Hello, I have trouble trying to install PySparse on a Linux cluster. The pip command:
pip install --user pysparse did not work. I found on a forum this command: pip install --user git+http://git.code.sf.net/p/pysparse/git#egg=PySparse <git+http://git.code.sf.net/p/pysparse/git#egg=PySparse> after which it said the installation was successful. However, when I try to import Pysparse, I have an error message that says: Traceback (most recent call last): File "<stdin>", line 1, in <module> File "/home/cmaurel/.local/lib/python2.6/site-packages/pysparse/__init__.py", line 13, in <module> from sparse import spmatrix File "/home/cmaurel/.local/lib/python2.6/site-packages/pysparse/sparse/__init__.py", line 6, in <module> from pysparseMatrix import * File "/home/cmaurel/.local/lib/python2.6/site-packages/pysparse/sparse/pysparseMatrix.py", line 57, in <module> from pysparse.sparse import spmatrix ImportError: /home/cmaurel/.local/lib/python2.6/site-packages/pysparse/sparse/spmatrix.so: undefined symbol: __intel_security_cookie I also independently tried to run: python setup.py build but this was also unsuccessful with the error: creating build/temp.linux-x86_64-2.6 creating build/temp.linux-x86_64-2.6/src compile options: '-DLENFUNC_OK=1 -DATLAS_INFO="\"3.8.4\"" -Isrc -I/usr/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -I/usr/include/python2.6 -c' icc: src/spmatrixmodule.c icc: command line warning #10006: ignoring unknown option '-fwrapv' icc: command line warning #10006: ignoring unknown option '-fwrapv' icc: error #10236: File not found: 'src/spmatrixmodule.c' icc: command line error: no files specified; for help type "icc -help" icc: command line warning #10006: ignoring unknown option '-fwrapv' icc: command line warning #10006: ignoring unknown option '-fwrapv' icc: error #10236: File not found: 'src/spmatrixmodule.c' icc: command line error: no files specified; for help type "icc -help" error: Command "icc -fno-strict-aliasing -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -fPIC -DLENFUNC_OK=1 -DATLAS_INFO="\"3.8.4\"" -Isrc -I/usr/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -I/usr/include/python2.6 -c src/spmatrixmodule.c -o build/temp.linux-x86_64-2.6/src/spmatrixmodule.o" failed with exit status 1 Would anyone have an idea on how to fix this? Any help would be very much appreciated! Thank you in advance! Clara
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