Dear Fink team!
I am trying to install the atlas libraries[atlas-3.9.11-12] on my iMac
(OSX 10.6.8).
My fink installation is the following
> Package manager version: 0.32.5.5
> Distribution version: selfupdate-rsync Wed Apr 11 11:33:52 2012, 10.6, i386
> Trees: local/main stable/main stable/crypto unstable/main unstable/crypto
> Xcode: 3.2.6
> Max. Fink build jobs: 4
The error I'm encountering doesn't seem to be a compiler error, but a
test which is failed by the library. I copy below the output.
I would be very grateful about any hint about how to proceed!
Thanks a lot in advance!
Ralph
gcc -DL2SIZE=4194304 -I/sw/src/fink.build/atlas-3.9.11-12/bld/include
-I/sw/src/fink.build/atlas-3.9.11-12/bld/../ATLAS//include
-I/sw/src/fink.build/atlas-3.9.11-12/bld/../ATLAS//include/contrib
-DAdd_ -DF77_INTEGER=int -DStringSunStyle -DATL_OS_OSX
-DATL_ARCH_UNKNOWNx86 -DATL_CPUMHZ=3600 -DATL_SSE3 -DATL_SSE2 -DATL_SSE1
-DATL_GAS_x8632 -DATL_FULL_LAPACK -DATL_NCPU=4 -fPIC -O3
-fomit-frame-pointer -mfpmath=387 -m32 -o xdcpsctst dcpsctest.o \
ATL_dcpsc_stub.o dcpsc.o
/sw/src/fink.build/atlas-3.9.11-12/bld/lib/libtstatlas.a -lpthread -lm
/sw/src/fink.build/atlas-3.9.11-12/bld/bin/ATLrun.sh
/sw/src/fink.build/atlas-3.9.11-12/bld/tune/blas/level1 xdcpsctst -n 777
-X 4 1 -1 2 -3 -Y 4 1 -1 3 -2
ERROR: Y[238], correct=0.449648, computed=0.449648
ERROR: Y[585], correct=-0.014062, computed=-0.014062
ITST N alpha incX incY TEST
====== ======== ======== ==== ==== ======
0 777 1.00 1 1 PASSED
1 777 -1.00 1 1 PASSED
2 777 0.90 1 1 PASSED
3 777 1.00 1 -1 PASSED
4 777 -1.00 1 -1 PASSED
5 777 0.90 1 -1 PASSED
6 777 1.00 1 3 PASSED
7 777 -1.00 1 3 PASSED
8 777 0.90 1 3 PASSED
9 777 1.00 1 -2 PASSED
10 777 -1.00 1 -2 PASSED
11 777 0.90 1 -2 PASSED
12 777 1.00 -1 1 PASSED
13 777 -1.00 -1 1 PASSED
14 777 0.90 -1 1 PASSED
15 777 1.00 -1 -1 PASSED
16 777 -1.00 -1 -1 PASSED
17 777 0.90 -1 -1 PASSED
18 777 1.00 -1 3 PASSED
19 777 -1.00 -1 3 PASSED
20 777 0.90 -1 3 FAILED
21 777 1.00 -1 -2 PASSED
22 777 -1.00 -1 -2 PASSED
23 777 0.90 -1 -2 PASSED
24 777 1.00 2 1 PASSED
25 777 -1.00 2 1 PASSED
26 777 0.90 2 1 PASSED
27 777 1.00 2 -1 PASSED
28 777 -1.00 2 -1 PASSED
29 777 0.90 2 -1 PASSED
30 777 1.00 2 3 PASSED
31 777 -1.00 2 3 PASSED
32 777 0.90 2 3 PASSED
33 777 1.00 2 -2 PASSED
34 777 -1.00 2 -2 PASSED
35 777 0.90 2 -2 PASSED
36 777 1.00 -3 1 PASSED
37 777 -1.00 -3 1 PASSED
38 777 0.90 -3 1 PASSED
39 777 1.00 -3 -1 PASSED
40 777 -1.00 -3 -1 PASSED
41 777 0.90 -3 -1 PASSED
42 777 1.00 -3 3 PASSED
43 777 -1.00 -3 3 PASSED
44 777 0.90 -3 3 PASSED
45 777 1.00 -3 -2 PASSED
46 777 -1.00 -3 -2 PASSED
47 777 0.90 -3 -2 PASSED
1 of 48 CPSC TESTS FAILED!!
