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Maintainer: [email protected] Log URL: https://pkg-status.freebsd.org/package19/data/142amd64-default-build-as-user/0028b32312ae/logs/py311-pyqubo-1.4.0_3.log Build URL: https://pkg-status.freebsd.org/package19/build.html?mastername=142amd64-default-build-as-user&build=0028b32312ae Log: =>> Building science/py-pyqubo build started at Thu Sep 18 07:26:01 -00 2025 port directory: /usr/ports/science/py-pyqubo package name: py311-pyqubo-1.4.0_3 building for: FreeBSD 142amd64-default-build-as-user-job-13 14.2-RELEASE-p5 FreeBSD 14.2-RELEASE-p5 amd64 maintained by: [email protected] Makefile datestamp: -rw-r--r-- 1 root wheel 1615 Sep 7 00:02 /usr/ports/science/py-pyqubo/Makefile Ports top last git commit: 0028b32312 Ports top unclean checkout: no Port dir last git commit: b304d8ab18 Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.3 Host OSVERSION: 1600000 Jail OSVERSION: 1402000 Job Id: 13 ---Begin Environment--- SHELL=/bin/sh OSVERSION=1402000 UNAME_v=FreeBSD 14.2-RELEASE-p5 UNAME_r=14.2-RELEASE-p5 BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.3 MASTERMNT=/poudriere/data/.m/142amd64-default-build-as-user/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= GID=0 OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 UID=0 PWD=/poudriere/data/.m/142amd64-default-build-as-user/13/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=142amd64-default-build-as-user SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/poudriere/data/.m/142amd64-default-build-as-user/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.3 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR=py311 MAKE_ARGS= FLAVOR=py311 ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- [email protected] --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PYTHON="/usr/local/bin/python3.11" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-pyqubo/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-pyqubo/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-pyqubo/work-py311/.cache HOME=/wrkdirs/usr/ports/science/py-pyqubo/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-pyqubo/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-pyqubo/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-pyqubo/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-pyqubo/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-pyqubo/work-py311/.cache HOME=/wrkdirs/usr/ports/science/py-pyqubo/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-pyqubo/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-pyqubo/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/local/include/cimod -I/usr/local/include/eigen3 " BSD_INSTALL_PR OGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PYTHON_INCLUDEDIR=include/python3.11 PYTHON_LIBDIR=lib/python3.11 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_BASESUFFIX=311 PYTHON_TAG=.cpython-311 PYTHON_SOABI=.cpython-311 PYTHON_VER=3.11 PYTHON_BASEVER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" OSREL=14.2 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/pyqubo" EXAMPLESDIR="share/examples/pyqubo" DATADIR="share/pyqubo" WWWDIR="www/pyqubo" ETCDIR="etc/pyqubo" --End PLIST_SUB-- --SUB_LIST-- PYTHON_INCLUDEDIR=/usr/local/include/python3.11 PYTHON_LIBDIR=/usr/local/lib/python3.11 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=/usr/local/lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_BASESUFFIX=311 PYTHON_TAG=.cpython-311 PYTHON_SOABI=.cpython-311 PYTHON_VER=3.11 PYTHON_BASEVER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/pyqubo DOCSDIR=/usr/local/share/doc/pyqubo EXAMPLESDIR=/usr/local/share/examples/pyqubo WWWDIR=/usr/local/www/pyqubo ETCDIR=/usr/local/etc/pyqubo --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles FORCE_PACKAGE=yes PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### # Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs MAKE_JOBS_NUMBER=3 #### Misc Poudriere #### .include "/etc/make.conf.ports_env" ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited pipebuf (-y) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> License APACHE20 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-pyqubo-1.4.0_3 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-2.3.1.pkg [142amd64-default-build-as-user-job-13] Installing pkg-2.3.1... [142amd64-default-build-as-user-job-13] Extracting pkg-2.3.1: .......... done ===> py311-pyqubo-1.4.0_3 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py311-pyqubo-1.4.0_3 =========================================================================== =======================<phase: fetch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: fetch >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License APACHE20 accepted by the user ===> Fetching all distfiles required by py311-pyqubo-1.4.0_3 for building =========================================================================== =======================<phase: checksum >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License APACHE20 accepted by the user ===> Fetching all distfiles required by py311-pyqubo-1.4.0_3 for building => SHA256 Checksum OK for recruit-communications-pyqubo-1.4.0_GH0.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: extract >============================ ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> License APACHE20 accepted by the user ===> Fetching all distfiles required by py311-pyqubo-1.4.0_3 for building ===> Extracting for py311-pyqubo-1.4.0_3 => SHA256 Checksum OK for recruit-communications-pyqubo-1.4.0_GH0.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: patch >============================ ===== env: NO_DEPENDS=yes USER=nobody UID=65534 GID=65534 ===> Patching for py311-pyqubo-1.4.0_3 ===> Applying FreeBSD patches for py311-pyqubo-1.4.0_3 from /usr/ports/science/py-pyqubo/files =========================================================================== =======================<phase: build-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-pyqubo-1.4.0_3 depends on package: py311-deprecated>=1.2.10 - not found ===> Installing existing package /packages/All/py311-deprecated-1.2.18.pkg [142amd64-default-build-as-user-job-13] Installing py311-deprecated-1.2.18... [142amd64-default-build-as-user-job-13] `-- Installing py311-wrapt-1.17.3... [142amd64-default-build-as-user-job-13] | `-- Installing python311-3.11.13_1... [142amd64-default-build-as-user-job-13] | | `-- Installing gettext-runtime-0.23.1... [142amd64-default-build-as-user-job-13] | | `-- Installing indexinfo-0.3.1_1... [142amd64-default-build-as-user-job-13] | | `-- Extracting indexinfo-0.3.1_1: .... done [142amd64-default-build-as-user-job-13] | | `-- Extracting gettext-runtime-0.23.1: .......... done [142amd64-default-build-as-user-job-13] | | `-- Installing libffi-3.5.1... [142amd64-default-build-as-user-job-13] | | `-- Extracting libffi-3.5.1: .......... done [142amd64-default-build-as-user-job-13] | | `-- Installing mpdecimal-4.0.1... [142amd64-default-build-as-user-job-13] | | `-- Extracting mpdecimal-4.0.1: .......... done [142amd64-default-build-as-user-job-13] | | `-- Installing readline-8.2.13_2... [142amd64-default-build-as-user-job-13] | | `-- Extracting readline-8.2.13_2: .......... done [142amd64-default-build-as-user-job-13] | `-- Extracting python311-3.11.13_1: .......... done [142amd64-default-build-as-user-job-13] `-- Extracting py311-wrapt-1.17.3: .......... done [142amd64-default-build-as-user-job-13] Extracting py311-deprecated-1.2.18: .......... done ===== Message from python311-3.11.13_1: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py311-gdbm databases/py-gdbm@py311 py311-sqlite3 databases/py-sqlite3@py311 py311-tkinter x11-toolkits/py-tkinter@py311 ===> py311-pyqubo-1.4.0_3 depends on package: py311-deprecated>=1.2.10 - found <snip> [142amd64-default-build-as-user-job-13] | | `-- Extracting py311-pyyaml-6.0.1_1: .......... done [142amd64-default-build-as-user-job-13] | | `-- Installing py311-scikit-sparse-0.4.16_1... [142amd64-default-build-as-user-job-13] | | `-- Installing py311-scipy-1.11.1_4,1... [142amd64-default-build-as-user-job-13] | | | `-- Installing blas-3.12.1... [142amd64-default-build-as-user-job-13] | | | `-- Extracting blas-3.12.1: ........ done [142amd64-default-build-as-user-job-13] | | `-- Extracting py311-scipy-1.11.1_4,1: .......... done [142amd64-default-build-as-user-job-13] | | `-- Extracting py311-scikit-sparse-0.4.16_1: .......... done [142amd64-default-build-as-user-job-13] | `-- Extracting py311-networkx-3.5_3,2: .......... done [142amd64-default-build-as-user-job-13] | `-- Installing py311-reno-4.1.0_2... [142amd64-default-build-as-user-job-13] | | `-- Installing py311-dulwich-0.22.8_4... [142amd64-default-build-as-user-job-13] | | `-- Installing py311-urllib3-1.26.20,1... [142amd64-default-build-as-user-job-13] | | | `-- Installing py311-pysocks-1.7.1_1... [142amd64-default-build-as-user-job-13] | | | `-- Extracting py311-pysocks-1.7.1_1: .......... done [142amd64-default-build-as-user-job-13] | | `-- Extracting py311-urllib3-1.26.20,1: .......... done [142amd64-default-build-as-user-job-13] | | `-- Extracting py311-dulwich-0.22.8_4: .......... done [142amd64-default-build-as-user-job-13] | | `-- Installing py311-pbr-7.0.1... [142amd64-default-build-as-user-job-13] | | `-- Extracting py311-pbr-7.0.1: .......... done [142amd64-default-build-as-user-job-13] | `-- Extracting py311-reno-4.1.0_2: .......... done [142amd64-default-build-as-user-job-13] `-- Extracting py311-dwave-samplers-1.3.0_2: .......... done [142amd64-default-build-as-user-job-13] Extracting py311-dwave-neal-0.6.0_3: .......... done ==> Running trigger: fontconfig.ucl Running fc-cache to build fontconfig cache... ==> Running trigger: gdk-pixbuf-query-loaders.ucl Generating gdk-pixbuf modules cache ==> Running trigger: gio-modules.ucl Generating GIO modules cache ==> Running trigger: glib-schemas.ucl Compiling glib schemas No schema files found: doing nothing. ==> Running trigger: shared-mime-info.ucl Building the Shared MIME-Info database cache ===== Message from boost-libs-1.88.0_2: -- You have built the Boost library with thread support. Don't forget to add -pthread to your linker options when linking your code. ===== Message from freetype2-2.13.3: -- The 2.7.x series now uses the new subpixel hinting mode (V40 port's option) as the default, emulating a modern version of ClearType. This change inevitably leads to different rendering results, and you might change port's options to adapt it to your taste (or use the new "FREETYPE_PROPERTIES" environment variable). The environment variable "FREETYPE_PROPERTIES" can be used to control the driver properties. Example: FREETYPE_PROPERTIES=truetype:interpreter-version=35 \ cff:no-stem-darkening=1 \ autofitter:warping=1 This allows to select, say, the subpixel hinting mode at runtime for a given application. If LONG_PCF_NAMES port's option was enabled, the PCF family names may include the foundry and information whether they contain wide characters. For example, "Sony Fixed" or "Misc Fixed Wide", instead of "Fixed". This can be disabled at run time with using pcf:no-long-family-names property, if needed. Example: FREETYPE_PROPERTIES=pcf:no-long-family-names=1 How to recreate fontconfig cache with using such environment variable, if needed: # env FREETYPE_PROPERTIES=pcf:no-long-family-names=1 fc-cache -fsv The controllable properties are listed in the section "Controlling FreeType Modules" in the reference's table of contents (/usr/local/share/doc/freetype2/reference/index.html, if documentation was installed). ===== Message from postgresql17-client-17.6_1: -- The PostgreSQL port has a collection of "side orders": postgresql-docs For all of the html documentation p5-Pg A perl5 API for client access to PostgreSQL databases. postgresql-tcltk If you want tcl/tk client support. postgresql-jdbc For Java JDBC support. postgresql-odbc For client access from unix applications using ODBC as access method. Not needed to access unix PostgreSQL servers from Win32 using ODBC. See