buildlock-dcmtk-3.5.4-1002
> (Reading database ... 25650 files and directories currently installed.)
> Removing fink-buildlock-dcmtk-3.5.4-1002 ...
> Failed: phase compiling: dcmtk-3.5.4-1002 failed
>
> Before reporting any errors, please run "fink selfupdate" and
> try again. If you continue to have issues, please check to see if the
> FAQ on fink's website solves the problem. If not, ask on the fink-users
> or fink-beginners mailing lists, with a carbon copy to the maintainer:
>
> Bernd Kuemmerlen <[email protected]>
>
> Note that this is preferable to emailing the maintainer directly, since
> most fink package maintainers do not have access to all possible
> hardware and software configurations.
>
>
> Sorry for interrupt you again,
>
> Sumiko
>
(moving from fink-core to fink-users, since the issue is not with a core
package)
(removing Martin, since this isn't his package, and it's a separate
issue from all of the prior discussion)
(for the maintainer's benefit, OS version is 10.6.3--we haven't heard
yet whether 32-bit or 64-bit).
(We generally prefer that people don't send log files to the list, but
rather to individuals who specifically ask for them)
I believe that one of the source header files (probably
include/dcmtk/ofstd/ofstdinc.h) needs to be patched to have
#include <sys/types.h>
though I'm not sure, since normally such errors have shown up in 10.5 as
well as 10.6, and in this case the package builds on 10.5.
- --
Alexander Hansen
Fink User Liaison
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