You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     y...@freebsd.org
Log URL:        
https://pkg-status.freebsd.org/ampere1/data/133arm64-quarterly/4045cf197ce4/logs/coverm-0.7.0.log
Build URL:      
https://pkg-status.freebsd.org/ampere1/build.html?mastername=133arm64-quarterly&build=4045cf197ce4
Log:

=>> Building biology/coverm
build started at Fri Nov 29 00:47:22 UTC 2024
port directory: /usr/ports/biology/coverm
package name: coverm-0.7.0
building for: FreeBSD 133arm64-quarterly-job-12 13.3-RELEASE-p8 FreeBSD 
13.3-RELEASE-p8 arm64
maintained by: y...@freebsd.org
Makefile datestamp: -rw-r--r--  1 root  wheel  5708 Oct 15 01:02 
/usr/ports/biology/coverm/Makefile
Ports top last git commit: 4045cf197
Ports top unclean checkout: no
Port dir last git commit: db5128afd
Port dir unclean checkout: no
Poudriere version: poudriere-git-3.4.2
Host OSVERSION: 1500027
Jail OSVERSION: 1303001
Job Id: 12

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1303001
UNAME_v=FreeBSD 13.3-RELEASE-p8
UNAME_r=13.3-RELEASE-p8
BLOCKSIZE=K
MAIL=/var/mail/root
MM_CHARSET=UTF-8
LANG=C.UTF-8
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
MAKE_OBJDIR_CHECK_WRITABLE=0
LOCALBASE=/usr/local
USER=root
POUDRIERE_NAME=poudriere-git
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.4.2
MASTERMNT=/usr/local/poudriere/data/.m/133arm64-quarterly/ref
LC_COLLATE=C
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
OUTPUT_REDIRECTED_STDERR=4
OUTPUT_REDIRECTED=1
PWD=/usr/local/poudriere/data/.m/133arm64-quarterly/12/.p
OUTPUT_REDIRECTED_STDOUT=3
P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS
MASTERNAME=133arm64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
SCRIPTNAME=bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/133arm64-quarterly/ref/.p/pool
POUDRIERE_PKGNAME=poudriere-git-3.4.2
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
PKG_CONFIG=pkgconf XDG_DATA_HOME=/wrkdirs/usr/ports/biology/coverm/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/coverm/work  
XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/coverm/work/.cache  
HOME=/wrkdirs/usr/ports/biology/coverm/work 
TMPDIR="/wrkdirs/usr/ports/biology/coverm/work" 
PATH=/wrkdirs/usr/ports/biology/coverm/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 
PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/coverm/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/coverm/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/coverm/work  
XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/coverm/work/.cache  
HOME=/wrkdirs/usr/ports/biology/coverm/work 
TMPDIR="/wrkdirs/usr/ports/biology/coverm/work" 
PATH=/wrkdirs/usr/ports/biology/coverm/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 
PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/coverm/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig
 MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  " BSD_INSTALL_PROGRAM="install  
-s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  
-m 555"  BSD_INSTA
LL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
OSREL=13.3 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local LIB32DIR=lib 
DOCSDIR="share/doc/coverm"  EXAMPLESDIR="share/examples/coverm"  
DATADIR="share/coverm"  WWWDIR="www/coverm"  ETCDIR="etc/coverm"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/coverm 
DOCSDIR=/usr/local/share/doc/coverm 
EXAMPLESDIR=/usr/local/share/examples/coverm  WWWDIR=/usr/local/www/coverm 
ETCDIR=/usr/local/etc/coverm
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
####  ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs
MAKE_JOBS_NUMBER=3
#### Misc Poudriere ####
.include "/etc/make.conf.ports_env"
GID=0
UID=0
---End make.conf---
--Resource limits--
cpu time               (seconds, -t)  unlimited
file size           (512-blocks, -f)  unlimited
data seg size           (kbytes, -d)  1048576
stack size              (kbytes, -s)  1048576
core file size      (512-blocks, -c)  unlimited
max memory size         (kbytes, -m)  unlimited
locked memory           (kbytes, -l)  unlimited
max user processes              (-u)  89999
open files                      (-n)  8192
virtual mem size        (kbytes, -v)  unlimited
swap limit              (kbytes, -w)  unlimited
socket buffer size       (bytes, -b)  unlimited
pseudo-terminals                (-p)  unlimited
kqueues                         (-k)  unlimited
umtx shared locks               (-o)  unlimited
--End resource limits--
=======================<phase: check-sanity   >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===>  License AGPLv3 accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===>   coverm-0.7.0 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.21.3.pkg
[133arm64-quarterly-job-12] Installing pkg-1.21.3...
[133arm64-quarterly-job-12] Extracting pkg-1.21.3: .......... done
===>   coverm-0.7.0 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of coverm-0.7.0
===========================================================================
=======================<phase: fetch-depends  >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: fetch          >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===>  License AGPLv3 accepted by the user
===> Fetching all distfiles required by coverm-0.7.0 for building
===========================================================================
=======================<phase: checksum       >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===>  License AGPLv3 accepted by the user
===> Fetching all distfiles required by coverm-0.7.0 for building
=> SHA256 Checksum OK for rust/crates/addr2line-0.24.2.crate.
=> SHA256 Checksum OK for rust/crates/adler2-2.0.0.crate.
=> SHA256 Checksum OK for rust/crates/aho-corasick-1.1.3.crate.
=> SHA256 Checksum OK for rust/crates/ansi_term-0.12.1.crate.
=> SHA256 Checksum OK for rust/crates/anstream-0.6.15.crate.
=> SHA256 Checksum OK for rust/crates/anstyle-1.0.8.crate.
