On Fri, Mar 01, 2013 at 01:51:25PM -0700, Alexander Hansen wrote: > On 3/1/13 9:42 AM, Valentina Erastova wrote: > > > > On 28 Feb 2013, at 20:41, Alexander Hansen <[email protected]> > > wrote: > > > >> On 2/28/13 8:11 AM, Valentina Erastova wrote: > >>> > >>> On 28 Feb 2013, at 14:40, Alexander Hansen <[email protected]> > >>> wrote: > >>> > >>>> On 2/27/13 5:14 AM, Valentina Erastova wrote: > >>>>> Hello, > >>>>> > >>>>> I am trying to install gromacs 4.6 on my mac and I am getting errors. I > >>>>> have done self update and reduced number of jobs to 1, as recommended. > >>>>> I still cannot make progress. The errors I get are: > >>>>> > >>>>> > >>>>> CMake Error at CMakeLists.txt:800 (message): > >>>>> Cannot compile AVX intrinsics. Consider switching compiler. > >>>>> > >>>>> > >>>>> -- Configuring incomplete, errors occurred! > >>>>> ### execution of /tmp/fink.1WQn_ failed, exit code 1 > >>>>> ### execution of /tmp/fink.K719v failed, exit code 1 > >>>>> > >>>>> > >>>>> Thank you very much! > >>>>> > >>>>> > >>> > >>> Thank you for your reply! I have already manually installed it. > >>> Nevertheless I am due to install it on another machine - both are OX > >>> 10.8.2 > >>> > >>> > >> > >> Hopefully today's update to gromacs will work for you, then. > > > > installs fine now! > > > > > >> > >>>> > >>>> Can you provide the line of output before your error message above, for > >>>> some context? > >>>> > >>>> What operating system version are you running? > >>>> What Xcode version are you using? ("fink list xcode" is a quick way to > >>>> get that) > >>> > >>> Information about 7005 packages read in 1 seconds. > >>> i xcode 4.5.0.0.1.1249367 [virtual package > >>> representing the developer tools] > >>> i xcode.app 4.6-1 [virtual package > >>> representing Xcode] > >>> > >>> Do you know if there is a double precision version too available via fink? > >>> > >>>> > >>>> > >> > >> You might want to update your Xcode command line tools (the Xcode > >> preferences has an option to do that). > >> > >> What exactly do you want a double precision version of? > > > > Gromacs. > > > > Seems it installs it automatically in the multi processor machine, but not > > on my desktop. it's normally gromacs_d > > > > Thank you for your help! > > > >> > > Ah.
This thread is very confusing. The user seems to have not synced his Xcode.app and Command Line Tools for starters. As for double precision, the gromacs build for both gromacs.info and gromacs-mpi.info can't complete without doing that. The cmake build is repeated twice (as is obvious by inspection of the info files) with the default single precision and then double precision (with the latter binaries suffixed with _d). > > I would think that it _should_ be building the same way on both > machines. That's probably something to discuss further with the gromacs > maintainer (cc'ed). > > -- > Alexander Hansen, Ph.D. > Fink User Liaison > My package updates: http://finkakh.wordpress.com/ ------------------------------------------------------------------------------ Everyone hates slow websites. So do we. Make your web apps faster with AppDynamics Download AppDynamics Lite for free today: http://p.sf.net/sfu/appdyn_d2d_feb _______________________________________________ Fink-users mailing list [email protected] List archive: http://news.gmane.org/gmane.os.macosx.fink.user Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-users
