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Maintainer: p...@freebsd.org Last committer: p...@freebsd.org Ident: $FreeBSD: head/biology/seqtools/Makefile 411109 2016-03-14 19:40:34Z pi $ Log URL: http://beefy1.nyi.freebsd.org/data/93i386-default/411630/logs/seqtools-4.41.1.log Build URL: http://beefy1.nyi.freebsd.org/build.html?mastername=93i386-default&build=411630 Log: ====>> Building biology/seqtools build started at Wed Mar 23 03:10:13 UTC 2016 port directory: /usr/ports/biology/seqtools building for: FreeBSD 93i386-default-job-12 9.3-RELEASE-p39 FreeBSD 9.3-RELEASE-p39 i386 maintained by: p...@freebsd.org Makefile ident: $FreeBSD: head/biology/seqtools/Makefile 411109 2016-03-14 19:40:34Z pi $ Poudriere version: 3.1.12 Host OSVERSION: 1100097 Jail OSVERSION: 903000 ---Begin Environment--- SHELL=/bin/csh UNAME_p=i386 UNAME_m=i386 UNAME_v=FreeBSD 9.3-RELEASE-p39 UNAME_r=9.3-RELEASE-p39 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 SAVED_TERM= MASTERMNT=/usr/local/poudriere/data/.m/93i386-default/ref PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin POUDRIERE_BUILD_TYPE=bulk PKGNAME=seqtools-4.41.1 OLDPWD=/ PWD=/usr/local/poudriere/data/.m/93i386-default/ref/.p/pool MASTERNAME=93i386-default SCRIPTPREFIX=/usr/local/share/poudriere USER=root HOME=/root POUDRIERE_VERSION=3.1.12 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh LIBEXECPREFIX=/usr/local/libexec/poudriere LOCALBASE=/usr/local PACKAGE_BUILDING=yes OSVERSION=903000 ---End Environment--- ---Begin OPTIONS List--- ===> The following configuration options are available for seqtools-4.41.1: DOCS=on: Build and/or install documentation ===> Use 'make config' to modify these settings ---End OPTIONS List--- --CONFIGURE_ARGS-- --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PKG_CONFIG=pkgconf XDG_DATA_HOME=/wrkdirs/usr/ports/biology/seqtools/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/seqtools/work HOME=/wrkdirs/usr/ports/biology/seqtools/work TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144 --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/biology/seqtools/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/seqtools/work HOME=/wrkdirs/usr/ports/biology/seqtools/work TMPDIR="/tmp" NO_PIE=yes WITHOUT_DEBUG_FILES=yes WITHOUT_KERNEL_SYMBOLS=yes SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="gcc" CFLAGS="-O2 -pipe -I/usr/local/include -fno-strict-aliasing" CPP="gcpp" CPPFLAGS="" LDFLAGS=" -L/usr/local/lib -lexecinfo -lcurl -lsqlite3 -lm" LIBS="" CXX="g++" CXXFLAGS="-O2 -pipe -I/usr/local/include -fno-strict-aliasing" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 444" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- GTK2_VERSION="2.10.0" GTK3_VERSION="3.0.0" OSREL=9.3 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib DOCSDIR="share/doc/seqtools" EXAMPLESDIR="share/examples/seqtools" DATADIR="share/seqtools" WWWDIR="www/seqtools" ETCDIR="etc/seqtools" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/seqtools DOCSDIR=/usr/local/share/doc/seqtools EXAMPLESDIR=/usr/local/share/examples/seqtools WWWDIR=/usr/local/www/seqtools ETCDIR=/usr/local/etc/seqtools --End SUB_LIST-- ---Begin make.conf--- MACHINE=i386 MACHINE_ARCH=i386 ARCH=${MACHINE_ARCH} USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles #### /usr/local/etc/poudriere.d/make.conf #### DISABLE_MAKE_JOBS=poudriere ---End make.conf--- =======================<phase: check-sanity >============================ ===> License GPLv3 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> seqtools-4.41.1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.6.4_1.txz [93i386-default-job-12] Installing pkg-1.6.4_1... [93i386-default-job-12] Extracting pkg-1.6.4_1: .......... done ===> seqtools-4.41.1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of seqtools-4.41.1 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by seqtools-4.41.1 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by seqtools-4.41.1 for building => SHA256 Checksum OK for seqtools-4.41.1.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by seqtools-4.41.1 for building ===> Extracting for seqtools-4.41.1 => SHA256 Checksum OK for seqtools-4.41.1.