=> SHA256 Checksum OK for rust/crates/anstyle-parse-0.2.5.crate.
=> SHA256 Checksum OK for rust/crates/anstyle-query-1.1.1.crate.
=> SHA256 Checksum OK for rust/crates/anstyle-wincon-3.0.4.crate.
=> SHA256 Checksum OK for rust/crates/anyhow-1.0.89.crate.
=> SHA256 Checksum OK for rust/crates/approx-0.5.1.crate.
=> SHA256 Checksum OK for rust/crates/assert_cli-0.6.3.crate.
=> SHA256 Checksum OK for rust/crates/atty-0.2.14.crate.
=> SHA256 Checksum OK for rust/crates/autocfg-1.4.0.crate.
=> SHA256 Checksum OK for rust/crates/backtrace-0.3.74.crate.
=> SHA256 Checksum OK for rust/crates/bincode-1.3.3.crate.
=> SHA256 Checksum OK for rust/crates/bio-1.6.0.crate.
=> SHA256 Checksum OK for rust/crates/bio-types-1.0.4.crate.
=> SHA256 Checksum OK for rust/crates/bird_tool_utils-0.5.1.crate.
=> SHA256 Checksum OK for rust/crates/bird_tool_utils-man-0.4.0.crate.
=> SHA256 Checksum OK for rust/crates/bit-set-0.5.3.crate.
=> SHA256 Checksum OK for rust/crates/bit-vec-0.5.1.crate.
=> SHA256 Checksum OK for rust/crates/bit-vec-0.6.3.crate.
=> SHA256 Checksum OK for rust/crates/bitflags-1.3.2.crate.
=> SHA256 Checksum OK for rust/crates/bitflags-2.6.0.crate.
=> SHA256 Checksum OK for rust/crates/buf_redux-0.8.4.crate.
=> SHA256 Checksum OK for rust/crates/buffer-redux-1.0.2.crate.
=> SHA256 Checksum OK for rust/crates/bv-0.11.1.crate.
=> SHA256 Checksum OK for rust/crates/bytecount-0.6.8.crate.
=> SHA256 Checksum OK for rust/crates/bytemuck-1.18.0.crate.
=> SHA256 Checksum OK for rust/crates/byteorder-1.5.0.crate.
=> SHA256 Checksum OK for rust/crates/bzip2-0.4.4.crate.
=> SHA256 Checksum OK for rust/crates/bzip2-sys-0.1.11+1.0.8.crate.
=> SHA256 Checksum OK for rust/crates/capnp-0.14.11.crate.
=> SHA256 Checksum OK for rust/crates/cargo-husky-1.5.0.crate.
=> SHA256 Checksum OK for rust/crates/cc-1.1.24.crate.
=> SHA256 Checksum OK for rust/crates/cfg-if-1.0.0.crate.
=> SHA256 Checksum OK for rust/crates/checkm-0.2.0.crate.
=> SHA256 Checksum OK for rust/crates/clap-3.2.25.crate.
=> SHA256 Checksum OK for rust/crates/clap-4.5.19.crate.
=> SHA256 Checksum OK for rust/crates/clap_builder-4.5.19.crate.
=> SHA256 Checksum OK for rust/crates/clap_complete-4.5.32.crate.
=> SHA256 Checksum OK for rust/crates/clap_lex-0.2.4.crate.
=> SHA256 Checksum OK for rust/crates/clap_lex-0.7.2.crate.
=> SHA256 Checksum OK for rust/crates/cmake-0.1.51.crate.
=> SHA256 Checksum OK for rust/crates/colorchoice-1.0.2.crate.
=> SHA256 Checksum OK for rust/crates/colored-1.9.4.crate.
=> SHA256 Checksum OK for rust/crates/concurrent-queue-2.5.0.crate.
<snip>
[hts-sys 2.1.4] exit status: 0
[hts-sys 2.1.4] exit status: 0
[hts-sys 2.1.4] exit status: 0
warning: `nix` (lib) generated 9 warnings
   Compiling tempdir v0.3.7
     Running `CARGO=/usr/local/bin/cargo CARGO_CRATE_NAME=tempdir 
CARGO_MANIFEST_DIR=/wrkdirs/usr/ports/biology/coverm/work/CoverM-0.7.0/cargo-crates/tempdir-0.3.7
 CARGO_PKG_AUTHORS='The Rust Project Developers' CARGO_PKG_DESCRIPTION='A 
library for managing a temporary directory and deleting all contents when 
it'\''s
dropped.
