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Maintainer: fern...@freebsd.org Log URL: http://ampere1.nyi.freebsd.org/data/122arm64-quarterly/27f08246d4d3/logs/afni-21.2.09.log Build URL: http://ampere1.nyi.freebsd.org/build.html?mastername=122arm64-quarterly&build=27f08246d4d3 Log: =>> Building science/afni build started at Sun Nov 28 03:03:05 UTC 2021 port directory: /usr/ports/science/afni package name: afni-21.2.09 building for: FreeBSD 122arm64-quarterly-job-13 12.2-RELEASE FreeBSD 12.2-RELEASE arm64 maintained by: fern...@freebsd.org Makefile ident: Poudriere version: 3.2.8-21-g883afb07 Host OSVERSION: 1400008 Jail OSVERSION: 1202000 Job Id: 13 ---Begin Environment--- SHELL=/bin/csh OSVERSION=1202000 UNAME_v=FreeBSD 12.2-RELEASE UNAME_r=12.2-RELEASE BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-21-g883afb07 MASTERMNT=/usr/local/poudriere/data/.m/122arm64-quarterly/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/122arm64-quarterly/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=122arm64-quarterly SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/122arm64-quarterly/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for afni-21.2.09: DOCS=on: Build and/or install documentation ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- fern...@freebsd.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl PERL_USE_UNSAFE_INC=1 PYTHON="/usr/local/bin/python3.8" XDG_DATA_HOME=/wrkdirs/usr/ports/science/afni/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/afni/work HOME=/wrkdirs/usr/ports/science/afni/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/afni/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh LANG=en_US.UTF-8 LC_ALL=en_US.UTF-8 --End CONFIGURE_ENV-- --MAKE_ENV-- CC="cc" R_SHARE_DIR=/usr/local/lib/R/share MOTIFLIB="-L/usr/local/lib -lXm" PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/science/afni/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/afni/work HOME=/wrkdirs/usr/ports/science/afni/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/afni/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES LANG=en_US.UTF-8 LC_ALL=en_US.UTF-8 PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-DLIBICONV_PLUG" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -DLIBICONV_PLUG " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="i nstall -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PORTDOCS="" GTK2_VERSION="2.10.0" GTK3_VERSION="3.0.0" GTK4_VERSION="4.0.0" PYTHON_INCLUDEDIR=include/python3.8 PYTHON_LIBDIR=lib/python3.8 PYTHON_PLATFORM=freebsd12 PYTHON_SITELIBDIR=lib/python3.8/site-packages PYTHON_SUFFIX=38 PYTHON_EXT_SUFFIX=.cpython-38 PYTHON_VER=3.8 PYTHON_VERSION=python3.8 PYTHON2="@comment " PYTHON3="" OSREL=12.2 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PERL_VERSION=5.32.1 PERL_VER=5.32 PERL5_MAN1=lib/perl5/site_perl/man/man1 PERL5_MAN3=lib/perl5/site_perl/man/man3 SITE_PERL=lib/perl5/site_perl SITE_ARCH=lib/perl5/site_perl/mach/5.32 DOCSDIR="share/doc/afni" EXAMPLESDIR="share/examples/afni" DATADIR="share/afni" WWWDIR="www/afni" ETCDIR="etc/afni" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/afni DOCSDIR=/usr/local/share/doc/afni EXAMPLESDIR=/usr/local/share/examples/afni WWWDIR=/usr/local/www/afni ETCDIR=/usr/local/etc/afni --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 10.0.1 (g...@github.com:llvm/llvm-project.git llvmorg-10.0.1-0-gef32c611aa2) Target: aarch64-unknown-freebsd12.2 Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 10.0.1 (g...@github.com:llvm/llvm-project.git llvmorg-10.0.1-0-gef32c611aa2) Target: aarch64-unknown-freebsd12.2 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 10.0.1 (g...