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for seqtools-4.41.1 =========================================================================== =======================<phase: build-depends >============================ ===> seqtools-4.41.1 depends on executable: pkgconf - not found ===> Installing existing package /packages/All/pkgconf-0.9.12_1.txz [93i386-default-job-12] Installing pkgconf-0.9.12_1... [93i386-default-job-12] Extracting pkgconf-0.9.12_1: ....... done ===> seqtools-4.41.1 depends on executable: pkgconf - found ===> Returning to build of seqtools-4.41.1 =========================================================================== =======================<phase: lib-depends >============================ ===> seqtools-4.41.1 depends on shared library: libcurl.so - not found ===> Installing existing package /packages/All/curl-7.47.1.txz [93i386-default-job-12] Installing curl-7.47.1... [93i386-default-job-12] `-- Installing ca_root_nss-3.22.2... [93i386-default-job-12] `-- Extracting ca_root_nss-3.22.2: ....... done [93i386-default-job-12] Extracting curl-7.47.1: .......... done Message from ca_root_nss-3.22.2: ********************************* WARNING ********************************* FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. *********************************** NOTE ********************************** This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem *************************************************************************** ===> seqtools-4.41.1 depends on shared library: libcurl.so - found (/usr/local/lib/libcurl.so) ===> Returning to build of seqtools-4.41.1 ===> seqtools-4.41.1 depends on shared library: libsqlite3.so - not found ===> Installing existing package /packages/All/sqlite3-3.11.1.txz [93i386-default-job-12] Installing sqlite3-3.11.1... [93i386-default-job-12] Extracting sqlite3-3.11.1: .......... done ===> seqtools-4.41.1 depends on shared library: libsqlite3.so - found (/usr/local/lib/libsqlite3.so) ===> Returning to build of seqtools-4.41.1 ===> seqtools-4.41.1 depends on shared library: libexecinfo.so - not found ===> Installing existing package /packages/All/libexecinfo-1.1_3.txz [93i386-default-job-12] Installing libexecinfo-1.1_3... [93i386-default-job-12] Extracting libexecinfo-1.1_3: ..... done ===> seqtools-4.41.1 depends on shared library: libexecinfo.so - found (/usr/local/lib/libexecinfo.so) ===> Returning to build of seqtools-4.41.1 ===> seqtools-4.41.1 depends on shared library: libatk-1.0.so - not found ===> Installing existing package /packages/All/atk-2.18.0.txz [93i386-default-job-12] Installing atk-2.18.0... [93i386-default-job-12] `-- Installing gettext-runtime-0.19.7... [93i386-default-job-12] | `-- Installing indexinfo-0.2.4... [93i386-default-job-12] | `-- Extracting indexinfo-0.2.4: .... done [93i386-default-job-12] | `-- Installing libiconv-1.14_9... [93i386-default-job-12] | `-- Extracting libiconv-1.14_9: .......... done [93i386-default-job-12] `-- Extracting gettext-runtime-0.19.7: .......... done [93i386-default-job-12] `-- Installing glib-2.46.2... [93i386-default-job-12] | `-- Installing python27-2.7.11_1... [93i386-default-job-12] | | `-- Installing libffi-3.2.1... [93i386-default-job-12] | | `-- Extracting libffi-3.2.1: .......... done <snip> checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking dependency style of gcc... gcc3 checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for egrep... (cached) /usr/bin/egrep checking for fgrep... (cached) /usr/bin/fgrep checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... (cached) 262144 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... no checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for ar... ar checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking how to run the C preprocessor... gcpp checking for ANSI C header files... (cached) yes checking for sys/types.h... (cached) yes checking for sys/stat.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for memory.h... (cached) yes checking for strings.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for unistd.h... (cached) yes checking for dlfcn.h... (cached) yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... freebsd9.3 ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... freebsd9.3 ld.so checking how to hardcode library paths into programs... immediate checking how to run the C preprocessor... gcpp checking whether we are using the GNU C++ compiler... (cached) yes checking whether g++ accepts -g... (cached) yes checking dependency style of g++... (cached) gcc3 checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking for arpa/inet.h... (cached) yes checking for netdb.h... (cached) yes checking for netinet/in.