I was able to import see.fossil and cerod.fossil from Cygwin with no issues. However for SQLite,
$ fossil export --git ../../../sqlite.fossil | git fast-import fatal: mark :60713 not declared fast-import: dumping crash report to ...../.git/modules/src/sqlite/fast_import_crash_1168 >From the crash report: fast-import crash report: fast-import process: 1168 parent process : 1 at Fri Oct 31 22:59:48 2014 fatal: mark :60713 not declared .... commit refs/heads/trunk mark :60705 committer drh <drh> 1257341402 +0000 data 83 from :60691 M 100644 :60706 src/main.c M 100644 :60698 src/sqliteInt.h commit refs/heads/shunning_error mark :60721 committer drh <drh> 1257360677 +0000 data 24 * from :60713
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