' CARGO_PKG_HOMEPAGE='https://github.com/rust-lang/tempdir' 
CARGO_PKG_LICENSE=MIT/Apache-2.0 CARGO_PKG_LICENSE_FILE='' 
CARGO_PKG_NAME=tempdir CARGO_PKG_README=README.md 
CARGO_PKG_REPOSITORY='https://github.com/rust-lang/tempdir' 
CARGO_PKG_RUST_VERSION='' CARGO_PKG_VERSION=0.3.7 CARGO_PKG_VERSION_MAJOR=0 
CARGO_PKG_VERSION_MINOR=3 CARGO_PKG_VERSION_PATCH=7 CARGO_PKG_VERSION_PRE='' 
LD_LIBRARY_PATH=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps 
/usr/local/bin/rustc --crate-name tempdir --edition=2015 
/wrkdirs/usr/ports/biology/coverm/work/CoverM-0.7.0/cargo-crates/tempdir-0.3.7/src/lib.rs
 --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat 
--crate-type lib --emit=dep-info,metadata,link -C opt-level=3 -C panic=abort -C 
linker-plugin-lto -C codegen-units=1 --check-cfg 'cfg(docsrs)' --check-cfg 
'cfg(feature, values())' -C metadata=cdb416188300f41c -C 
extra-filename=-cdb416188300f41c --out-dir 
/wrkdirs/usr/ports/biology/coverm/work/target/releas
e/deps -C strip=symbols -L 
dependency=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps --extern 
rand=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/librand-23b0e3a8f5224779.rmeta
 --extern 
remove_dir_all=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/libremove_dir_all-a0375dbe1e6b5a09.rmeta
 --cap-lints warn -C target-cpu= -C link-arg=-fstack-protector-strong`
   Compiling clap_complete v4.5.32
     Running `CARGO=/usr/local/bin/cargo CARGO_CRATE_NAME=clap_complete 
CARGO_MANIFEST_DIR=/wrkdirs/usr/ports/biology/coverm/work/CoverM-0.7.0/cargo-crates/clap_complete-4.5.32
 CARGO_PKG_AUTHORS='' CARGO_PKG_DESCRIPTION='Generate shell completion scripts 
for your clap::Command' CARGO_PKG_HOMEPAGE='' CARGO_PKG_LICENSE='MIT OR 
Apache-2.0' CARGO_PKG_LICENSE_FILE='' CARGO_PKG_NAME=clap_complete 
CARGO_PKG_README=README.md 
CARGO_PKG_REPOSITORY='https://github.com/clap-rs/clap' 
CARGO_PKG_RUST_VERSION=1.74 CARGO_PKG_VERSION=4.5.32 CARGO_PKG_VERSION_MAJOR=4 
CARGO_PKG_VERSION_MINOR=5 CARGO_PKG_VERSION_PATCH=32 CARGO_PKG_VERSION_PRE='' 
LD_LIBRARY_PATH=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps 
/usr/local/bin/rustc --crate-name clap_complete --edition=2021 
/wrkdirs/usr/ports/biology/coverm/work/CoverM-0.7.0/cargo-crates/clap_complete-4.5.32/src/lib.rs
 --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat 
--crate-type lib --emit=dep-info,metadata,l
ink -C opt-level=3 -C panic=abort -C linker-plugin-lto -C codegen-units=1 
--warn=rust_2018_idioms '--warn=clippy::zero_sized_map_values' 
'--warn=clippy::verbose_file_reads' --warn=unused_qualifications 
--warn=unused_macro_rules --warn=unused_lifetimes --warn=unsafe_op_in_unsafe_fn 
--warn=unreachable_pub '--warn=clippy::uninlined_format_args' 
'--warn=clippy::trait_duplication_in_bounds' '--warn=clippy::todo' 
'--warn=clippy::string_lit_as_bytes' '--warn=clippy::string_add_assign' 
'--warn=clippy::semicolon_if_nothing_returned' 
'--warn=clippy::self_named_module_files' 
'--warn=clippy::same_functions_in_if_condition' 
'--warn=clippy::rest_pat_in_fully_bound_structs' 
'--warn=clippy::ref_option_ref' '--warn=clippy::redundant_feature_names' 
'--warn=clippy::rc_mutex' '--warn=clippy::ptr_as_ptr' 
'--warn=clippy::path_buf_push_overwrite' 
'--warn=clippy::negative_feature_names' '--warn=clippy::needless_for_each' 
'--warn=clippy::needless_continue' '--warn=clippy::mutex_integer' '--allow=cli
ppy::multiple_bound_locations' '--warn=clippy::mem_forget' 
'--warn=clippy::macro_use_imports' '--warn=clippy::lossy_float_literal' 
'--warn=clippy::linkedlist' '--allow=clippy::let_and_return' 
'--warn=clippy::large_types_passed_by_value' 
'--warn=clippy::large_stack_arrays' '--warn=clippy::large_digit_groups' 
'--warn=clippy::invalid_upcast_comparisons' '--warn=clippy::infinite_loop' 
'--warn=clippy::inefficient_to_string' 
'--warn=clippy::inconsistent_struct_constructor' 
'--warn=clippy::imprecise_flops' '--warn=clippy::implicit_clone' 
'--allow=clippy::if_same_then_else' 
'--warn=clippy::from_iter_instead_of_collect' 
'--warn=clippy::fn_params_excessive_bools' '--warn=clippy::float_cmp_const' 
'--warn=clippy::flat_map_option' '--warn=clippy::filter_map_next' 
'--warn=clippy::fallible_impl_from' '--warn=clippy::explicit_into_iter_loop' 
'--warn=clippy::explicit_deref_methods' 
'--warn=clippy::expl_impl_clone_on_copy' '--warn=clippy::enum_glob_use' 
'--warn=clippy::empty_enum' '--warn=cli
ppy::doc_markdown' '--warn=clippy::debug_assert_with_mut_call' 
'--warn=clippy::dbg_macro' '--warn=clippy::create_dir' 
'--allow=clippy::collapsible_else_if' '--warn=clippy::checked_conversions' 
'--allow=clippy::branches_sharing_code' 
'--allow=clippy::bool_assert_comparison' '--allow=clippy::blocks_in_conditions' 
'--allow=clippy::assigning_clones' --cfg 'feature="default"' --check-cfg 
'cfg(docsrs)' --check-cfg 'cfg(feature, values("debug", "default", 
"unstable-doc", "unstable-dynamic", "unstable-shell-tests"))' -C 
metadata=45d6c09fbf4291bf -C extra-filename=-45d6c09fbf4291bf --out-dir 
/wrkdirs/usr/ports/biology/coverm/work/target/release/deps -C strip=symbols -L 
dependency=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps --extern 
clap=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/libclap-008c328d2fba1639.rmeta
 --cap-lints warn -C target-cpu= -C link-arg=-fstack-protector-strong`
   Compiling version-compare v0.1.1
     Running `CARGO=/usr/local/bin/cargo CARGO_CRATE_NAME=version_compare 
CARGO_MANIFEST_DIR=/wrkdirs/usr/ports/biology/coverm/work/CoverM-0.7.0/cargo-crates/version-compare-0.1.1
 CARGO_PKG_AUTHORS='Tim Visee <3a4fb3964f@sinenomine.email>' 
CARGO_PKG_DESCRIPTION='Rust library to easily compare version numbers with no 
specific format, and test against various comparison operators.' 
