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Maintainer: [email protected] Log URL: https://pkg-status.freebsd.org/ampere1/data/141releng-armv7-quarterly/2e2d801cf977/logs/py311-pywgsim-0.5.2_1.log Build URL: https://pkg-status.freebsd.org/ampere1/build.html?mastername=141releng-armv7-quarterly&build=2e2d801cf977 Log: =>> Building biology/py-pywgsim build started at Fri Nov 15 09:08:23 UTC 2024 port directory: /usr/ports/biology/py-pywgsim package name: py311-pywgsim-0.5.2_1 building for: FreeBSD 141releng-armv7-quarterly-job-03 14.1-RELEASE-p6 FreeBSD 14.1-RELEASE-p6 1401000 arm maintained by: [email protected] Makefile datestamp: -rw-r--r-- 1 root wheel 492 Oct 15 01:02 /usr/ports/biology/py-pywgsim/Makefile Ports top last git commit: 2e2d801cf Ports top unclean checkout: no Port dir last git commit: db5128afd Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.2 Host OSVERSION: 1500023 Jail OSVERSION: 1401000 Job Id: 03 ---Begin Environment--- SHELL=/bin/sh OSVERSION=1401000 UNAME_v=FreeBSD 14.1-RELEASE-p6 1401000 UNAME_r=14.1-RELEASE-p6 BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.2 MASTERMNT=/usr/local/poudriere/data/.m/141releng-armv7-quarterly/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/141releng-armv7-quarterly/03/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=141releng-armv7-quarterly SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/141releng-armv7-quarterly/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.2 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR=py311 MAKE_ARGS= FLAVOR=py311 ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- [email protected] --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PYTHON="/usr/local/bin/python3.11" XDG_DATA_HOME=/wrkdirs/usr/ports/biology/py-pywgsim/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/py-pywgsim/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/py-pywgsim/work-py311/.cache HOME=/wrkdirs/usr/ports/biology/py-pywgsim/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/py-pywgsim/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/py-pywgsim/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/biology/py-pywgsim/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/py-pywgsim/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/py-pywgsim/work-py311/.cache HOME=/wrkdirs/usr/ports/biology/py-pywgsim/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/py-pywgsim/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/py-pywgsim/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " BSD_INSTALL_PROGRAM="install -s -m 555 " BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PYTHON_INCLUDEDIR=include/python3.11 PYTHON_LIBDIR=lib/python3.11 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_EXT_SUFFIX=.cpython-311 PYTHON_VER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" OSREL=14.1 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/pywgsim" EXAMPLESDIR="share/examples/pywgsim" DATADIR="share/pywgsim" WWWDIR="www/pywgsim" ETCDIR="etc/pywgsim" --End PLIST_SUB-- --SUB_LIST-- PYTHON_INCLUDEDIR=/usr/local/include/python3.11 PYTHON_LIBDIR=/usr/local/lib/python3.11 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=/usr/local/lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_EXT_SUFFIX=.cpython-311 PYTHON_VER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/pywgsim DOCSDIR=/usr/local/share/doc/pywgsim EXAMPLESDIR=/usr/local/share/examples/pywgsim WWWDIR=/usr/local/www/pywgsim ETCDIR=/usr/local/etc/pywgsim --End SUB_LIST-- ---Begin make.conf--- # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs MAKE_JOBS_NUMBER=3 USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs MAKE_JOBS_NUMBER=3 #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 524288 stack size (kbytes, -s) 65536 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License MIT accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-pywgsim-0.5.2_1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.21.3.pkg [141releng-armv7-quarterly-job-03] Installing pkg-1.21.3... [141releng-armv7-quarterly-job-03] Extracting pkg-1.21.3: .......... done ===> py311-pywgsim-0.5.2_1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py311-pywgsim-0.5.2_1 =========================================================================== =======================<phase: fetch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: fetch >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License MIT accepted by the user ===> Fetching all distfiles required by py311-pywgsim-0.5.2_1 for building =========================================================================== =======================<phase: checksum >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License MIT accepted by the user ===> Fetching all distfiles required by py311-pywgsim-0.5.2_1 for building => SHA256 Checksum OK for pywgsim-0.5.2.