@github.com:llvm/llvm-project.git llvmorg-10.0.1-0-gef32c611aa2) Target: aarch64-unknown-freebsd12.2 Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=aarch64 OPSYS=FreeBSD _OSRELEASE=12.2-RELEASE OSREL=12.2 OSVERSION=1202000 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 1048576 stack size (kbytes, -s) 1048576 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License GPLv2 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> afni-21.2.09 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.17.5.pkg [122arm64-quarterly-job-13] Installing pkg-1.17.5... [122arm64-quarterly-job-13] Extracting pkg-1.17.5: .......... done ===> afni-21.2.09 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of afni-21.2.09 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by afni-21.2.09 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by afni-21.2.09 for building => SHA256 Checksum OK for afni-afni-AFNI_21.2.09_GH0.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by afni-21.2.09 for building ===> Extracting for afni-21.2.09 => SHA256 Checksum OK for afni-afni-AFNI_21.2.09_GH0.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for afni-21.2.09 ===> Applying FreeBSD patches for afni-21.2.09 from /usr/ports/science/afni/files =========================================================================== =======================<phase: build-depends >============================ ===> afni-21.2.09 depends on executable: gm4 - not found ===> Installing existing package /packages/All/m4-1.4.19,1.pkg [122arm64-quarterly-job-13] Installing m4-1.4.19,1... [122arm64-quarterly-job-13] `-- Installing gettext-runtime-0.21... [122arm64-quarterly-job-13] | `-- Installing indexinfo-0.3.1... [122arm64-quarterly-job-13] | `-- Extracting indexinfo-0.3.1: .... done [122arm64-quarterly-job-13] `-- Extracting gettext-runtime-0.21: .......... done [122arm64-quarterly-job-13] Extracting m4-1.4.19,1: .......... done ===> afni-21.2.09 depends on executable: gm4 - found ===> Returning to build of afni-21.2.09 ===> afni-21.2.09 depends on executable: R - not found ===> Installing existing package /packages/All/R-4.1.1_1.pkg [122arm64-quarterly-job-13] Installing R-4.1.1_1... [122arm64-quarterly-job-13] `-- Installing cairo-1.17.4,3... [122arm64-quarterly-job-13] | `-- Installing fontconfig-2.13.94_1,1... [122arm64-quarterly-job-13] | | `-- Installing expat-2.4.1... [122arm64-quarterly-job-13] | | `-- Extracting expat-2.4.1: .......... done [122arm64-quarterly-job-13] | | `-- Installing freetype2-2.11.0... <snip> zfun.c:200:41: note: passing argument to parameter 'src' here int zz_uncompress_some( int nsrc, char *src, int ndest, char *dest ) ^ zfun.c:410:40: warning: passing 'byte *' (aka 'unsigned char *') to parameter of type 'char *' converts between pointers to integer types with different sign [-Wpointer-sign] nx = (float)zz_compress_all( nbar , xbar , NULL ) ; ^~~~ zfun.c:179:39: note: passing argument to parameter 'src' here int zz_compress_all( int nsrc , char *src , char **dest ) ^ zfun.c:411:40: warning: passing 'byte *' (aka 'unsigned char *') to parameter of type 'char *' converts between pointers to integer types with different sign [-Wpointer-sign] ny = (float)zz_compress_all( nbar , ybar , NULL ) ; ^~~~ zfun.c:179:39: note: passing argument to parameter 'src' here int zz_compress_all( int nsrc , char *src , char **dest ) ^ zfun.c:417:44: warning: passing 'byte *' (aka 'unsigned char *') to parameter of type 'char *' converts between pointers to integer types with different sign [-Wpointer-sign] nxy = (float)zz_compress_all( 2*nbar , qbuf , NULL ) ; ^~~~ zfun.c:179:39: note: passing argument to parameter 'src' here int zz_compress_all( int nsrc , char *src , char **dest ) ^ zfun.c:421:44: warning: passing 'byte *' (aka 'unsigned char *') to parameter of type 'char *' converts between pointers to integer types with different sign [-Wpointer-sign] nxy2 = (float)zz_compress_all( 2*nbar , qbuf , NULL ) ; ^~~~ zfun.c:179:39: note: passing argument to parameter 'src' here int zz_compress_all( int nsrc , char *src , char **dest ) ^ zfun.c:426:44: warning: passing 'byte *' (aka 'unsigned char *') to parameter of type 'char *' converts between pointers to integer types with different sign [-Wpointer-sign] nxy2 = (float)zz_compress_all( 2*nbar , qbuf , NULL ) ; ^~~~ zfun.c:179:39: note: passing argument to parameter 'src' here int zz_compress_all( int nsrc , char *src , char **dest ) ^ 11 warnings generated. /bin/rm -f cs_pv.o cc -O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA -DPIC -fPIC -O3 -c cs_pv.c -I. -I/usr/local/include -Icoxplot -Inifti/nifti2 -Inifti/niftilib -Inifti/nifticdf -Inifti/znzlib -I3DEdge/src -Irickr -Ileej3 -DHAVE_ZLIB -DHAVE_GIFTI -If2c /bin/rm -f cs_sort_iv.o cc -O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA -DPIC -fPIC -O3 -c cs_sort_iv.c -I. -I/usr/local/include -Icoxplot -Inifti/nifti2 -Inifti/niftilib -Inifti/nifticdf -Inifti/znzlib -I3DEdge/src -Irickr -Ileej3 -DHAVE_ZLIB -DHAVE_GIFTI -If2c /bin/rm -f cs_sort_d.o cc -O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA -DPIC -fPIC -O3 -c cs_sort_d.c -I. -I/usr/local/include -Icoxplot -Inifti/nifti2 -Inifti/niftilib -Inifti/nifticdf -Inifti/znzlib -I3DEdge/src -Irickr -Ileej3 -DHAVE_ZLIB -DHAVE_GIFTI -If2c /bin/rm -f cs_fgets.o cc -O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA -DPIC -fPIC -c cs_fgets.c -I. -I/usr/local/include -Icoxplot -Inifti/nifti2 -Inifti/niftilib -Inifti/nifticdf -Inifti/znzlib -I3DEdge/src -Irickr -Ileej3 -DHAVE_ZLIB -DHAVE_GIFTI -If2c cc -O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA -DPIC -fPIC -O3 -c svdlib.c -I. -I/usr/local/include -Icoxplot -Inifti/nifti2 -Inifti/niftilib -Inifti/nifticdf -Inifti/znzlib -I3DEdge/src -Irickr -Ileej3 -DHAVE_ZLIB -DHAVE_GIFTI -If2c svdlib.c:922:31: warning: if statement has empty body [-Wempty-body] if (!fgets(line, 128, file)); ^ svdlib.c:922:31: note: put the semicolon on a separate line to silence this warning svdlib.c:924:31: warning: if statement has empty body [-Wempty-body] if (!fgets(line, 128, file)); ^ svdlib.c:924:31: note: put the semicolon on a separate line to silence this warning svdlib.c:937:31: warning: if statement has empty body [-Wempty-body] if (!fgets(line, 128, file)); ^ svdlib.c:937:31: note: put the semicolon on a separate line to silence this warning 3 warnings generated. /bin/rm -f cs_gamfit.o cc -O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA -DPIC -fPIC -c cs_gamfit.c -I. -I/usr/local/include -Icoxplot -Inifti/nifti2 -Inifti/niftilib -Inifti/nifticdf -Inifti/znzlib -I3DEdge/src -Irickr -Ileej3 -DHAVE_ZLIB -DHAVE_GIFTI -If2c /bin/rm -f cs_sort_str.o cc -O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA -DPIC -fPIC -O3 -c cs_sort_str.c -I. -I/usr/local/include -Icoxplot -Inifti/nifti2 -Inifti/niftilib -Inifti/nifticdf -Inifti/znzlib -I3DEdge/src -Irickr -Ileej3 -DHAVE_ZLIB -DHAVE_GIFTI -If2c /bin/rm -f cs_playsound.o cc -O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA -DPIC -fPIC -c cs_playsound.c -I./Audio -I. -I/usr/local/include -Icoxplot -Inifti/nifti2 -Inifti/niftilib -Inifti/nifticdf -Inifti/znzlib -I3DEdge/src -Irickr -Ileej3 -DHAVE_ZLIB -DHAVE_GIFTI -If2c ( cd eispack/ ; gmake all 'CC=cc -O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA -DPIC -fPIC -O3' 'CCSVD=cc -O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA -DPIC -fPIC -O0' ; /bin/mv -f *.o .. ; ) gmake[2]: Entering directory '/wrkdirs/usr/ports/science/afni/work/afni-AFNI_21.2.09/src/eispack' cc -O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA -DPIC -fPIC -O3 -I../f2c -c eis_bakvec.c cc -O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA -DPIC -fPIC -O3 -I../f2c -c eis_balanc.c cc -O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE 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eis_trbak1.c cc -O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA -DPIC -fPIC -O3 -I../f2c -c eis_trbak3.c cc -O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA -DPIC -fPIC -O3 -I../f2c -c eis_tred1.c cc -O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA -DPIC -fPIC -O3 -I../f2c -c eis_tred2.c cc -O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA -DPIC -fPIC -O3 -I../f2c -c eis_tred3.c cc -O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA -DPIC -fPIC -O3 -I../f2c -c eis_tridib.c cc -O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA -DPIC -fPIC -O3 -I../f2c -c eis_tsturm.c gmake[2]: Leaving directory '/wrkdirs/usr/ports/science/afni/work/afni-AFNI_21.2.09/src/eispack' /bin/rm -f suma_afni_surface.o cc -O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA -DPIC -fPIC -c suma_afni_surface.c -I. -I/usr/local/include -Icoxplot -Inifti/nifti2 -Inifti/niftilib -Inifti/nifticdf -Inifti/znzlib -I3DEdge/src -Irickr -Ileej3 -DHAVE_ZLIB -DHAVE_GIFTI -If2c /bin/rm -f suma_datasets.o cc -O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA -DPIC -fPIC -c suma_datasets.c -o suma_datasets.o -ISUMA/ -I. -I/usr/local/include -Icoxplot -Inifti/nifti2 -Inifti/niftilib -Inifti/nifticdf -Inifti/znzlib -I3DEdge/src -Irickr -Ileej3 -DHAVE_ZLIB -DHAVE_GIFTI -If2c suma_datasets.c:10454:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (nfixed = SUMA_FloatScanDset(dset, 1, 1, 1, 0)) { ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ suma_datasets.c:10454:18: note: place parentheses around the assignment to silence this warning if (nfixed = SUMA_FloatScanDset(dset, 1, 1, 1, 0)) { ^ ( ) suma_datasets.c:10454:18: note: use '==' to turn this assignment into an equality comparison if (nfixed = SUMA_FloatScanDset(dset, 1, 1, 1, 0)) { ^ == suma_datasets.c:14741:23: warning: unsequenced modification and access to 'tt' [-Wunsequenced] if (!((tt = (1+sqrt(1+8*nseg))/2.0) == (int)tt)) { ^ ~~ suma_datasets.c:14748:23: warning: unsequenced modification and access to 'tt' [-Wunsequenced] if (!((tt = (-1+sqrt(1+8*nseg))/2.0) == (int)tt)) { ^ ~~ suma_datasets.c:14755:23: warning: unsequenced modification and access to 'tt' [-Wunsequenced] if (!((tt = sqrt(SDSET_VECLEN(dset))) == (int)tt)) { ^ ~~ suma_datasets.c:14776:32: warning: unsequenced modification and access to 'tt' [-Wunsequenced] ((!i0 && !i1) && (tt = (1+sqrt(1+8*nseg))/2.0) == (int)tt)) { ^ ~~ suma_datasets.c:14791:39: warning: unsequenced modification and access to 'tt' [-Wunsequenced] ((!i0 && !i1) && (tt = (-1+sqrt(1+8*nseg))/2.0) == (int)tt)) { ^ ~~ suma_datasets.c:14809:39: warning: unsequenced modification and access to 'tt' [-Wunsequenced] ((!i0 && !i1) && (tt = sqrt(SDSET_VECLEN(dset))) == (int)tt)) { ^ ~~ suma_datasets.c:14876:17: warning: unsequenced modification and access to 'tt' [-Wunsequenced] if ((tt=SDSET_VECLEN(dset)/(msz[0]*msz[1])) != (int)tt) { ^ ~~ 8 warnings generated. /bin/rm -f suma_utils.o cc -O2 -pipe -fcommon -DLIBICONV_PLUG -fstack-protector-strong -fno-strict-aliasing -Wno-return-type -Wno-switch -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA -DPIC -fPIC -c suma_utils.c -o suma_utils.o -ISUMA/ -I. -I/usr/local/include -Icoxplot -Inifti/nifti2 -Inifti/niftilib -Inifti/nifticdf -Inifti/znzlib -I3DEdge/src -Irickr -Ileej3 -DHAVE_ZLIB -DHAVE_GIFTI -If2c suma_utils.c:2268:37: warning: implicit conversion from 'long' to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-int-float-conversion] if ((errno == ERANGE &&(*valp == LONG_MAX || *valp == LONG_MIN)) ~~ ^~~~~~~~ /usr/include/sys/limits.h:64:18: note: expanded from macro 'LONG_MAX' #define LONG_MAX __LONG_MAX /* max for a long */ ^~~~~~~~~~ /usr/include/machine/_limits.h:58:20: note: expanded from macro '__LONG_MAX' #define __LONG_MAX 0x7fffffffffffffffL /* max for a long */ ^~~~~~~~~~~~~~~~~~~ suma_utils.c:3048:10: error: statement requires expression of scalar type ('va_list' (aka '__builtin_va_list') invalid) if (vararg_ptr) { ^ ~~~~~~~~~~ 1 warning and 1 error generated. gmake[1]: *** [Makefile.INCLUDE:2102: suma_utils.o] Error 1 gmake[1]: Leaving directory '/wrkdirs/usr/ports/science/afni/work/afni-AFNI_21.2.09/src' *** Error code 1 Stop. make: stopped in /usr/ports/science/afni
