On 05/11/2016 14:18, Tijl Coosemans wrote:
It's probably caused by pkg not copying hardlinks:
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=213255

On second thoughts, I don't think it was this because the portupgrade tool builds a package, removes the old one then installs the new one. The bug you posted says the problem doesn't happen when one makes the package.

--
J.
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