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: extract >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License MIT accepted by the user ===> Fetching all distfiles required by py311-pywgsim-0.5.2_1 for building ===> Extracting for py311-pywgsim-0.5.2_1 => SHA256 Checksum OK for pywgsim-0.5.2.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: patch >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for py311-pywgsim-0.5.2_1 =========================================================================== =======================<phase: build-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-pywgsim-0.5.2_1 depends on executable: cython-3.11 - not found ===> Installing existing package /packages/All/py311-cython-0.29.37_1.pkg [141releng-armv7-quarterly-job-03] Installing py311-cython-0.29.37_1... [141releng-armv7-quarterly-job-03] `-- Installing py311-setuptools-63.1.0_1... [141releng-armv7-quarterly-job-03] | `-- Installing python311-3.11.10... [141releng-armv7-quarterly-job-03] | | `-- Installing gettext-runtime-0.22.5... [141releng-armv7-quarterly-job-03] | | `-- Installing indexinfo-0.3.1... [141releng-armv7-quarterly-job-03] | | `-- Extracting indexinfo-0.3.1: .... done [141releng-armv7-quarterly-job-03] | | `-- Extracting gettext-runtime-0.22.5: .......... done [141releng-armv7-quarterly-job-03] | | `-- Installing libffi-3.4.6... [141releng-armv7-quarterly-job-03] | | `-- Extracting libffi-3.4.6: .......... done [141releng-armv7-quarterly-job-03] | | `-- Installing mpdecimal-4.0.0... [141releng-armv7-quarterly-job-03] | | `-- Extracting mpdecimal-4.0.0: .......... done [141releng-armv7-quarterly-job-03] | | `-- Installing readline-8.2.13_1... [141releng-armv7-quarterly-job-03] | | `-- Extracting readline-8.2.13_1: .......... done [141releng-armv7-quarterly-job-03] | `-- Extracting python311-3.11.10: .......... done [141releng-armv7-quarterly-job-03] `-- Extracting py311-setuptools-63.1.0_1: .......... done [141releng-armv7-quarterly-job-03] Extracting py311-cython-0.29.37_1: .......... done ===== Message from python311-3.11.10: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py311-gdbm databases/py-gdbm@py311 py311-sqlite3 databases/py-sqlite3@py311 py311-tkinter x11-toolkits/py-tkinter@py311 ===> py311-pywgsim-0.5.2_1 depends on executable: cython-3.11 - found ===> Returning to build of py311-pywgsim-0.5.2_1 ===> py311-pywgsim-0.5.2_1 depends on package: py311-setuptools>=63.1.0 - found ===> py311-pywgsim-0.5.2_1 depends on file: /usr/local/bin/python3.11 - found =========================================================================== =======================<phase: lib-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: configure >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Configuring for py311-pywgsim-0.5.2_1 running config cython-3.11 /wrkdirs/usr/ports/biology/py-pywgsim/work-py311/pywgsim-0.5.2/pywgsim/wgsim_lib.pyx /usr/local/lib/python3.11/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /wrkdirs/usr/ports/biology/py-pywgsim/work-py311/pywgsim-0.5.2/pywgsim/wgsim_lib.pyx tree = Parsing.p_module(s, pxd, full_module_name) =========================================================================== =======================<phase: build >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building for py311-pywgsim-0.5.2_1 running build running build_py creating build creating build/lib.freebsd-14.1-RELEASE-p6-arm-cpython-311 creating build/lib.freebsd-14.1-RELEASE-p6-arm-cpython-311/pywgsim copying pywgsim/main.py -> build/lib.freebsd-14.1-RELEASE-p6-arm-cpython-311/pywgsim copying pywgsim/__main__.py -> build/lib.freebsd-14.1-RELEASE-p6-arm-cpython-311/pywgsim copying pywgsim/__init__.py -> build/lib.freebsd-14.1-RELEASE-p6-arm-cpython-311/pywgsim running egg_info writing pywgsim.egg-info/PKG-INFO writing dependency_links to pywgsim.egg-info/dependency_links.txt writing entry points to pywgsim.egg-info/entry_points.txt writing requirements to pywgsim.egg-info/requires.txt writing top-level names to pywgsim.egg-info/top_level.txt reading manifest file 'pywgsim.