make[8]: *** [dcpsctest] Error 1
TST: make dcpsctest urout=cpsc1_x1y1.c opt=""
rm -f dcpsc.c dcpsc.o
cp
/sw/src/fink.build/atlas-3.9.11-12/bld/../ATLAS//tune/blas/level1/CPSC/cpsc1_x1y1.c
dcpsc.c
gcc -DL2SIZE=4194304 -I/sw/src/fink.build/atlas-3.9.11-12/bld/include
-I/sw/src/fink.build/atlas-3.9.11-12/bld/../ATLAS//include
-I/sw/src/fink.build/atlas-3.9.11-12/bld/../ATLAS//include/contrib
-DAdd_ -DF77_INTEGER=int -DStringSunStyle -DATL_OS_OSX
-DATL_ARCH_UNKNOWNx86 -DATL_CPUMHZ=3600 -DATL_SSE3 -DATL_SSE2 -DATL_SSE1
-DATL_GAS_x8632 -DATL_FULL_LAPACK -DATL_NCPU=4 -O -fomit-frame-pointer
-m32 -DDREAL -c dcpsc.c
gcc -DL2SIZE=4194304 -I/sw/src/fink.build/atlas-3.9.11-12/bld/include
-I/sw/src/fink.build/atlas-3.9.11-12/bld/../ATLAS//include
-I/sw/src/fink.build/atlas-3.9.11-12/bld/../ATLAS//include/contrib
-DAdd_ -DF77_INTEGER=int -DStringSunStyle -DATL_OS_OSX
-DATL_ARCH_UNKNOWNx86 -DATL_CPUMHZ=3600 -DATL_SSE3 -DATL_SSE2 -DATL_SSE1
-DATL_GAS_x8632 -DATL_FULL_LAPACK -DATL_NCPU=4 -fPIC -O3
-fomit-frame-pointer -mfpmath=387 -m32 -o xdcpsctst dcpsctest.o \
ATL_dcpsc_stub.o dcpsc.o
/sw/src/fink.build/atlas-3.9.11-12/bld/lib/libtstatlas.a -lpthread -lm
/sw/src/fink.build/atlas-3.9.11-12/bld/bin/ATLrun.sh
/sw/src/fink.build/atlas-3.9.11-12/bld/tune/blas/level1 xdcpsctst -n 777
ITST N alpha incX incY TEST
====== ======== ======== ==== ==== ======
0 777 1.00 1 1 PASSED
1 777 -1.00 1 1 PASSED
2 777 0.90 1 1 PASSED
ALL CPSC SANITY TESTS PASSED.
make[7]: *** [dinstall_cpsc] Bus error
make[6]: *** [Make_dcpsc] Error 2
make[5]: *** [dgen] Error 2
make[4]: *** [dlib] Error 2
make[3]: *** [lib.grd] Error 2
make[2]: *** [IStage1] Error 2
ERROR 577 DURING CACHESIZE SEARCH!!. CHECK INSTALL_LOG/Stage1.log FOR
DETAILS.
cd /sw/src/fink.build/atlas-3.9.11-12/bld ; make error_report
make -f Make.top error_report
uname -a 2>&1 >> bin/INSTALL_LOG/ERROR.LOG
gcc -v 2>&1 >> bin/INSTALL_LOG/ERROR.LOG
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/sw/lib/gcc4.6/libexec/gcc/i386-apple-darwin10.8.0/4.6.3/lto-wrapper
Target: i386-apple-darwin10.8.0
Configured with: ../gcc-4.6.3/configure --prefix=/sw
--prefix=/sw/lib/gcc4.6 --mandir=/sw/share/man
--infodir=/sw/lib/gcc4.6/info
--enable-languages=c,c++,fortran,lto,objc,obj-c++,java --with-gmp=/sw
--with-libiconv-prefix=/sw --with-ppl=/sw --with-cloog=/sw
--with-mpc=/sw --with-system-zlib --x-includes=/usr/X11R6/include
--x-libraries=/usr/X11R6/lib --program-suffix=-fsf-4.6
--enable-cloog-backend=isl
Thread model: posix
gcc version 4.6.3 (GCC)
gcc -V 2>&1 >> bin/INSTALL_LOG/ERROR.LOG
gcc: error: unrecognized option '-V'
gcc: fatal error: no input files
compilation terminated.
make[4]: [error_report] Error 1 (ignored)
gcc --version 2>&1 >> bin/INSTALL_LOG/ERROR.LOG
tar cf error_UNKNOWNx8632SSE3.tar Make.inc bin/INSTALL_LOG/*
gzip --best error_UNKNOWNx8632SSE3.tar
mv error_UNKNOWNx8632SSE3.tar.gz error_UNKNOWNx8632SSE3.tgz
Error report error_<ARCH>.tgz has been created in your top-level ATLAS
directory. Be sure to include this file in any help request.
cat: ../../CONFIG/error.txt: No such file or directory
cat: ../../CONFIG/error.txt: No such file or directory
make[1]: *** [build] Error 255
make: *** [build] Error 2
### execution of /tmp/fink.jbKjh failed, exit code 2
Removing runtime build-lock...
Removing build-lock package...
/sw/bin/dpkg-lockwait -r fink-buildlock-atlas-3.9.11-12
(Reading database ... 202738 files and directories currently installed.)
Removing fink-buildlock-atlas-3.9.11-12 ...
Failed: phase compiling: atlas-3.9.11-12 failed
Before reporting any errors, please run "fink selfupdate" and try again.
Also try using "fink configure" to set your maximum build jobs to 1 and
attempt to build the package again.
If you continue to have issues, please check to see if the FAQ on Fink's
website solves the problem. If not, ask on one (not both, please) of
these mailing lists:
The Fink Users List <[email protected]>
The Fink Beginners List <[email protected]>.
Please try to include the complete error message in your report. This
generally consists of a compiler line starting with e.g. "gcc" or "g++"
followed by the actual error output from the compiler.
Also include the following system information:
Package manager version: 0.32.5.5
Distribution version: selfupdate-rsync Wed Apr 11 11:33:52 2012, 10.6, i386
Trees: local/main stable/main stable/crypto unstable/main unstable/crypto
Xcode: 3.2.6
Max. Fink build jobs: 4
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