below. ruby-postgres, py-psycopg For client access to PostgreSQL databases using the ruby & python languages. postgresql-plperl, postgresql-pltcl & postgresql-plruby For using perl5, tcl & ruby as procedural languages. postgresql-contrib Lots of contributed utilities, postgresql functions and datatypes. There you find pg_standby, pgcrypto and many other cool things. etc... ===== Message from libinotify-20240724_3: -- You might want to consider increasing the kern.maxfiles tunable if you plan to use this library for applications that need to monitor activity of a lot of files. ===== Message from libimagequant-4.3.4_5: -- ===> NOTICE: The libimagequant port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===== Message from libraqm-0.10.2: -- ===> NOTICE: The libraqm port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===== Message from py311-pandas-2.2.3_2,1: -- Install math/py-statsmodels to enable parts of pandas.stats. Install devel/py-xarray to enable the to_xarray() function. ===== Message from py311-urllib3-1.26.20,1: -- Since version 1.25 HTTPS connections are now verified by default which is done via "cert_reqs = 'CERT_REQUIRED'". While certificate verification can be disabled via "cert_reqs = 'CERT_NONE'", it's highly recommended to leave it on. Various consumers of net/py-urllib3 already have implemented routines that either explicitly enable or disable HTTPS certificate verification (e.g. via configuration settings, CLI arguments, etc.). Yet it may happen that there are still some consumers which don't explicitly enable/disable certificate verification for HTTPS connections which could then lead to errors (as is often the case with self-signed certificates). In case of an error one should try first to temporarily disable certificate verification of the problematic urllib3 consumer to see if that approach will remedy the issue. ===> py311-pyqubo-1.4.0_3 depends on package: py311-dwave-neal>=0.5.7 - found ===> Returning to build of py311-pyqubo-1.4.0_3 ===> py311-pyqubo-1.4.0_3 depends on package: py311-numpy>=1.16,1<1.27,1 - found ===> py311-pyqubo-1.4.0_3 depends on package: py311-six>=1.15.0 - found ===> py311-pyqubo-1.4.0_3 depends on package: py311-nbsphinx>=0.8.3 - not found ===> Installing existing package /packages/All/py311-nbsphinx-0.9.7.pkg [142amd64-default-build-as-user-job-13] Installing py311-nbsphinx-0.9.7... [142amd64-default-build-as-user-job-13] `-- Installing py311-Jinja2-3.1.6... [142amd64-default-build-as-user-job-13] | `-- Installing py311-Babel-2.17.0_1... [142amd64-default-build-as-user-job-13] | `-- Extracting py311-Babel-2.17.0_1: .......... done [142amd64-default-build-as-user-job-13] | `-- Installing py311-markupsafe-3.0.2... [142amd64-default-build-as-user-job-13] | `-- Extracting py311-markupsafe-3.0.2: .......... done [142amd64-default-build-as-user-job-13] `-- Extracting py311-Jinja2-3.1.6: .......... done [142amd64-default-build-as-user-job-13] `-- Installing py311-docutils-0.21.2,1... [142amd64-default-build-as-user-job-13] `-- Extracting py311-docutils-0.21.2,1: .......... done [142amd64-default-build-as-user-job-13] `-- Installing py311-nbconvert-7.16.6... [142amd64-default-build-as-user-job-13] | `-- Installing py311-beautifulsoup-4.13.4_1... [142amd64-default-build-as-user-job-13] | | `-- Installing py311-html5lib-1.1_1... [142amd64-default-build-as-user-job-13] | | `-- Installing py311-webencodings-0.5.1_1... [142amd64-default-build-as-user-job-13] | | `-- Extracting py311-webencodings-0.5.1_1: .......... done [142amd64-default-build-as-user-job-13] | | `-- Extracting py311-html5lib-1.1_1: .......... done [142amd64-default-build-as-user-job-13] | | `-- Installing py311-lxml5-5.4.0_2... pkg-static: py311-lxml5-5.4.0_2 conflicts with py311-lxml-6.0.1 (installs files into the same place). Problematic file: /usr/local/lib/python3.11/site-packages/lxml/ElementInclude.py Failed to install the following 1 package(s): /packages/All/py311-nbsphinx-0.9.7.pkg *** Error code 1 Stop. make: stopped in /usr/ports/science/py-pyqubo