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'pywgsim.egg-info/SOURCES.txt' /usr/local/lib/python3.11/site-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: Installing 'pywgsim.src' as data is deprecated, please list it in `packages`. !! ############################ # Package would be ignored # ############################ Python recognizes 'pywgsim.src' as an importable package, but it is not listed in the `packages` configuration of setuptools. 'pywgsim.src' has been automatically added to the distribution only because it may contain data files, but this behavior is likely to change in future versions of setuptools (and therefore is considered deprecated). Please make sure that 'pywgsim.src' is included as a package by using the `packages` configuration field or the proper discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" and "data files" on setuptools documentation page. !! check.warn(importable) copying pywgsim/wgsim_lib.c -> build/lib.freebsd-14.1-RELEASE-p6-arm-cpython-311/pywgsim copying pywgsim/wgsim_lib.pyx -> build/lib.freebsd-14.1-RELEASE-p6-arm-cpython-311/pywgsim creating build/lib.freebsd-14.1-RELEASE-p6-arm-cpython-311/pywgsim/src copying pywgsim/src/Makefile -> build/lib.freebsd-14.1-RELEASE-p6-arm-cpython-311/pywgsim/src copying pywgsim/src/kseq.h -> build/lib.freebsd-14.1-RELEASE-p6-arm-cpython-311/pywgsim/src copying pywgsim/src/wgsim_mod.c -> build/lib.freebsd-14.1-RELEASE-p6-arm-cpython-311/pywgsim/src copying pywgsim/src/wgsim_mod.h -> build/lib.freebsd-14.1-RELEASE-p6-arm-cpython-311/pywgsim/src running build_ext building 'pywgsim.wgsim' extension creating build/temp.freebsd-14.1-RELEASE-p6-arm-cpython-311 creating build/temp.freebsd-14.1-RELEASE-p6-arm-cpython-311/pywgsim creating build/temp.freebsd-14.1-RELEASE-p6-arm-cpython-311/pywgsim/src cc -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -Ipywgsim/src -I/usr/local/include/python3.11 -c pywgsim/src/wgsim_mod.c -o build/temp.freebsd-14.1-RELEASE-p6-arm-cpython-311/pywgsim/src/wgsim_mod.o pywgsim/src/wgsim_mod.c:41:1: warning: comparison of integers of different signs: 'size_t' (aka 'unsigned int') and 'int' [-Wsign-compare] 41 | KSEQ_INIT(gzFile, gzread) | ^~~~~~~~~~~~~~~~~~~~~~~~~ pywgsim/src/kseq.h:220:2: note: expanded from macro 'KSEQ_INIT' 220 | KSTREAM_INIT(type_t, __read, 4096) \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pywgsim/src/kseq.h:145:2: note: expanded from macro 'KSTREAM_INIT' 145 | __KS_GETUNTIL(__read, __bufsize) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pywgsim/src/kseq.h:120:24: note: expanded from macro '__KS_GETUNTIL' 120 | if (str->m - str->l < i - ks->begin + 1) { \ | ~~~~~~~~~~~~~~~ ^ ~~~~~~~~~~~~~~~~~ pywgsim/src/wgsim_mod.c:114:16: warning: comparison of integers of different signs: 'int' and 'const size_t' (aka 'const unsigned int') [-Wsign-compare] 114 | for (i = 0; i != ks->seq.l; ++i) { | ~ ^ ~~~~~~~~~ pywgsim/src/wgsim_mod.c:170:16: warning: comparison of integers of different signs: 'int' and 'const size_t' (aka 'const unsigned int') [-Wsign-compare] 170 | for (i = 0; i != ks->seq.l; ++i) { | ~ ^ ~~~~~~~~~ pywgsim/src/wgsim_mod.c:192:21: warning: comparison of integers of different signs: 'int' and 'const size_t' (aka 'const unsigned int') [-Wsign-compare] 192 | for (j = i; j < ks->seq.l && hap1->s[j] == hap2->s[j] && (hap1->s[j]&mutmsk) == DELETE; ++j) | ~ ^ ~~~~~~~~~ pywgsim/src/wgsim_mod.c:221:21: warning: comparison of integers of different signs: 'int' and 'const size_t' (aka 'const unsigned int') [-Wsign-compare] 221 | for (j = i; j < ks->seq.l && hap1->s[j] != hap2->s[j] && (hap1->s[j]&mutmsk) == DELETE; ++j) | ~ ^ ~~~~~~~~~ pywgsim/src/wgsim_mod.c:231:21: warning: comparison of integers of different signs: 'int' and 'const size_t' (aka 'const unsigned int') [-Wsign-compare] 231 | for (j = i; j < ks->seq.l && hap1->s[j] != hap2->s[j] && (hap2->s[j]&mutmsk) == DELETE; ++j) | ~ ^ ~~~~~~~~~ pywgsim/src/wgsim_mod.c:341:56: warning: comparison of integers of different signs: 'int' and 'size_t' (aka 'unsigned int') [-Wsign-compare] 341 | } while (pos < 0 || pos >= ks->seq.l || pos + d - 1 >= ks->seq.l); | ~~~~~~~~~~~ ^ ~~~~~~~~~ pywgsim/src/wgsim_mod.c:341:28: warning: comparison of integers of different signs: 'int' and 'size_t' (aka 'unsigned int') [-Wsign-compare] 341 | } while (pos < 0 || pos >= ks->seq.l || pos + d - 1 >= ks->seq.l); | ~~~ ^ ~~~~~~~~~ pywgsim/src/wgsim_mod.c:379:4: warning: comparison of integers of different signs: 'int' and 'size_t' (aka 'unsigned int') [-Wsign-compare] 379 | __gen_read(0, pos, ++i); | ^~~~~~~~~~~~~~~~~~~~~~~ pywgsim/src/wgsim_mod.c:358:61: note: expanded from macro '__gen_read' 358 | for (i = (start), k = 0, ext_coor[x] = -10; i >= 0 && i < ks->seq.l && k < s[x]; iter) { \ | ~ ^ ~~~~~~~~~ pywgsim/src/wgsim_mod.c:380:4: warning: comparison of integers of different signs: 'int' and 'size_t' (aka 'unsigned int') [-Wsign-compare] 380 | __gen_read(1, pos + d - 1, --i); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pywgsim/src/wgsim_mod.c:358:61: note: expanded from macro '__gen_read' 358 | for (i = (start), k = 0, ext_coor[x] = -10; i >= 0 && i < ks->seq.l && k < s[x]; iter) { \ | ~ ^ ~~~~~~~~~ 10 warnings generated. cc -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -Ipywgsim/src -I/usr/local/include/python3.11 -c pywgsim/wgsim_lib.c -o build/temp.freebsd-14.1-RELEASE-p6-arm-cpython-311/pywgsim/wgsim_lib.o cc -shared -fstack-protector-strong -O2 -pipe -fstack-protector-strong -fno-strict-aliasing build/temp.freebsd-14.1-RELEASE-p6-arm-cpython-311/pywgsim/src/wgsim_mod.o build/temp.freebsd-14.1-RELEASE-p6-arm-cpython-311/pywgsim/wgsim_lib.o -L/usr/local/lib -lz -lm -o build/lib.freebsd-14.1-RELEASE-p6-arm-cpython-311/pywgsim/wgsim.cpython-311.so =========================================================================== =======================<phase: run-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-pywgsim-0.5.2_1 depends on package: py311-plac>=0 - not found ===> Installing existing package /packages/All/py311-plac-1.4.3.pkg [141releng-armv7-quarterly-job-03] Installing py311-plac-1.4.3... [141releng-armv7-quarterly-job-03] `-- Installing py311-argparse-1.4.0... [141releng-armv7-quarterly-job-03] `-- Extracting py311-argparse-1.4.0: .......... done [141releng-armv7-quarterly-job-03] Extracting py311-plac-1.4.3: .......... done ===> py311-pywgsim-0.5.2_1 depends on package: py311-plac>=0 - found ===> Returning to build of py311-pywgsim-0.5.2_1 ===> py311-pywgsim-0.5.2_1 depends on package: py311-setuptools>=63.1.0 - found ===> py311-pywgsim-0.5.2_1 depends on file: /usr/local/bin/python3.11 - found =========================================================================== =======================<phase: stage >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Staging for py311-pywgsim-0.5.2_1 ===> Generating temporary packing list /usr/local/lib/python3.11/site-packages/setuptools/_distutils/dist.py:257: UserWarning: Unknown distribution option: 'install_requires' /usr/local/lib/python3.11/site-packages/setuptools/_distutils/dist.py:257: UserWarning: Unknown distribution option: 'entry_points' /usr/local/lib/python3.11/site-packages/setuptools/_distutils/dist.py:257: UserWarning: Unknown distribution option: 'include_package_data' /usr/local/lib/python3.11/site-packages/setuptools/_distutils/dist.py:257: UserWarning: Unknown distribution option: 'python_requires' Traceback (most recent call last): File "<string>", line 1, in <module> File "setup.py", line 34, in <module> setup( File "/usr/local/lib/python3.11/site-packages/setuptools/__init__.py", line 87, in setup File "/usr/local/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 151, in setup File "/usr/local/lib/python3.11/site-packages/setuptools/dist.py", line 868, in parse_config_files File "/usr/local/lib/python3.11/site-packages/setuptools/config/pyprojecttoml.py", line 58, in apply_configuration File "/usr/local/lib/python3.11/site-packages/setuptools/config/pyprojecttoml.py", line 94, in read_configuration File "/usr/local/lib/python3.11/site-packages/setuptools/config/pyprojecttoml.py", line 27, in load_file File "/usr/local/lib/python3.11/site-packages/setuptools/extern/__init__.py", line 52, in create_module File "/usr/local/lib/python3.11/site-packages/setuptools/extern/__init__.py", line 44, in load_module ImportError: The 'tomli' package is required; normally this is bundled with this package so if you get this warning, consult the packager of your distribution. *** Error code 1 Stop. make: stopped in /usr/ports/biology/py-pywgsim