CARGO_PKG_HOMEPAGE='https://timvisee.com/projects/version-compare/' 
CARGO_PKG_LICENSE=MIT CARGO_PKG_LICENSE_FILE='' CARGO_PKG_NAME=version-compare 
CARGO_PKG_README=README.md 
CARGO_PKG_REPOSITORY='https://gitlab.com/timvisee/version-compare' 
CARGO_PKG_RUST_VERSION='' CARGO_PKG_VERSION=0.1.1 CARGO_PKG_VERSION_MAJOR=0 
CARGO_PKG_VERSION_MINOR=1 CARGO_PKG_VERSION_PATCH=1 CARGO_PKG_VERSION_PRE='' 
LD_LIBRARY_PATH=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps 
/usr/local/bin/rustc --crate-name version_compare --edition=2018 
/wrkdirs/usr/ports/biology/coverm/work/CoverM-0.7.0/cargo-crates/version
-compare-0.1.1/src/lib.rs --error-format=json 
--json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib 
--emit=dep-info,metadata,link -C opt-level=3 -C panic=abort -C 
linker-plugin-lto -C codegen-units=1 --check-cfg 'cfg(docsrs)' --check-cfg 
'cfg(feature, values())' -C metadata=2677f3f7b182d8a9 -C 
extra-filename=-2677f3f7b182d8a9 --out-dir 
/wrkdirs/usr/ports/biology/coverm/work/target/release/deps -C strip=symbols -L 
dependency=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps 
--cap-lints warn -C target-cpu= -C link-arg=-fstack-protector-strong`
warning: unexpected `cfg` condition name: `tarpaulin`
   --> 
/wrkdirs/usr/ports/biology/coverm/work/CoverM-0.7.0/cargo-crates/version-compare-0.1.1/src/cmp.rs:320:12
    |
320 | #[cfg_attr(tarpaulin, skip)]
    |            ^^^^^^^^^
    |
    = help: expected names are: `clippy`, `debug_assertions`, `doc`, `docsrs`, 
`doctest`, `feature`, `miri`, `overflow_checks`, `panic`, `proc_macro`, 
`relocation_model`, `rustfmt`, `sanitize`, `sanitizer_cfi_generalize_pointers`, 
`sanitizer_cfi_normalize_integers`, `target_abi`, `target_arch`, 
`target_endian`, `target_env`, `target_family`, `target_feature`, 
`target_has_atomic`, `target_has_atomic_equal_alignment`, 
`target_has_atomic_load_store`, `target_os`, `target_pointer_width`, 
`target_thread_local`, `target_vendor`, `test`, `ub_checks`, `unix`, and 
`windows`
    = help: consider using a Cargo feature instead
    = help: or consider adding in `Cargo.toml` the `check-cfg` lint config for 
the lint:
             [lints.rust]
             unexpected_cfgs = { level = "warn", check-cfg = ['cfg(tarpaulin)'] 
}
    = help: or consider adding 
`println!("cargo::rustc-check-cfg=cfg(tarpaulin)");` to the top of the 
`build.rs`
    = note: see 
<https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for 
more information about checking conditional configuration
    = note: `#[warn(unexpected_cfgs)]` on by default

warning: unexpected `cfg` condition name: `tarpaulin`
  --> 
/wrkdirs/usr/ports/biology/coverm/work/CoverM-0.7.0/cargo-crates/version-compare-0.1.1/src/compare.rs:66:12
   |
66 | #[cfg_attr(tarpaulin, skip)]
   |            ^^^^^^^^^
   |
   = help: consider using a Cargo feature instead
   = help: or consider adding in `Cargo.toml` the `check-cfg` lint config for 
the lint:
            [lints.rust]
            unexpected_cfgs = { level = "warn", check-cfg = ['cfg(tarpaulin)'] }
   = help: or consider adding 
`println!("cargo::rustc-check-cfg=cfg(tarpaulin)");` to the top of the 
`build.rs`
   = note: see 
<https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for 
more information about checking conditional configuration

warning: unexpected `cfg` condition name: `tarpaulin`
  --> 
/wrkdirs/usr/ports/biology/coverm/work/CoverM-0.7.0/cargo-crates/version-compare-0.1.1/src/manifest.rs:58:12
   |
58 | #[cfg_attr(tarpaulin, skip)]
   |            ^^^^^^^^^
   |
   = help: consider using a Cargo feature instead
   = help: or consider adding in `Cargo.toml` the `check-cfg` lint config for 
the lint:
            [lints.rust]
            unexpected_cfgs = { level = "warn", check-cfg = ['cfg(tarpaulin)'] }
   = help: or consider adding 
`println!("cargo::rustc-check-cfg=cfg(tarpaulin)");` to the top of the 
`build.rs`
   = note: see 
<https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for 
more information about checking conditional configuration

warning: unexpected `cfg` condition name: `tarpaulin`
  --> 
/wrkdirs/usr/ports/biology/coverm/work/CoverM-0.7.0/cargo-crates/version-compare-0.1.1/src/part.rs:34:12
   |
34 | #[cfg_attr(tarpaulin, skip)]
   |            ^^^^^^^^^
   |
   = help: consider using a Cargo feature instead
   = help: or consider adding in `Cargo.toml` the `check-cfg` lint config for 
the lint:
            [lints.rust]
            unexpected_cfgs = { level = "warn", check-cfg = ['cfg(tarpaulin)'] }
   = help: or consider adding 
`println!("cargo::rustc-check-cfg=cfg(tarpaulin)");` to the top of the 
`build.rs`
   = note: see 
<https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for 
more information about checking conditional configuration

warning: unexpected `cfg` condition name: `tarpaulin`
   --> 
/wrkdirs/usr/ports/biology/coverm/work/CoverM-0.7.0/cargo-crates/version-compare-0.1.1/src/version.rs:462:12
    |
462 | #[cfg_attr(tarpaulin, skip)]
    |            ^^^^^^^^^
    |
    = help: consider using a Cargo feature instead
    = help: or consider adding in `Cargo.toml` the `check-cfg` lint config for 
the lint:
             [lints.rust]
             unexpected_cfgs = { level = "warn", check-cfg = ['cfg(tarpaulin)'] 
}
    = help: or consider adding 
`println!("cargo::rustc-check-cfg=cfg(tarpaulin)");` to the top of the 
`build.rs`
    = note: see 
<https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for 
more information about checking conditional configuration

[hts-sys 2.1.4] exit status: 0
[hts-sys 2.1.4] exit status: 0
[hts-sys 2.1.4] exit status: 0
[hts-sys 2.1.4] exit status: 0
[hts-sys 2.1.4] exit status: 0
[hts-sys 2.1.4] exit status: 0
[hts-sys 2.1.4] exit status: 0
[hts-sys 2.1.4] exit status: 0
warning: `version-compare` (lib) generated 5 warnings
   Compiling roff v0.2.2
     Running `CARGO=/usr/local/bin/cargo CARGO_CRATE_NAME=roff 
CARGO_MANIFEST_DIR=/wrkdirs/usr/ports/biology/coverm/work/CoverM-0.7.0/cargo-crates/roff-0.2.2
 CARGO_PKG_AUTHORS='' CARGO_PKG_DESCRIPTION='ROFF (man page format) generation 
library' CARGO_PKG_HOMEPAGE='https://github.com/rust-cli/roff-rs' 
CARGO_PKG_LICENSE='MIT OR Apache-2.0' CARGO_PKG_LICENSE_FILE='' 
CARGO_PKG_NAME=roff CARGO_PKG_README=README.md 
CARGO_PKG_REPOSITORY='https://github.com/rust-cli/roff-rs' 
CARGO_PKG_RUST_VERSION=1.70 CARGO_PKG_VERSION=0.2.2 CARGO_PKG_VERSION_MAJOR=0 
CARGO_PKG_VERSION_MINOR=2 CARGO_PKG_VERSION_PATCH=2 CARGO_PKG_VERSION_PRE='' 
LD_LIBRARY_PATH=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps 
/usr/local/bin/rustc --crate-name roff --edition=2021 
/wrkdirs/usr/ports/biology/coverm/work/CoverM-0.7.0/cargo-crates/roff-0.2.2/src/lib.rs
 --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat 
--crate-type lib --emit=dep-info,metadata,link -C opt-level=3 -C pan
ic=abort -C linker-plugin-lto -C codegen-units=1 
'--warn=clippy::zero_sized_map_values' '--warn=clippy::wildcard_imports' 
'--warn=clippy::verbose_file_reads' --warn=unused_qualifications 
--warn=unused_macro_rules --warn=unused_lifetimes --warn=unsafe_op_in_unsafe_fn 
--warn=unreachable_pub '--warn=clippy::trait_duplication_in_bounds' 
'--warn=clippy::todo' '--warn=clippy::string_to_string' 
'--warn=clippy::string_lit_as_bytes' '--warn=clippy::string_add_assign' 
'--warn=clippy::string_add' '--warn=clippy::str_to_string' 
'--warn=clippy::single_match_else' 
'--warn=clippy::semicolon_if_nothing_returned' 
'--warn=clippy::self_named_module_files' 
'--warn=clippy::same_functions_in_if_condition' --warn=rust_2018_idioms 
'--warn=clippy::rest_pat_in_fully_bound_structs' 
'--warn=clippy::ref_option_ref' '--warn=clippy::redundant_feature_names' 
'--warn=clippy::rc_mutex' '--warn=clippy::ptr_as_ptr' 
'--warn=clippy::path_buf_push_overwrite' 
'--warn=clippy::negative_feature_names' '--warn=clippy:
:needless_for_each' '--warn=clippy::needless_continue' 
'--warn=clippy::mutex_integer' '--warn=clippy::mem_forget' 
'--warn=clippy::match_wildcard_for_single_variants' 
'--warn=clippy::macro_use_imports' '--warn=clippy::lossy_float_literal' 
'--warn=clippy::linkedlist' '--allow=clippy::let_and_return' 
'--warn=clippy::large_types_passed_by_value' 
'--warn=clippy::large_stack_arrays' '--warn=clippy::large_digit_groups' 
'--warn=clippy::items_after_statements' 
'--warn=clippy::invalid_upcast_comparisons' '--warn=clippy::infinite_loop' 
'--warn=clippy::inefficient_to_string' 
'--warn=clippy::inconsistent_struct_constructor' 
'--warn=clippy::imprecise_flops' '--warn=clippy::implicit_clone' 
'--allow=clippy::if_same_then_else' 
'--warn=clippy::from_iter_instead_of_collect' 
'--warn=clippy::fn_params_excessive_bools' '--warn=clippy::float_cmp_const' 
'--warn=clippy::flat_map_option' '--warn=clippy::filter_map_next' 
'--warn=clippy::fallible_impl_from' '--warn=clippy::explicit_into_iter_loop' 
'--w
arn=clippy::explicit_deref_methods' '--warn=clippy::expl_impl_clone_on_copy' 
'--warn=clippy::enum_glob_use' '--warn=clippy::empty_enum' 
'--warn=clippy::doc_markdown' '--warn=clippy::debug_assert_with_mut_call' 
'--warn=clippy::dbg_macro' '--warn=clippy::create_dir' 
'--allow=clippy::collapsible_else_if' '--warn=clippy::checked_conversions' 
'--allow=clippy::branches_sharing_code' 
'--allow=clippy::bool_assert_comparison' --check-cfg 'cfg(docsrs)' --check-cfg 
'cfg(feature, values())' -C metadata=206f245405d3aa68 -C 
extra-filename=-206f245405d3aa68 --out-dir 
/wrkdirs/usr/ports/biology/coverm/work/target/release/deps -C strip=symbols -L 
dependency=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps 
--cap-lints warn -C target-cpu= -C link-arg=-fstack-protector-strong`
[hts-sys 2.1.4] exit status: 0
[hts-sys 2.1.4] exit status: 0
[hts-sys 2.1.4] exit status: 0
[hts-sys 2.1.4] exit status: 0
[hts-sys 2.1.4] cargo:rerun-if-env-changed=AR_aarch64-unknown-freebsd
[hts-sys 2.1.4] AR_aarch64-unknown-freebsd = None
[hts-sys 2.1.4] cargo:rerun-if-env-changed=AR_aarch64_unknown_freebsd
[hts-sys 2.1.4] AR_aarch64_unknown_freebsd = None
[hts-sys 2.1.4] cargo:rerun-if-env-changed=HOST_AR
[hts-sys 2.1.4] HOST_AR = None
[hts-sys 2.1.4] cargo:rerun-if-env-changed=AR
[hts-sys 2.1.4] AR = None
[hts-sys 2.1.4] cargo:rerun-if-env-changed=ARFLAGS_aarch64-unknown-freebsd
[hts-sys 2.1.4] ARFLAGS_aarch64-unknown-freebsd = None
[hts-sys 2.1.4] cargo:rerun-if-env-changed=ARFLAGS_aarch64_unknown_freebsd
