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Maintainer: [email protected] Log URL: https://pkg-status.freebsd.org/beefy23/data/150amd64-default/a1fb4afca079/logs/nest-3.10.log Build URL: https://pkg-status.freebsd.org/beefy23/build.html?mastername=150amd64-default&build=a1fb4afca079 Log: =>> Building science/nest build started at Sat Jun 27 05:20:03 UTC 2026 port directory: /usr/ports/science/nest package name: nest-3.10 building for: FreeBSD 150amd64-default-job-36 15.0-RELEASE-p10 FreeBSD 15.0-RELEASE-p10 amd64 maintained by: [email protected] Makefile datestamp: -rw-r--r-- 1 root wheel 1521 Jun 11 01:01 /usr/ports/science/nest/Makefile Ports top last git commit: a1fb4afca079fc25d133f0b442dcc141b9d98d5f Ports top unclean checkout: no Port dir last git commit: 61edd3c17ad75743169efcbef9ad26bae2b62552 Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.8 Host OSVERSION: 1600018 Jail OSVERSION: 1500068 Job Id: 36 ---Begin Environment--- SHELL=/bin/sh OSVERSION=1500068 UNAME_v=FreeBSD 15.0-RELEASE-p10 UNAME_r=15.0-RELEASE-p10 BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.8 MASTERMNT=/usr/local/poudriere/data/.m/150amd64-default/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/150amd64-default/36/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=150amd64-default SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/150amd64-default/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.8 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for nest-3.10: DOCS=on: Build and/or install documentation PYTHON=on: Python bindings or support ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- [email protected] --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PKG_CONFIG=pkgconf PYTHON="/usr/local/bin/python3.12" XDG_DATA_HOME=/wrkdirs/usr/ports/science/nest/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/nest/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/nest/work/.cache HOME=/wrkdirs/usr/ports/science/nest/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/nest/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/nest/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- NINJA_STATUS="[%p %s/%t] " XDG_DATA_HOME=/wrkdirs/usr/ports/science/nest/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/nest/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/nest/work/.cache HOME=/wrkdirs/usr/ports/science/nest/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/nest/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/nest/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/science/nest/work/stage PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-I/usr/local/include" LDFLAGS=" -L/usr/local/lib " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BS D_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PORTDOCS="" DOCS="" NO_DOCS="@comment " PYTHON="" NO_PYTHON="@comment " CMAKE_BUILD_TYPE="release" PYTHON_INCLUDEDIR=include/python3.12 PYTHON_LIBDIR=lib/python3.12 PYTHON_PLATFORM=freebsd15 PYTHON_SITELIBDIR=lib/python3.12/site-packages PYTHON_SUFFIX=312 PYTHON_BASESUFFIX=312 PYTHON_TAG=.cpython-312 PYTHON_SOABI=.cpython-312 PYTHON_VER=3.12 PYTHON_BASEVER=3.12 PYTHON_VERSION=python3.12 PYTHON2="@comment " PYTHON3="" OSREL=15.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/nest" EXAMPLESDIR="share/examples/nest" DATADIR="share/nest" WWWDIR="www/nest" ETCDIR="etc/nest" --End PLIST_SUB-- --SUB_LIST-- DOCS="" NO_DOCS="@comment " PYTHON="" NO_PYTHON="@comment " PYTHON_INCLUDEDIR=/usr/local/include/python3.12 PYTHON_LIBDIR=/usr/local/lib/python3.12 PYTHON_PLATFORM=freebsd15 PYTHON_SITELIBDIR=/usr/local/lib/python3.12/site-packages PYTHON_SUFFIX=312 PYTHON_BASESUFFIX=312 PYTHON_TAG=.cpython-312 PYTHON_SOABI=.cpython-312 PYTHON_VER=3.12 PYTHON_BASEVER=3.12 PYTHON_VERSION=python3.12 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/nest DOCSDIR=/usr/local/share/doc/nest EXAMPLESDIR=/usr/local/share/examples/nest WWWDIR=/usr/local/www/nest ETCDIR=/usr/local/etc/nest --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs MAKE_JOBS_NUMBER=3 #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited pipebuf (-y) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License GPLv2 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> nest-3.10 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-2.7.5.pkg [150amd64-default-job-36] Installing pkg-2.7.5... [150amd64-default-job-36] Extracting pkg-2.7.5: .......... done ===> nest-3.10 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of nest-3.10 =========================================================================== =======================<phase: fetch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: fetch >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by nest-3.10 for building =========================================================================== =======================<phase: checksum >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by nest-3.10 for building => SHA256 Checksum OK for nest-nest-simulator-v3.10_GH0.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: extract >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by nest-3.10 for building ===> Extracting for nest-3.10 => SHA256 Checksum OK for nest-nest-simulator-v3.10_GH0.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: patch >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for nest-3.10 ===> Applying FreeBSD patches for nest-3.10 from /usr/ports/science/nest/files =========================================================================== =======================<phase: build-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> nest-3.10 depends on file: /usr/local/bin/cmake - not found ===> Installing existing package /packages/All/cmake-core-3.31.12_1.pkg [150amd64-default-job-36] Installing cmake-core-3.31.12_1... [150amd64-default-job-36] `-- Installing expat-2.8.1... [150amd64-default-job-36] `-- Extracting expat-2.8.1: .......... done [150amd64-default-job-36] `-- Installing jsoncpp-1.9.6_1... [150amd64-default-job-36] `-- Extracting jsoncpp-1.9.6_1: .......... done [150amd64-default-job-36] `-- Installing libidn2-2.3.8... [150amd64-default-job-36] | `-- Installing indexinfo-0.3.1_1... [150amd64-default-job-36] | `-- Extracting indexinfo-0.3.1_1: .... done [150amd64-default-job-36] | `-- Installing libunistring-1.4.2... [150amd64-default-job-36] | `-- Extracting libunistring-1.4.2: .......... done [150amd64-default-job-36] `-- Extracting libidn2-2.3.8: .......... done [150amd64-default-job-36] `-- Installing libuv-1.52.1... [150amd64-default-job-36] `-- Extracting libuv-1.52.1: .......... done [150amd64-default-job-36] `-- Installing rhash-1.4.6... [150amd64-default-job-36] | `-- Installing gettext-runtime-1.0_1... [150amd64-default-job-36] | `-- Extracting gettext-runtime-1.0_1: .......... done [150amd64-default-job-36] `-- Extracting rhash-1.4.6: .......... done [150amd64-default-job-36] Extracting cmake-core-3.31.12_1: .......... done ===> nest-3.10 depends on file: /usr/local/bin/cmake - found <snip> -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/lib/python3.12/site-packages/nest/math/__init__.