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for sys/socket.h... (cached) yes checking for unistd.h... (cached) yes checking gtk.h usability... no checking gtk.h presence... no checking for gtk.h... no checking for pid_t... (cached) yes checking for size_t... (cached) yes checking for vfork.h... (cached) no checking for fork... (cached) yes checking for vfork... (cached) yes checking for working fork... yes checking for working vfork... (cached) yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... (cached) yes checking for dup2... (cached) yes checking for floor... yes checking for gethostbyname... (cached) yes checking for memset... (cached) yes checking for socket... yes checking for sqrt... yes checking for strcasecmp... (cached) yes checking for strchr... yes checking for strcspn... (cached) yes checking for strerror... (cached) yes checking for strncasecmp... (cached) yes checking for strrchr... yes checking for strstr... yes checking for strtol... (cached) yes checking for uname... (cached) yes checking pkg-config is at least version 0.9.0... yes checking for DEPS... yes checking for glib-genmarshal... glib-genmarshal checking curl/curl.h usability... yes checking curl/curl.h presence... no configure: WARNING: curl/curl.h: accepted by the compiler, rejected by the preprocessor! configure: WARNING: curl/curl.h: proceeding with the compiler's result checking for curl/curl.h... yes checking execinfo.h usability... yes checking execinfo.h presence... no configure: WARNING: execinfo.h: accepted by the compiler, rejected by the preprocessor! configure: WARNING: execinfo.h: proceeding with the compiler's result checking for execinfo.h... yes configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/include/Makefile config.status: creating src/gbtoolsUtils/Makefile config.status: creating src/gbtoolsGUI/Makefile config.status: creating src/gbtoolsCurl/Makefile config.status: creating src/gbtoolsPfetch/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands ------------------------------------------------- gbtools Version 0.3.0 Prefix: '/usr/local' Compiler: 'g++ -O2 -pipe -I/usr/local/include -fno-strict-aliasing ' Now type 'make [<target>]' where the optional [<target>] is: all - build all libraries (default) install - build and install everything ------------------------------------------------- ------------------------------------------------- SeqTools Version 4.41.1 Prefix: '/usr/local' Compiler: 'gcc -O2 -pipe -I/usr/local/include -fno-strict-aliasing ' Now type 'make [<target>]' where the optional [<target>] is: all - build all binaries (default) install - build and install everything <program> - build specific program ------------------------------------------------- =========================================================================== =======================<phase: build >============================ ===> Building for seqtools-4.41.1 /usr/bin/make all-recursive Making all in . Making all in gbtools /usr/bin/make all-recursive Making all in src Making all in include Making all in gbtoolsUtils Making all in . /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -D_THREAD_SAFE -pthread -I../../src/include -std=c++0x -g -Wall -O2 -pipe -I/usr/local/include -fno-strict-aliasing -MT gbtoolsUtils.lo -MD -MP -MF .deps/gbtoolsUtils.Tpo -c -o gbtoolsUtils.lo gbtoolsUtils.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include/freetype2 -I/usr/local/include/libdrm -I/usr/local/include/libpng16 -I/usr/local/include/harfbuzz -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -D_THREAD_SAFE -pthread -I../../src/include -std=c++0x -g -Wall -O2 -pipe -I/usr/local/include -fno-strict-aliasing -MT gbtoolsUtils.lo -MD -MP -MF .deps/gbtoolsUtils.Tpo -c gbtoolsUtils.cpp -o gbtoolsUtils.o cc1plus: error: unrecognized command line option "-std=c++0x" *** [gbtoolsUtils.lo] Error code 1 Stop in /wrkdirs/usr/ports/biology/seqtools/work/seqtools-4.41.1/gbtools/src/gbtoolsUtils. *** [all-recursive] Error code 1 Stop in /wrkdirs/usr/ports/biology/seqtools/work/seqtools-4.41.1/gbtools/src/gbtoolsUtils. *** [all-recursive] Error code 1 Stop in /wrkdirs/usr/ports/biology/seqtools/work/seqtools-4.41.1/gbtools/src. *** [all-recursive] Error code 1 Stop in /wrkdirs/usr/ports/biology/seqtools/work/seqtools-4.41.1/gbtools. *** [all] Error code 1 Stop in /wrkdirs/usr/ports/biology/seqtools/work/seqtools-4.41.1/gbtools. *** [all-recursive] Error code 1 Stop in /wrkdirs/usr/ports/biology/seqtools/work/seqtools-4.41.1. *** [all] Error code 1 Stop in /wrkdirs/usr/ports/biology/seqtools/work/seqtools-4.41.1. *** [do-build] Error code 1 Stop in /usr/ports/biology/seqtools. _______________________________________________ freebsd-pkg-fallout@freebsd.org mailing list https://lists.freebsd.org/mailman/listinfo/freebsd-pkg-fallout To unsubscribe, send any mail to "freebsd-pkg-fallout-unsubscr...@freebsd.org"