[hts-sys 2.1.4] ARFLAGS_aarch64_unknown_freebsd = None
[hts-sys 2.1.4] cargo:rerun-if-env-changed=HOST_ARFLAGS
[hts-sys 2.1.4] HOST_ARFLAGS = None
[hts-sys 2.1.4] cargo:rerun-if-env-changed=ARFLAGS
[hts-sys 2.1.4] ARFLAGS = None
[hts-sys 2.1.4] cargo:rustc-link-lib=static=hts
[hts-sys 2.1.4] 
cargo:rustc-link-search=native=/wrkdirs/usr/ports/biology/coverm/work/target/release/build/hts-sys-4b4ad379bf8dca46/out
[hts-sys 2.1.4] cargo:rerun-if-changed=linux_prebuilt_bindings.rs
[hts-sys 2.1.4] 
cargo:root=/wrkdirs/usr/ports/biology/coverm/work/target/release/build/hts-sys-4b4ad379bf8dca46/out
[hts-sys 2.1.4] 
cargo:include=/wrkdirs/usr/ports/biology/coverm/work/target/release/build/hts-sys-4b4ad379bf8dca46/out/include
[hts-sys 2.1.4] 
cargo:libdir=/wrkdirs/usr/ports/biology/coverm/work/target/release/build/hts-sys-4b4ad379bf8dca46/out
[hts-sys 2.1.4] cargo:rerun-if-changed=wrapper.c
[hts-sys 2.1.4] cargo:rerun-if-changed=wrapper.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/bcf_sr_sort.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/fuzz_settings.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/header.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/hfile_internal.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/hts_internal.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/hts_time_funcs.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/sam_internal.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/textutils_internal.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/thread_pool_internal.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/cram/cram.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/cram/cram_codecs.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/cram/cram_decode.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/cram/cram_encode.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/cram/cram_index.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/cram/cram_io.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/cram/cram_samtools.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/cram/cram_stats.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/cram/cram_structs.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/cram/mFILE.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/cram/misc.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/cram/open_trace_file.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/cram/os.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/cram/pooled_alloc.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/cram/string_alloc.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/bgzf.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/cram.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/faidx.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/hfile.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/hts.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/hts_defs.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/hts_endian.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/hts_expr.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/hts_log.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/hts_os.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/kbitset.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/kfunc.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/khash.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/khash_str2int.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/klist.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/knetfile.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/kroundup.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/kseq.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/ksort.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/kstring.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/regidx.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/sam.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/synced_bcf_reader.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/tbx.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/thread_pool.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/vcf.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/vcf_sweep.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/htslib/vcfutils.h
[hts-sys 2.1.4] cargo:rerun-if-changed=htslib/os/lzma_stub.h
     Running `CARGO=/usr/local/bin/cargo CARGO_CRATE_NAME=hts_sys 
CARGO_MANIFEST_DIR=/wrkdirs/usr/ports/biology/coverm/work/CoverM-0.7.0/cargo-crates/hts-sys-2.1.4
 CARGO_PKG_AUTHORS='Christopher Schröder 
<christopher.schroe...@tu-dortmund.de>:Johannes Köster 
<johannes.koes...@tu-dortmund.de>' CARGO_PKG_DESCRIPTION='This library provides 
HTSlib bindings.' CARGO_PKG_HOMEPAGE='' CARGO_PKG_LICENSE=MIT 
CARGO_PKG_LICENSE_FILE='' CARGO_PKG_NAME=hts-sys CARGO_PKG_README=README.md 
CARGO_PKG_REPOSITORY='https://github.com/samtools/htslib.git' 
CARGO_PKG_RUST_VERSION='' CARGO_PKG_VERSION=2.1.4 CARGO_PKG_VERSION_MAJOR=2 
CARGO_PKG_VERSION_MINOR=1 CARGO_PKG_VERSION_PATCH=4 CARGO_PKG_VERSION_PRE='' 
LD_LIBRARY_PATH=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps 