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/lib/python3.12/site-packages/nest/ll_api.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/lib/python3.12/site-packages/nest/random -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/lib/python3.12/site-packages/nest/random/hl_api_random.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/lib/python3.12/site-packages/nest/random/__init__.py -- Up-to-date: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/lib/python3.12/site-packages/nest -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/lib/python3.12/site-packages/nest/versionchecker.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/glif_psc_double_alpha_neuron.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/eprop_plasticity -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/eprop_plasticity/eprop_supervised_regression_sine-waves_bsshslm_2020.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/eprop_plasticity/README.rst -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/eprop_plasticity/chaos_handwriting.txt -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/eprop_plasticity/eprop_supervised_regression_handwriting_bsshslm_2020.png -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/eprop_plasticity/eprop_supervised_classification_evidence-accumulation_bsshslm_2020.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/eprop_plasticity/eprop_supervised_classification_neuromorphic_mnist.png -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/eprop_plasticity/eprop_supervised_regression_sine-waves_bsshslm_2020.png -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/eprop_plasticity/eprop_supervised_regression_lemniscate_bsshslm_2020.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/eprop_plasticity/eprop_supervised_regression_sine-waves.png -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/eprop_plasticity/eprop_model_relationships.png -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/eprop_plasticity/NMNIST_pixels_blocklist.txt -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/eprop_plasticity/eprop_supervised_regression_handwriting_bsshslm_2020.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/eprop_plasticity/eprop_supervised_classification_evidence-accumulation_bsshslm_2020.png -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/eprop_plasticity/eprop_supervised_classification_neuromorphic_mnist.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/eprop_plasticity/eprop_supervised_regression_lemniscate_bsshslm_2020.png -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/eprop_plasticity/eprop_supervised_regression_sine-waves.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/csa_spatial_example.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/pulsepacket.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/sinusoidal_poisson_generator.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/brunel_delta_nest.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/evaluate_quantal_stp_synapse.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/wang_decision_making.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/brette_gerstner_fig_2c.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/precise_spiking.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/hpc_benchmark.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/README.rst -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/one_neuron.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/sudoku -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/sudoku/helpers_sudoku.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/sudoku/README.rst -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/sudoku/output -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/sudoku/output/sudoku_solution.gif -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/sudoku/output/sudoku_noise_comparison.gif -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/sudoku/output/sudoku_solution.png -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/sudoku/sudoku_net.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/sudoku/plot_progress.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/sudoku/run_example.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/sudoku/sudoku_solver.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/sinusoidal_gamma_generator.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/cross_check_mip_corrdet.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/rate_neuron_dm.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/brunel_alpha_evolution_strategies.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/synapsecollection.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/urbanczik_synapse_example.py -- Installing: /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/doc/nest/examples/pynest/brunel_exp_multisynapse_nest.py -- 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port_git_hash port_checkout_unclean built_by' 'PKG_NOTE_build_timestamp=2026-06-27T05:20:03+0000' 'PKG_NOTE_ports_top_git_hash=a1fb4afca079fc25d133f0b442dcc141b9d98d5f' 'PKG_NOTE_ports_top_checkout_unclean=no' 'PKG_NOTE_port_git_hash=61edd3c17ad75743169efcbef9ad26bae2b62552' 'PKG_NOTE_port_checkout_unclean=no' 'PKG_NOTE_built_by=poudriere-git-3.4.8' NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building packages for nest-3.10 ===> Building nest-3.10 pkg-static: Unable to access file /wrkdirs/usr/ports/science/nest/work/stage/usr/local/share/nest/testsuite/pytests/regressions/test_issue_312.py:No such file or directory *** Error code 1 Stop. make: stopped making "package" in /usr/ports/science/nest
