Not sure if the patches you already have address this, but here are some 
hacks I collected to try to get libFLAC to build on Windows for Mixxx: 
http://mixxx.org/wiki/doku.php/build_windows_dependencies#libflac

I have never actually gotten it to build on x64 and right now just use 
OpenCodecs' distribution (also mentioned at that link) which has Visual 
Studio files that build fine for me.

Sincerely,
Sean M. Pappalardo
"D.J. Pegasus"
Mixxx Developer - Controller Specialist
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