OUT_DIR=/wrkdirs/usr/ports/biology/coverm/work/target/release/build/hts-sys-4b4ad379bf8dca46/out
 /usr/local/bin/rustc --crate-name hts_sys --edition=2018 
/wrkdirs/usr/ports/biology/coverm/work/CoverM-0.7.0/cargo-crates/h
ts-sys-2.1.4/src/lib.rs --error-format=json 
--json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib 
--emit=dep-info,metadata,link -C opt-level=3 -C panic=abort -C 
linker-plugin-lto -C codegen-units=1 --check-cfg 'cfg(docsrs)' --check-cfg 
'cfg(feature, values("bindgen", "bzip2", "bzip2-sys", "curl", "curl-sys", 
"default", "gcs", "libdeflate", "libdeflate-sys", "lzma", "lzma-sys", 
"openssl-sys", "s3", "static"))' -C metadata=9c31d8f88e8e2914 -C 
extra-filename=-9c31d8f88e8e2914 --out-dir 
/wrkdirs/usr/ports/biology/coverm/work/target/release/deps -C strip=symbols -L 
dependency=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps --extern 
libz_sys=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/liblibz_sys-ccae13e4e043aaab.rmeta
 --cap-lints warn -C target-cpu= -C link-arg=-fstack-protector-strong -L 
native=/wrkdirs/usr/ports/biology/coverm/work/target/release/build/hts-sys-4b4ad379bf8dca46/out
 -l static=hts -L native=/wrkdirs/usr/ports/biology/
coverm/work/target/release/build/libz-sys-082060cb9d62b814/out/lib -L 
native=/wrkdirs/usr/ports/biology/coverm/work/target/release/build/libz-sys-082060cb9d62b814/out/lib64`
   Compiling rust-htslib v0.44.1
     Running `CARGO=/usr/local/bin/cargo CARGO_CRATE_NAME=rust_htslib 
CARGO_MANIFEST_DIR=/wrkdirs/usr/ports/biology/coverm/work/CoverM-0.7.0/cargo-crates/rust-htslib-0.44.1
 CARGO_PKG_AUTHORS='Christopher Schröder 
<christopher.schroe...@tu-dortmund.de>:Johannes Köster 
<johannes.koes...@tu-dortmund.de>' CARGO_PKG_DESCRIPTION='This library provides 
HTSlib bindings and a high level Rust API for reading and writing BAM files.' 
CARGO_PKG_HOMEPAGE='' CARGO_PKG_LICENSE=MIT CARGO_PKG_LICENSE_FILE='' 
CARGO_PKG_NAME=rust-htslib CARGO_PKG_README=README.md 
CARGO_PKG_REPOSITORY='https://github.com/rust-bio/rust-htslib.git' 
CARGO_PKG_RUST_VERSION='' CARGO_PKG_VERSION=0.44.1 CARGO_PKG_VERSION_MAJOR=0 
CARGO_PKG_VERSION_MINOR=44 CARGO_PKG_VERSION_PATCH=1 CARGO_PKG_VERSION_PRE='' 
LD_LIBRARY_PATH=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps 
/usr/local/bin/rustc --crate-name rust_htslib --edition=2018 
/wrkdirs/usr/ports/biology/coverm/work/CoverM-0.7.0/cargo-crates/rust-htslib-0.
44.1/src/lib.rs --error-format=json 
--json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib 
--emit=dep-info,metadata,link -C opt-level=3 -C panic=abort -C 
linker-plugin-lto -C codegen-units=1 --check-cfg 'cfg(docsrs)' --check-cfg 
'cfg(feature, values("bindgen", "bzip2", "curl", "default", "gcs", 
"libdeflate", "lzma", "s3", "serde", "serde_bytes", "serde_feature", 
"static"))' -C metadata=b830581374d33150 -C extra-filename=-b830581374d33150 
--out-dir /wrkdirs/usr/ports/biology/coverm/work/target/release/deps -C 
strip=symbols -L 
dependency=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps --extern 
bio_types=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/libbio_types-192992197a339a01.rmeta
 --extern 
byteorder=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/libbyteorder-2cadf277e1149948.rmeta
 --extern 
custom_derive=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/libcustom_derive-d9759bfbc305359d.rmeta
 --extern derive_ne
w=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/libderive_new-68ba6804c1ede7db.so
 --extern 
hts_sys=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/libhts_sys-9c31d8f88e8e2914.rmeta
 --extern 
ieee754=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/libieee754-40958a4ad43649b4.rmeta
 --extern 
lazy_static=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/liblazy_static-a46b912a5f7c3eb3.rmeta
 --extern 
libc=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/liblibc-b8a665b29b8f01aa.rmeta
 --extern 
linear_map=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/liblinear_map-8cb00a557bd2f102.rmeta
 --extern 
newtype_derive=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/libnewtype_derive-5f764ab46381fdea.rmeta
 --extern 
regex=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/libregex-2c90b3c3726e333b.rmeta
 --extern 
thiserror=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/libthiserror-c2c283808a37a4e
9.rmeta --extern 
url=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/liburl-b6d1c45bd2009e27.rmeta
 --cap-lints warn -C target-cpu= -C link-arg=-fstack-protector-strong -L 
native=/wrkdirs/usr/ports/biology/coverm/work/target/release/build/hts-sys-4b4ad379bf8dca46/out
 -L 
native=/wrkdirs/usr/ports/biology/coverm/work/target/release/build/libz-sys-082060cb9d62b814/out/lib
 -L 
native=/wrkdirs/usr/ports/biology/coverm/work/target/release/build/libz-sys-082060cb9d62b814/out/lib64`
error[E0308]: mismatched types
    --> 
/wrkdirs/usr/ports/biology/coverm/work/CoverM-0.7.0/cargo-crates/rust-htslib-0.44.1/src/bam/record.rs:2324:17
     |
2319 |             let ret = hts_sys::bam_mods_query_type(
     |                       ---------------------------- arguments to this 
function are incorrect
...
2324 |                 &mut canonical,
     |                 ^^^^^^^^^^^^^^ expected `*mut u8`, found `&mut i8`
     |
     = note:    expected raw pointer `*mut u8`
             found mutable reference `&mut i8`
note: function defined here
    --> 
/wrkdirs/usr/ports/biology/coverm/work/target/release/build/hts-sys-4b4ad379bf8dca46/out/bindings.rs:9439:12
     |
9439 |     pub fn bam_mods_query_type(
     |            ^^^^^^^^^^^^^^^^^^^

For more information about this error, try `rustc --explain E0308`.
error: could not compile `rust-htslib` (lib) due to 1 previous error

Caused by:
  process didn't exit successfully: `CARGO=/usr/local/bin/cargo 
CARGO_CRATE_NAME=rust_htslib 
CARGO_MANIFEST_DIR=/wrkdirs/usr/ports/biology/coverm/work/CoverM-0.7.0/cargo-crates/rust-htslib-0.44.1
 CARGO_PKG_AUTHORS='Christopher Schröder 
<christopher.schroe...@tu-dortmund.de>:Johannes Köster 
<johannes.koes...@tu-dortmund.de>' CARGO_PKG_DESCRIPTION='This library provides 
HTSlib bindings and a high level Rust API for reading and writing BAM files.' 
CARGO_PKG_HOMEPAGE='' CARGO_PKG_LICENSE=MIT CARGO_PKG_LICENSE_FILE='' 
CARGO_PKG_NAME=rust-htslib CARGO_PKG_README=README.md 
CARGO_PKG_REPOSITORY='https://github.com/rust-bio/rust-htslib.git' 
CARGO_PKG_RUST_VERSION='' CARGO_PKG_VERSION=0.44.1 CARGO_PKG_VERSION_MAJOR=0 
CARGO_PKG_VERSION_MINOR=44 CARGO_PKG_VERSION_PATCH=1 CARGO_PKG_VERSION_PRE='' 
LD_LIBRARY_PATH=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps 
/usr/local/bin/rustc --crate-name rust_htslib --edition=2018 
/wrkdirs/usr/ports/biology/coverm/work/CoverM-0.7.0/carg
o-crates/rust-htslib-0.44.1/src/lib.rs --error-format=json 
--json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib 
--emit=dep-info,metadata,link -C opt-level=3 -C panic=abort -C 
linker-plugin-lto -C codegen-units=1 --check-cfg 'cfg(docsrs)' --check-cfg 
'cfg(feature, values("bindgen", "bzip2", "curl", "default", "gcs", 
"libdeflate", "lzma", "s3", "serde", "serde_bytes", "serde_feature", 
"static"))' -C metadata=b830581374d33150 -C extra-filename=-b830581374d33150 
--out-dir /wrkdirs/usr/ports/biology/coverm/work/target/release/deps -C 
strip=symbols -L 
dependency=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps --extern 
bio_types=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/libbio_types-192992197a339a01.rmeta
 --extern 
byteorder=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/libbyteorder-2cadf277e1149948.rmeta
 --extern 
custom_derive=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/libcustom_derive-d9759bfbc305359d.r
meta --extern 
derive_new=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/libderive_new-68ba6804c1ede7db.so
 --extern 
hts_sys=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/libhts_sys-9c31d8f88e8e2914.rmeta
 --extern 
ieee754=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/libieee754-40958a4ad43649b4.rmeta
 --extern 
lazy_static=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/liblazy_static-a46b912a5f7c3eb3.rmeta
 --extern 
libc=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/liblibc-b8a665b29b8f01aa.rmeta
 --extern 
linear_map=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/liblinear_map-8cb00a557bd2f102.rmeta
 --extern 
newtype_derive=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/libnewtype_derive-5f764ab46381fdea.rmeta
 --extern 
regex=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/libregex-2c90b3c3726e333b.rmeta
 --extern 
thiserror=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/libth
iserror-c2c283808a37a4e9.rmeta --extern 
url=/wrkdirs/usr/ports/biology/coverm/work/target/release/deps/liburl-b6d1c45bd2009e27.rmeta
 --cap-lints warn -C target-cpu= -C link-arg=-fstack-protector-strong -L 
native=/wrkdirs/usr/ports/biology/coverm/work/target/release/build/hts-sys-4b4ad379bf8dca46/out
 -L 
native=/wrkdirs/usr/ports/biology/coverm/work/target/release/build/libz-sys-082060cb9d62b814/out/lib
 -L 
native=/wrkdirs/usr/ports/biology/coverm/work/target/release/build/libz-sys-082060cb9d62b814/out/lib64`
 (exit status: 1)
*** Error code 101

Stop.
make: stopped in /usr/ports/biology/coverm


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